RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 IGSF3O75054 1194 aa17.48■□□□□ 0.39
VRK3-213ENST00000597215 GLRX3O76003 335 aaKnown RBP17.48■□□□□ 0.39
VRK3-213ENST00000597215 HDLBPQ00341 1268 aaKnown RBP17.48■□□□□ 0.39
VRK3-213ENST00000597215 TTF1Q15361 905 aaPredicted RBP17.48■□□□□ 0.39
VRK3-213ENST00000597215 EAPPQ56P03 285 aaPredicted RBP17.48■□□□□ 0.39
VRK3-213ENST00000597215 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
VRK3-213ENST00000597215 TSHZ3Q63HK5 1081 aa17.48■□□□□ 0.39
VRK3-213ENST00000597215 TBC1D9Q6ZT07 1266 aa17.48■□□□□ 0.39
VRK3-213ENST00000597215 DZIP1Q86YF9 867 aaKnown RBP17.48■□□□□ 0.39
VRK3-213ENST00000597215 TRPM4Q8TD43 1214 aa17.48■□□□□ 0.39
VRK3-213ENST00000597215 HAUS7Q99871 368 aa17.48■□□□□ 0.39
VRK3-213ENST00000597215 LRP2BPQ9P2M1 347 aa17.48■□□□□ 0.39
VRK3-213ENST00000597215 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
VRK3-213ENST00000597215 SERPINA10Q9UK55 444 aa17.48■□□□□ 0.39
VRK3-213ENST00000597215 MAST2Q6P0Q8 1798 aa17.48■□□□□ 0.39
VRK3-213ENST00000597215 DOCK2Q92608 1830 aa17.47■□□□□ 0.39
VRK3-213ENST00000597215 PDE1AP54750 535 aa17.47■□□□□ 0.39
VRK3-213ENST00000597215 DLGAP5Q15398 846 aa17.47■□□□□ 0.39
VRK3-213ENST00000597215 MTMR14Q8NCE2 650 aa17.47■□□□□ 0.39
VRK3-213ENST00000597215 TEKT1Q969V4 418 aa17.47■□□□□ 0.39
VRK3-213ENST00000597215 MRIQ9BWK5 157 aa17.47■□□□□ 0.39
VRK3-213ENST00000597215 RAI14Q9P0K7 980 aa17.47■□□□□ 0.39
VRK3-213ENST00000597215 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
VRK3-213ENST00000597215 AOX1Q06278 1338 aa17.47■□□□□ 0.39
VRK3-213ENST00000597215 MYO5AQ9Y4I1 1855 aaKnown RBP17.46■□□□□ 0.39
VRK3-213ENST00000597215 ADAMTSL1Q8N6G6 1762 aa17.46■□□□□ 0.39
VRK3-213ENST00000597215 GOLIM4O00461 696 aa17.46■□□□□ 0.39
VRK3-213ENST00000597215 EGFRP00533 1210 aa17.46■□□□□ 0.39
VRK3-213ENST00000597215 CRKP46108 304 aa17.46■□□□□ 0.39
VRK3-213ENST00000597215 RBM5P52756 815 aaKnown RBP eCLIP17.46■□□□□ 0.39
VRK3-213ENST00000597215 CFAP100Q494V2 611 aa17.46■□□□□ 0.39
VRK3-213ENST00000597215 LDHDQ86WU2 507 aa17.46■□□□□ 0.39
VRK3-213ENST00000597215 SLF2Q8IX21 1173 aa17.46■□□□□ 0.39
VRK3-213ENST00000597215 PI4K2BQ8TCG2 481 aa17.46■□□□□ 0.39
VRK3-213ENST00000597215 PIH1D3Q9NQM4 214 aaKnown RBP17.46■□□□□ 0.39
VRK3-213ENST00000597215 PAG1Q9NWQ8 432 aa17.46■□□□□ 0.39
VRK3-213ENST00000597215 MYH2Q9UKX2 1941 aa17.45■□□□□ 0.38
VRK3-213ENST00000597215 GSTO1P78417 241 aa17.45■□□□□ 0.38
VRK3-213ENST00000597215 HHIPL2Q6UWX4 724 aa17.45■□□□□ 0.38
VRK3-213ENST00000597215 PLEKHM2Q8IWE5 1019 aa17.45■□□□□ 0.38
VRK3-213ENST00000597215 ZC3H15Q8WU90 426 aaKnown RBP17.45■□□□□ 0.38
VRK3-213ENST00000597215 ANTXR1Q9H6X2 564 aa17.45■□□□□ 0.38
VRK3-213ENST00000597215 ECM29Q5VYK3 1845 aa17.44■□□□□ 0.38
VRK3-213ENST00000597215 IDH1O75874 414 aaKnown RBP17.44■□□□□ 0.38
VRK3-213ENST00000597215 HIRAP54198 1017 aaPredicted RBP17.44■□□□□ 0.38
VRK3-213ENST00000597215 MECOMQ03112 1051 aa17.44■□□□□ 0.38
VRK3-213ENST00000597215 MAP3K12Q12852 859 aa17.44■□□□□ 0.38
VRK3-213ENST00000597215 NSUN4Q96CB9 384 aaKnown RBP17.44■□□□□ 0.38
VRK3-213ENST00000597215 ZBED3Q96IU2 234 aaPredicted RBP17.44■□□□□ 0.38
VRK3-213ENST00000597215 ZDHHC15Q96MV8 337 aa17.44■□□□□ 0.38
VRK3-213ENST00000597215 OSBPL3Q9H4L5 887 aa17.44■□□□□ 0.38
VRK3-213ENST00000597215 CLEC11AQ9Y240 323 aa17.44■□□□□ 0.38
VRK3-213ENST00000597215 SPDYE2BA6NHP3 402 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 WNT10BO00744 389 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 MYO1BO43795 1136 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 LDHCP07864 332 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 POTEJP0CG39 1038 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 SPDYE6P0CI01 402 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 PDE4AP27815 886 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 DIXDC1Q155Q3 683 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 TMED8Q6PL24 325 aaPredicted RBP17.43■□□□□ 0.38
VRK3-213ENST00000597215 EDC3Q96F86 508 aaKnown RBP17.43■□□□□ 0.38
VRK3-213ENST00000597215 MYH7P12883 1935 aa17.43■□□□□ 0.38
VRK3-213ENST00000597215 TOMM70O94826 608 aa17.42■□□□□ 0.38
VRK3-213ENST00000597215 NBPF9Q3BBW0 867 aa17.42■□□□□ 0.38
VRK3-213ENST00000597215 NAA16Q6N069 864 aaPredicted RBP17.42■□□□□ 0.38
VRK3-213ENST00000597215 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
VRK3-213ENST00000597215 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
VRK3-213ENST00000597215 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.42■□□□□ 0.381e-9■■■□□ 14.6
VRK3-213ENST00000597215 DAGLAQ9Y4D2 1042 aa17.42■□□□□ 0.38
VRK3-213ENST00000597215 PCDHAC2Q9Y5I4 1007 aa17.42■□□□□ 0.38
VRK3-213ENST00000597215 MROH7-TTC4A0A0A0MT08 1334 aa17.42■□□□□ 0.38
VRK3-213ENST00000597215 GAKO14976 1311 aa17.42■□□□□ 0.38
VRK3-213ENST00000597215 CHADLQ6NUI6 762 aa17.41■□□□□ 0.38
VRK3-213ENST00000597215 ZNF384Q8TF68 577 aa17.41■□□□□ 0.38
VRK3-213ENST00000597215 PRMT6Q96LA8 375 aaPredicted RBP17.41■□□□□ 0.38
VRK3-213ENST00000597215 GGA3Q9NZ52 723 aa17.41■□□□□ 0.38
VRK3-213ENST00000597215 PGAP2Q9UHJ9 254 aa17.41■□□□□ 0.38
VRK3-213ENST00000597215 PITPNM2Q9BZ72 1349 aa17.41■□□□□ 0.38
VRK3-213ENST00000597215 MAP4K4O95819 1239 aaPredicted RBP17.4■□□□□ 0.38
VRK3-213ENST00000597215 APOBEC3HQ6NTF7 200 aaKnown RBP17.4■□□□□ 0.38
VRK3-213ENST00000597215 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
VRK3-213ENST00000597215 KBTBD3Q8NAB2 608 aa17.4■□□□□ 0.38
VRK3-213ENST00000597215 SMC1BQ8NDV3 1235 aa17.4■□□□□ 0.38
VRK3-213ENST00000597215 DCPSQ96C86 337 aaKnown RBP17.4■□□□□ 0.38
VRK3-213ENST00000597215 PDE6AP16499 860 aa17.39■□□□□ 0.37
VRK3-213ENST00000597215 CYP7A1P22680 504 aa17.39■□□□□ 0.37
VRK3-213ENST00000597215 LRRFIP1Q32MZ4 808 aaKnown RBP17.39■□□□□ 0.37
VRK3-213ENST00000597215 SLC9C2Q5TAH2 1124 aa17.39■□□□□ 0.37
VRK3-213ENST00000597215 ANGEL2Q5VTE6 544 aaKnown RBP17.39■□□□□ 0.37
VRK3-213ENST00000597215 ZSCAN25Q6NSZ9 544 aa17.39■□□□□ 0.37
VRK3-213ENST00000597215 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.37
VRK3-213ENST00000597215 TDRD3Q9H7E2 651 aaKnown RBP17.39■□□□□ 0.37
VRK3-213ENST00000597215 ASTN2O75129 1339 aaPredicted RBP17.39■□□□□ 0.37
VRK3-213ENST00000597215 POLR2AP24928 1970 aaKnown RBP17.39■□□□□ 0.37
VRK3-213ENST00000597215 GPR75-ASB3A0A0A6YYF3 556 aa17.38■□□□□ 0.37
VRK3-213ENST00000597215 CLRN2A0PK11 232 aa17.38■□□□□ 0.37
VRK3-213ENST00000597215 BTDP43251 543 aa17.38■□□□□ 0.37
VRK3-213ENST00000597215 SPDYE2Q495Y8 402 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms