RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 KIF3CO14782 793 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 IGSF3O75054 1194 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 GLRX3O76003 335 aaKnown RBP10.18□□□□□ -0.78
VRK3-211ENST00000596445 PDE1AP54750 535 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 HDLBPQ00341 1268 aaKnown RBP10.18□□□□□ -0.78
VRK3-211ENST00000596445 TTF1Q15361 905 aaPredicted RBP10.18□□□□□ -0.78
VRK3-211ENST00000596445 KIF4BQ2VIQ3 1234 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 TBC1D10BQ4KMP7 808 aaPredicted RBP10.18□□□□□ -0.78
VRK3-211ENST00000596445 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 ERICH6Q7L0X2 663 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 MTMR14Q8NCE2 650 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 TRPM4Q8TD43 1214 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 DNAJC2Q99543 621 aaKnown RBP10.18□□□□□ -0.78
VRK3-211ENST00000596445 HAUS7Q99871 368 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 BOLA2Q9H3K6 86 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 LRP2BPQ9P2M1 347 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 SERPINA10Q9UK55 444 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 NDUFB9Q9Y6M9 179 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 ECM29Q5VYK3 1845 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 ADAMTSL1Q8N6G6 1762 aa10.18□□□□□ -0.78
VRK3-211ENST00000596445 MYH7P12883 1935 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 MAST2Q6P0Q8 1798 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 GOLIM4O00461 696 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 EGFRP00533 1210 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 CRKP46108 304 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 HIRAP54198 1017 aaPredicted RBP10.17□□□□□ -0.78
VRK3-211ENST00000596445 DLGAP5Q15398 846 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 CFAP100Q494V2 611 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 EAPPQ56P03 285 aaPredicted RBP10.17□□□□□ -0.78
VRK3-211ENST00000596445 RBM26Q5T8P6 1007 aaKnown RBP10.17□□□□□ -0.78
VRK3-211ENST00000596445 TSHZ3Q63HK5 1081 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 HHIPL2Q6UWX4 724 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 DZIP1Q86YF9 867 aaKnown RBP10.17□□□□□ -0.78
VRK3-211ENST00000596445 PLEKHM2Q8IWE5 1019 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 PI4K2BQ8TCG2 481 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 ZC3H15Q8WU90 426 aaKnown RBP10.17□□□□□ -0.78
VRK3-211ENST00000596445 TEKT1Q969V4 418 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 ZBED3Q96IU2 234 aaPredicted RBP10.17□□□□□ -0.78
VRK3-211ENST00000596445 PIH1D3Q9NQM4 214 aaKnown RBP10.17□□□□□ -0.78
VRK3-211ENST00000596445 PAG1Q9NWQ8 432 aa10.17□□□□□ -0.78
VRK3-211ENST00000596445 AOX1Q06278 1338 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 WNT10BO00744 389 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 RBM5P52756 815 aaKnown RBP eCLIP10.16□□□□□ -0.78
VRK3-211ENST00000596445 GSTO1P78417 241 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 MECOMQ03112 1051 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 TMED8Q6PL24 325 aaPredicted RBP10.16□□□□□ -0.78
VRK3-211ENST00000596445 LDHDQ86WU2 507 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 NSUN4Q96CB9 384 aaKnown RBP10.16□□□□□ -0.78
VRK3-211ENST00000596445 ZDHHC15Q96MV8 337 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 OSBPL3Q9H4L5 887 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 ANTXR1Q9H6X2 564 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 RAI14Q9P0K7 980 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 PGAP2Q9UHJ9 254 aa10.16□□□□□ -0.78
VRK3-211ENST00000596445 IDH1O75874 414 aaKnown RBP10.15□□□□□ -0.78
VRK3-211ENST00000596445 TOMM70O94826 608 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 LDHCP07864 332 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 PDE4AP27815 886 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 MAP3K12Q12852 859 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 DIXDC1Q155Q3 683 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 NBPF9Q3BBW0 867 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 ZNF384Q8TF68 577 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 EDC3Q96F86 508 aaKnown RBP10.15□□□□□ -0.78
VRK3-211ENST00000596445 FAM163AQ96GL9 167 aaPredicted RBP10.15□□□□□ -0.78
VRK3-211ENST00000596445 PRMT6Q96LA8 375 aaPredicted RBP10.15□□□□□ -0.78
VRK3-211ENST00000596445 CLEC11AQ9Y240 323 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 PCDHAC2Q9Y5I4 1007 aa10.15□□□□□ -0.78
VRK3-211ENST00000596445 MROH7-TTC4A0A0A0MT08 1334 aa10.14□□□□□ -0.79
VRK3-211ENST00000596445 GAKO14976 1311 aa10.14□□□□□ -0.79
VRK3-211ENST00000596445 AK9Q5TCS8 1911 aa10.14□□□□□ -0.79
VRK3-211ENST00000596445 MYO1BO43795 1136 aa10.14□□□□□ -0.79
VRK3-211ENST00000596445 NAA16Q6N069 864 aaPredicted RBP10.14□□□□□ -0.79
VRK3-211ENST00000596445 APOBEC3HQ6NTF7 200 aaKnown RBP10.14□□□□□ -0.79
VRK3-211ENST00000596445 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
VRK3-211ENST00000596445 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.14□□□□□ -0.791e-9■■■□□ 14.6
VRK3-211ENST00000596445 DAGLAQ9Y4D2 1042 aa10.14□□□□□ -0.79
VRK3-211ENST00000596445 PITPNM2Q9BZ72 1349 aa10.13□□□□□ -0.79
VRK3-211ENST00000596445 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
VRK3-211ENST00000596445 PDE6AP16499 860 aa10.13□□□□□ -0.79
VRK3-211ENST00000596445 SPDYE2Q495Y8 402 aa10.13□□□□□ -0.79
VRK3-211ENST00000596445 SLC9C2Q5TAH2 1124 aa10.13□□□□□ -0.79
VRK3-211ENST00000596445 ANGEL2Q5VTE6 544 aaKnown RBP10.13□□□□□ -0.79
VRK3-211ENST00000596445 CHADLQ6NUI6 762 aa10.13□□□□□ -0.79
VRK3-211ENST00000596445 MAGEB6Q8N7X4 407 aa10.13□□□□□ -0.79
VRK3-211ENST00000596445 KBTBD3Q8NAB2 608 aa10.13□□□□□ -0.79
VRK3-211ENST00000596445 SMC1BQ8NDV3 1235 aa10.13□□□□□ -0.79
VRK3-211ENST00000596445 DCPSQ96C86 337 aaKnown RBP10.13□□□□□ -0.79
VRK3-211ENST00000596445 GGA3Q9NZ52 723 aa10.13□□□□□ -0.79
VRK3-211ENST00000596445 ASTN2O75129 1339 aaPredicted RBP10.12□□□□□ -0.79
VRK3-211ENST00000596445 GPR75-ASB3A0A0A6YYF3 556 aa10.12□□□□□ -0.79
VRK3-211ENST00000596445 CYP7A1P22680 504 aa10.12□□□□□ -0.79
VRK3-211ENST00000596445 FSTL1Q12841 308 aa10.12□□□□□ -0.79
VRK3-211ENST00000596445 LRRFIP1Q32MZ4 808 aaKnown RBP10.12□□□□□ -0.79
VRK3-211ENST00000596445 ZSCAN25Q6NSZ9 544 aa10.12□□□□□ -0.79
VRK3-211ENST00000596445 APOBEC3FQ8IUX4 373 aaKnown RBP10.12□□□□□ -0.79
VRK3-211ENST00000596445 CNTROBQ8N137 903 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms