RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 WDR33Q9C0J8 1336 aaKnown RBP19.39■□□□□ 0.69
LIG3-215ENST00000592690 ZBTB22O15209 634 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 MYO1BO43795 1136 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 PRDX5P30044 214 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 HUNKP57058 714 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 GRM1Q13255 1194 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 TNNI3KQ59H18 835 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 SIRT2Q8IXJ6 389 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 C2orf69Q8N8R5 385 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 CAPNS2Q96L46 248 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 VEZTQ9HBM0 779 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 EXOC6BQ9Y2D4 811 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 SUGT1Q9Y2Z0 365 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 FPGT-TNNI3KV9GXZ4 949 aa19.38■□□□□ 0.69
LIG3-215ENST00000592690 MAST3O60307 1309 aa19.37■□□□□ 0.69
LIG3-215ENST00000592690 SALL1Q9NSC2 1324 aa19.37■□□□□ 0.69
LIG3-215ENST00000592690 HDLBPQ00341 1268 aaKnown RBP19.37■□□□□ 0.69
LIG3-215ENST00000592690 SPDYE2Q495Y8 402 aa19.37■□□□□ 0.69
LIG3-215ENST00000592690 TEKT1Q969V4 418 aa19.37■□□□□ 0.69
LIG3-215ENST00000592690 TDRD3Q9H7E2 651 aaKnown RBP19.37■□□□□ 0.69
LIG3-215ENST00000592690 GPR108Q9NPR9 543 aa19.37■□□□□ 0.69
LIG3-215ENST00000592690 PDS5AQ29RF7 1337 aaKnown RBP19.36■□□□□ 0.69
LIG3-215ENST00000592690 RRP1P56182 461 aaKnown RBP19.36■□□□□ 0.69
LIG3-215ENST00000592690 GORABQ5T7V8 394 aa19.36■□□□□ 0.69
LIG3-215ENST00000592690 PI16Q6UXB8 463 aa19.36■□□□□ 0.69
LIG3-215ENST00000592690 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
LIG3-215ENST00000592690 HHIPL1Q96JK4 782 aa19.36■□□□□ 0.69
LIG3-215ENST00000592690 DEFB129Q9H1M3 183 aa19.36■□□□□ 0.69
LIG3-215ENST00000592690 CHMP4BQ9H444 224 aaKnown RBP19.36■□□□□ 0.69
LIG3-215ENST00000592690 ZNF70Q9UC06 446 aaPredicted RBP19.36■□□□□ 0.69
LIG3-215ENST00000592690 MAST2Q6P0Q8 1798 aa19.36■□□□□ 0.69
LIG3-215ENST00000592690 SSC5DA1L4H1 1573 aa19.36■□□□□ 0.69
LIG3-215ENST00000592690 OTOFQ9HC10 1997 aa19.35■□□□□ 0.69
LIG3-215ENST00000592690 ARID4AP29374 1257 aaPredicted RBP19.35■□□□□ 0.69
LIG3-215ENST00000592690 ECE1P42892 770 aa19.35■□□□□ 0.69
LIG3-215ENST00000592690 DIXDC1Q155Q3 683 aa19.35■□□□□ 0.69
LIG3-215ENST00000592690 MOB2Q70IA6 237 aa19.35■□□□□ 0.69
LIG3-215ENST00000592690 DBNDD2Q9BQY9 259 aa19.35■□□□□ 0.69
LIG3-215ENST00000592690 AK9Q5TCS8 1911 aa19.34■□□□□ 0.69
LIG3-215ENST00000592690 AOC2O75106 756 aa19.34■□□□□ 0.69
LIG3-215ENST00000592690 LDHBP07195 334 aaKnown RBP19.34■□□□□ 0.69
LIG3-215ENST00000592690 HSPA1AP0DMV8 641 aaKnown RBP19.34■□□□□ 0.69
LIG3-215ENST00000592690 HSPA1BP0DMV9 641 aaKnown RBP19.34■□□□□ 0.69
LIG3-215ENST00000592690 HHIPL2Q6UWX4 724 aa19.34■□□□□ 0.69
LIG3-215ENST00000592690 ZDHHC15Q96MV8 337 aa19.34■□□□□ 0.69
LIG3-215ENST00000592690 TLR7Q9NYK1 1049 aaKnown RBP19.34■□□□□ 0.69
LIG3-215ENST00000592690 HMG20BQ9P0W2 317 aa19.34■□□□□ 0.69
LIG3-215ENST00000592690 HMMRO75330 724 aa19.33■□□□□ 0.68
LIG3-215ENST00000592690 MCAMP43121 646 aa19.33■□□□□ 0.68
LIG3-215ENST00000592690 APOBEC3HQ6NTF7 200 aaKnown RBP19.33■□□□□ 0.68
LIG3-215ENST00000592690 EAF2Q96CJ1 260 aaPredicted RBP19.33■□□□□ 0.68
LIG3-215ENST00000592690 MRIQ9BWK5 157 aa19.33■□□□□ 0.68
LIG3-215ENST00000592690 DBNLQ9UJU6 430 aaKnown RBP19.33■□□□□ 0.68
LIG3-215ENST00000592690 TCP10L2B9ZVM9 353 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 NF2P35240 595 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 CACNB3P54284 484 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 FKBP1BP68106 108 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 RASA3Q14644 834 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 RGMBQ6NW40 437 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 SPATA5Q8NB90 893 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 CCDC8Q9H0W5 538 aaPredicted RBP19.32■□□□□ 0.68
LIG3-215ENST00000592690 ABCF2Q9UG63 623 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 FZD1Q9UP38 647 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 DAGLAQ9Y4D2 1042 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 PPP2R3BQ9Y5P8 575 aa19.32■□□□□ 0.68
LIG3-215ENST00000592690 DOCK2Q92608 1830 aa19.31■□□□□ 0.68
LIG3-215ENST00000592690 UQCRFS1P1P0C7P4 283 aa19.31■□□□□ 0.68
LIG3-215ENST00000592690 PRKG1Q13976 671 aa19.31■□□□□ 0.68
LIG3-215ENST00000592690 TTLL12Q14166 644 aaPredicted RBP19.31■□□□□ 0.68
LIG3-215ENST00000592690 TTC39AQ5SRH9 613 aa19.31■□□□□ 0.68
LIG3-215ENST00000592690 ERC1Q8IUD2 1116 aa19.31■□□□□ 0.68
LIG3-215ENST00000592690 ZGPATQ8N5A5 531 aaKnown RBP19.31■□□□□ 0.68
LIG3-215ENST00000592690 FAM155AB1AL88 458 aaPredicted RBP19.3■□□□□ 0.68
LIG3-215ENST00000592690 UBE2Q2LH0YL09 131 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 APBB1O00213 710 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 TNFAIP1Q13829 316 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 NBPF12Q5TAG4 269 aaPredicted RBP19.3■□□□□ 0.68
LIG3-215ENST00000592690 IFFO2Q5TF58 517 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 TBC1D9Q6ZT07 1266 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 CDAN1Q8IWY9 1227 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 RHPN1Q8TCX5 695 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 ZIC5Q96T25 663 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 IL1RAPL2Q9NP60 686 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 CDK5RAP2Q96SN8 1893 aa19.3■□□□□ 0.68
LIG3-215ENST00000592690 ZNF157P51786 506 aaPredicted RBP19.29■□□□□ 0.68
LIG3-215ENST00000592690 CCDC158Q5M9N0 1113 aa19.29■□□□□ 0.68
LIG3-215ENST00000592690 AACSQ86V21 672 aa19.29■□□□□ 0.68
LIG3-215ENST00000592690 DZIP1Q86YF9 867 aaKnown RBP19.29■□□□□ 0.68
LIG3-215ENST00000592690 SNRKQ9NRH2 765 aa19.29■□□□□ 0.68
LIG3-215ENST00000592690 SPTY2D1Q68D10 685 aaPredicted RBP19.28■□□□□ 0.68
LIG3-215ENST00000592690 ERICH6Q7L0X2 663 aa19.28■□□□□ 0.68
LIG3-215ENST00000592690 TEPSINQ96N21 525 aa19.28■□□□□ 0.68
LIG3-215ENST00000592690 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
LIG3-215ENST00000592690 WBP1LQ9NX94 342 aa19.28■□□□□ 0.68
LIG3-215ENST00000592690 TMOD2Q9NZR1 351 aa19.28■□□□□ 0.68
LIG3-215ENST00000592690 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
LIG3-215ENST00000592690 LAMB1P07942 1786 aa19.28■□□□□ 0.68
LIG3-215ENST00000592690 GAKO14976 1311 aa19.27■□□□□ 0.68
LIG3-215ENST00000592690 SLC10A3P09131 477 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms