RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SERPINA10Q9UK55 444 aa23.57■■□□□ 1.36
PNKP-207ENST00000596014 CLEC11AQ9Y240 323 aa23.57■■□□□ 1.36
PNKP-207ENST00000596014 NDUFB9Q9Y6M9 179 aa23.57■■□□□ 1.36
PNKP-207ENST00000596014 MYO5AQ9Y4I1 1855 aaKnown RBP23.56■■□□□ 1.36
PNKP-207ENST00000596014 HDLBPQ00341 1268 aaKnown RBP23.56■■□□□ 1.36
PNKP-207ENST00000596014 GPATCH3Q96I76 525 aa23.56■■□□□ 1.36
PNKP-207ENST00000596014 MRIQ9BWK5 157 aa23.56■■□□□ 1.36
PNKP-207ENST00000596014 MAST3O60307 1309 aa23.56■■□□□ 1.36
PNKP-207ENST00000596014 POLR2AP24928 1970 aaKnown RBP23.55■■□□□ 1.36
PNKP-207ENST00000596014 DLGAP5Q15398 846 aa23.55■■□□□ 1.36
PNKP-207ENST00000596014 CFAP100Q494V2 611 aa23.55■■□□□ 1.36
PNKP-207ENST00000596014 ERICH6Q7L0X2 663 aa23.55■■□□□ 1.36
PNKP-207ENST00000596014 MTMR14Q8NCE2 650 aa23.55■■□□□ 1.36
PNKP-207ENST00000596014 BOLA2Q9H3K6 86 aa23.55■■□□□ 1.36
PNKP-207ENST00000596014 WNT10BO00744 389 aa23.54■■□□□ 1.36
PNKP-207ENST00000596014 NBPF9Q3BBW0 867 aa23.54■■□□□ 1.36
PNKP-207ENST00000596014 RBM46Q8TBY0 533 aaKnown RBP23.54■■□□□ 1.36
PNKP-207ENST00000596014 ZC3H15Q8WU90 426 aaKnown RBP23.54■■□□□ 1.36
PNKP-207ENST00000596014 ZBED3Q96IU2 234 aaPredicted RBP23.54■■□□□ 1.36
PNKP-207ENST00000596014 PGAP2Q9UHJ9 254 aa23.54■■□□□ 1.36
PNKP-207ENST00000596014 PCDHAC2Q9Y5I4 1007 aa23.54■■□□□ 1.36
PNKP-207ENST00000596014 SALL3Q9BXA9 1300 aa23.54■■□□□ 1.36
PNKP-207ENST00000596014 CRKP46108 304 aa23.54■■□□□ 1.36
PNKP-207ENST00000596014 RBM5P52756 815 aaKnown RBP eCLIP23.54■■□□□ 1.36
PNKP-207ENST00000596014 TSHZ3Q63HK5 1081 aa23.54■■□□□ 1.36
PNKP-207ENST00000596014 LRP2BPQ9P2M1 347 aa23.54■■□□□ 1.36
PNKP-207ENST00000596014 TTC41PQ6P2S7 1318 aa23.53■■□□□ 1.36
PNKP-207ENST00000596014 MYH2Q9UKX2 1941 aa23.53■■□□□ 1.36
PNKP-207ENST00000596014 MX1P20591 662 aa23.53■■□□□ 1.36
PNKP-207ENST00000596014 CHADLQ6NUI6 762 aa23.53■■□□□ 1.36
PNKP-207ENST00000596014 TEKT1Q969V4 418 aa23.53■■□□□ 1.36
PNKP-207ENST00000596014 PRMT6Q96LA8 375 aaPredicted RBP23.53■■□□□ 1.36
PNKP-207ENST00000596014 HAUS7Q99871 368 aa23.53■■□□□ 1.36
PNKP-207ENST00000596014 ANTXR1Q9H6X2 564 aa23.53■■□□□ 1.36
PNKP-207ENST00000596014 PIH1D3Q9NQM4 214 aaKnown RBP23.53■■□□□ 1.36
PNKP-207ENST00000596014 SPDYE2BA6NHP3 402 aa23.52■■□□□ 1.36
PNKP-207ENST00000596014 SPDYE6P0CI01 402 aa23.52■■□□□ 1.36
PNKP-207ENST00000596014 DIXDC1Q155Q3 683 aa23.52■■□□□ 1.36
PNKP-207ENST00000596014 HHIPL2Q6UWX4 724 aa23.52■■□□□ 1.36
PNKP-207ENST00000596014 DZIP1Q86YF9 867 aaKnown RBP23.52■■□□□ 1.36
PNKP-207ENST00000596014 DNAJC2Q99543 621 aaKnown RBP23.52■■□□□ 1.36
PNKP-207ENST00000596014 PPP4R2Q9NY27 417 aa23.52■■□□□ 1.36
PNKP-207ENST00000596014 RAI14Q9P0K7 980 aa23.52■■□□□ 1.36
PNKP-207ENST00000596014 ASTN2O75129 1339 aaPredicted RBP23.52■■□□□ 1.36
PNKP-207ENST00000596014 MECOMQ03112 1051 aa23.51■■□□□ 1.35
PNKP-207ENST00000596014 SMC1BQ8NDV3 1235 aa23.51■■□□□ 1.35
PNKP-207ENST00000596014 MAP1SQ66K74 1059 aaPredicted RBP23.51■■□□□ 1.35
PNKP-207ENST00000596014 ZNF384Q8TF68 577 aa23.51■■□□□ 1.35
PNKP-207ENST00000596014 NSUN4Q96CB9 384 aaKnown RBP23.51■■□□□ 1.35
PNKP-207ENST00000596014 CCDC136Q96JN2 1154 aa23.51■■□□□ 1.35
PNKP-207ENST00000596014 ZDHHC15Q96MV8 337 aa23.51■■□□□ 1.35
PNKP-207ENST00000596014 STAP2Q9UGK3 403 aa23.51■■□□□ 1.35
PNKP-207ENST00000596014 GOLIM4O00461 696 aa23.5■■□□□ 1.35
PNKP-207ENST00000596014 PDE1AP54750 535 aa23.5■■□□□ 1.35
PNKP-207ENST00000596014 PI4K2BQ8TCG2 481 aa23.5■■□□□ 1.35
PNKP-207ENST00000596014 EDC3Q96F86 508 aaKnown RBP23.5■■□□□ 1.35
PNKP-207ENST00000596014 PAG1Q9NWQ8 432 aa23.5■■□□□ 1.35
PNKP-207ENST00000596014 ECM29Q5VYK3 1845 aa23.49■■□□□ 1.35
PNKP-207ENST00000596014 DOCK2Q92608 1830 aa23.49■■□□□ 1.35
PNKP-207ENST00000596014 ERC2O15083 957 aa23.49■■□□□ 1.35
PNKP-207ENST00000596014 TTF1Q15361 905 aaPredicted RBP23.49■■□□□ 1.35
PNKP-207ENST00000596014 GGA3Q9NZ52 723 aa23.49■■□□□ 1.35
PNKP-207ENST00000596014 AOX1Q06278 1338 aa23.48■■□□□ 1.35
PNKP-207ENST00000596014 IDH1O75874 414 aaKnown RBP23.48■■□□□ 1.35
PNKP-207ENST00000596014 GLRX3O76003 335 aaKnown RBP23.48■■□□□ 1.35
PNKP-207ENST00000596014 FSTL1Q12841 308 aa23.48■■□□□ 1.35
PNKP-207ENST00000596014 ANGEL2Q5VTE6 544 aaKnown RBP23.48■■□□□ 1.35
PNKP-207ENST00000596014 APOBEC3HQ6NTF7 200 aaKnown RBP23.48■■□□□ 1.35
PNKP-207ENST00000596014 CENPQQ7L2Z9 268 aaPredicted RBP23.48■■□□□ 1.35
PNKP-207ENST00000596014 SLF2Q8IX21 1173 aa23.48■■□□□ 1.35
PNKP-207ENST00000596014 CNTROBQ8N137 903 aa23.48■■□□□ 1.35
PNKP-207ENST00000596014 DAGLAQ9Y4D2 1042 aa23.48■■□□□ 1.35
PNKP-207ENST00000596014 MYO1BO43795 1136 aa23.48■■□□□ 1.35
PNKP-207ENST00000596014 IGSF3O75054 1194 aa23.48■■□□□ 1.35
PNKP-207ENST00000596014 DCPSQ96C86 337 aaKnown RBP23.48■■□□□ 1.35
PNKP-207ENST00000596014 FAM163AQ96GL9 167 aaPredicted RBP23.48■■□□□ 1.35
PNKP-207ENST00000596014 GSTO1P78417 241 aa23.47■■□□□ 1.35
PNKP-207ENST00000596014 TDRD3Q9H7E2 651 aaKnown RBP23.47■■□□□ 1.35
PNKP-207ENST00000596014 GAKO14976 1311 aa23.46■■□□□ 1.35
PNKP-207ENST00000596014 MAP3K12Q12852 859 aa23.46■■□□□ 1.35
PNKP-207ENST00000596014 PLEKHM2Q8IWE5 1019 aa23.46■■□□□ 1.35
PNKP-207ENST00000596014 PITPNM2Q9BZ72 1349 aa23.45■■□□□ 1.35
PNKP-207ENST00000596014 ITGBL1O95965 494 aaPredicted RBP23.45■■□□□ 1.34
PNKP-207ENST00000596014 LDHCP07864 332 aa23.45■■□□□ 1.34
PNKP-207ENST00000596014 NAA16Q6N069 864 aaPredicted RBP23.45■■□□□ 1.34
PNKP-207ENST00000596014 CDC37L1Q7L3B6 337 aa23.45■■□□□ 1.34
PNKP-207ENST00000596014 MAST2Q6P0Q8 1798 aa23.45■■□□□ 1.34
PNKP-207ENST00000596014 MROH7-TTC4A0A0A0MT08 1334 aa23.45■■□□□ 1.34
PNKP-207ENST00000596014 CLRN2A0PK11 232 aa23.44■■□□□ 1.34
PNKP-207ENST00000596014 PDE4AP27815 886 aa23.44■■□□□ 1.34
PNKP-207ENST00000596014 SPDYE2Q495Y8 402 aa23.44■■□□□ 1.34
PNKP-207ENST00000596014 GLIS2Q9BZE0 524 aaPredicted RBP23.44■■□□□ 1.34
PNKP-207ENST00000596014 KRT26Q7Z3Y9 468 aa23.44■■□□□ 1.34
PNKP-207ENST00000596014 USP48Q86UV5 1035 aa23.44■■□□□ 1.34
PNKP-207ENST00000596014 OSBPL3Q9H4L5 887 aa23.44■■□□□ 1.34
PNKP-207ENST00000596014 ZNF70Q9UC06 446 aaPredicted RBP23.44■■□□□ 1.34
PNKP-207ENST00000596014 SCAF8Q9UPN6 1271 aaKnown RBP23.44■■□□□ 1.34
PNKP-207ENST00000596014 GPR75-ASB3A0A0A6YYF3 556 aa23.43■■□□□ 1.34
PNKP-207ENST00000596014 SULF1Q8IWU6 871 aa23.43■■□□□ 1.34
PNKP-207ENST00000596014 MAGEB6Q8N7X4 407 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms