RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 TDRD7Q8NHU6 1098 aaKnown RBP12.72□□□□□ -0.37
VMP1-214ENST00000592106 TBC1D22AQ8WUA7 517 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 SLC10A4Q96EP9 437 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 SERPINA10Q9UK55 444 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 TTF2Q9UNY4 1162 aaKnown RBP12.72□□□□□ -0.37
VMP1-214ENST00000592106 JAG2Q9Y219 1238 aa12.72□□□□□ -0.37
VMP1-214ENST00000592106 ZBTB48P10074 688 aaPredicted RBP12.71□□□□□ -0.37
VMP1-214ENST00000592106 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
VMP1-214ENST00000592106 GYG1P46976 350 aa12.71□□□□□ -0.37
VMP1-214ENST00000592106 TNNI2P48788 182 aa12.71□□□□□ -0.37
VMP1-214ENST00000592106 INHBEP58166 350 aa12.71□□□□□ -0.37
VMP1-214ENST00000592106 NOM1Q5C9Z4 860 aaKnown RBP12.71□□□□□ -0.37
VMP1-214ENST00000592106 LDLRAD1Q5T700 205 aa12.71□□□□□ -0.37
VMP1-214ENST00000592106 SPRYD7Q5W111 196 aa12.71□□□□□ -0.37
VMP1-214ENST00000592106 MAST3O60307 1309 aa12.7□□□□□ -0.38
VMP1-214ENST00000592106 TBC1D8O95759 1140 aa12.7□□□□□ -0.38
VMP1-214ENST00000592106 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
VMP1-214ENST00000592106 CT47B1P0C2W7 299 aaPredicted RBP12.7□□□□□ -0.38
VMP1-214ENST00000592106 GSE1Q14687 1217 aa12.7□□□□□ -0.38
VMP1-214ENST00000592106 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
VMP1-214ENST00000592106 KAZALD1Q96I82 304 aa12.7□□□□□ -0.38
VMP1-214ENST00000592106 FAM84BQ96KN1 310 aaPredicted RBP12.7□□□□□ -0.38
VMP1-214ENST00000592106 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
VMP1-214ENST00000592106 PUS3Q9BZE2 481 aaKnown RBP12.7□□□□□ -0.38
VMP1-214ENST00000592106 SMC4Q9NTJ3 1288 aa12.7□□□□□ -0.38
VMP1-214ENST00000592106 TMOD2Q9NZR1 351 aa12.7□□□□□ -0.38
VMP1-214ENST00000592106 HDAC5Q9UQL6 1122 aa12.7□□□□□ -0.38
VMP1-214ENST00000592106 RIPOR2Q9Y4F9 1068 aa12.7□□□□□ -0.38
VMP1-214ENST00000592106 SSC5DA1L4H1 1573 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 KIF16BQ96L93 1317 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 GPR25O00155 361 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 PDE8BO95263 885 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 SLFN5Q08AF3 891 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 CHAF1AQ13111 956 aaPredicted RBP12.69□□□□□ -0.38
VMP1-214ENST00000592106 RASA3Q14644 834 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
VMP1-214ENST00000592106 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 ANKRD13AQ8IZ07 590 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 ZNF296Q8WUU4 475 aaPredicted RBP12.69□□□□□ -0.38
VMP1-214ENST00000592106 CFHR5Q9BXR6 569 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
VMP1-214ENST00000592106 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
VMP1-214ENST00000592106 FKTNO75072 461 aa12.68□□□□□ -0.38
VMP1-214ENST00000592106 SLC5A1P13866 664 aa12.68□□□□□ -0.38
VMP1-214ENST00000592106 CRKP46108 304 aa12.68□□□□□ -0.38
VMP1-214ENST00000592106 HDLBPQ00341 1268 aaKnown RBP12.68□□□□□ -0.38
VMP1-214ENST00000592106 LRRC24Q50LG9 513 aa12.68□□□□□ -0.38
VMP1-214ENST00000592106 FBXO33Q7Z6M2 555 aa12.68□□□□□ -0.38
VMP1-214ENST00000592106 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
VMP1-214ENST00000592106 WNK4Q96J92 1243 aa12.68□□□□□ -0.38
VMP1-214ENST00000592106 ZNF70Q9UC06 446 aaPredicted RBP12.68□□□□□ -0.38
VMP1-214ENST00000592106 SUGT1Q9Y2Z0 365 aa12.68□□□□□ -0.38
VMP1-214ENST00000592106 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
VMP1-214ENST00000592106 NBPF12Q5TAG4 269 aaPredicted RBP12.67□□□□□ -0.38
VMP1-214ENST00000592106 RASEFQ8IZ41 740 aa12.67□□□□□ -0.38
VMP1-214ENST00000592106 TEKT1Q969V4 418 aa12.67□□□□□ -0.38
VMP1-214ENST00000592106 HOOK2Q96ED9 719 aa12.67□□□□□ -0.38
VMP1-214ENST00000592106 API5Q9BZZ5 524 aaKnown RBP12.67□□□□□ -0.38
VMP1-214ENST00000592106 TDRD3Q9H7E2 651 aaKnown RBP12.67□□□□□ -0.38
VMP1-214ENST00000592106 IQSEC3Q9UPP2 1182 aaPredicted RBP12.67□□□□□ -0.38
VMP1-214ENST00000592106 LAMB1P07942 1786 aa12.66□□□□□ -0.38
VMP1-214ENST00000592106 TCP10L2B9ZVM9 353 aa12.66□□□□□ -0.38
VMP1-214ENST00000592106 FBXO46Q6PJ61 603 aaPredicted RBP12.66□□□□□ -0.38
VMP1-214ENST00000592106 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
VMP1-214ENST00000592106 VGLL2Q8N8G2 317 aa12.66□□□□□ -0.38
VMP1-214ENST00000592106 CLMNQ96JQ2 1002 aa12.66□□□□□ -0.38
VMP1-214ENST00000592106 USP44Q9H0E7 712 aa12.66□□□□□ -0.38
VMP1-214ENST00000592106 FZD1Q9UP38 647 aa12.66□□□□□ -0.38
VMP1-214ENST00000592106 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
VMP1-214ENST00000592106 CSADQ9Y600 493 aa12.66□□□□□ -0.38
VMP1-214ENST00000592106 EYA2O00167 538 aa12.65□□□□□ -0.38
VMP1-214ENST00000592106 USP2O75604 605 aaPredicted RBP12.65□□□□□ -0.38
VMP1-214ENST00000592106 SOX10P56693 466 aa12.65□□□□□ -0.38
VMP1-214ENST00000592106 WDR66Q8TBY9 1149 aa12.65□□□□□ -0.38
VMP1-214ENST00000592106 LPIN2Q92539 896 aa12.65□□□□□ -0.38
VMP1-214ENST00000592106 MYH13Q9UKX3 1938 aa12.64□□□□□ -0.39
VMP1-214ENST00000592106 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
VMP1-214ENST00000592106 WDHD1O75717 1129 aaPredicted RBP12.64□□□□□ -0.39
VMP1-214ENST00000592106 BCAMP50895 628 aa12.64□□□□□ -0.39
VMP1-214ENST00000592106 KLHDC4Q8TBB5 520 aa12.64□□□□□ -0.39
VMP1-214ENST00000592106 ERO1AQ96HE7 468 aa12.64□□□□□ -0.39
VMP1-214ENST00000592106 ZDHHC15Q96MV8 337 aa12.64□□□□□ -0.39
VMP1-214ENST00000592106 MRIQ9BWK5 157 aa12.64□□□□□ -0.39
VMP1-214ENST00000592106 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
VMP1-214ENST00000592106 ELP3Q9H9T3 547 aa12.64□□□□□ -0.39
VMP1-214ENST00000592106 GNL3LQ9NVN8 582 aaKnown RBP12.64□□□□□ -0.39
VMP1-214ENST00000592106 AOX1Q06278 1338 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 CIAO1O76071 339 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 FGFR2P21802 821 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 MAP3K9P80192 1104 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 FKBP1CQ5VVH2 108 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 DCAF15Q66K64 600 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 OPTNQ96CV9 577 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 CEP126Q9P2H0 1117 aa12.63□□□□□ -0.39
VMP1-214ENST00000592106 RPAP1Q9BWH6 1393 aaPredicted RBP12.63□□□□□ -0.39
VMP1-214ENST00000592106 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms