RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ECE1P42892 770 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 CRKP46108 304 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 RRP1P56182 461 aaKnown RBP12.38□□□□□ -0.43
BRCA1-227ENST00000591849 TNNI3KQ59H18 835 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 TTC39AQ5SRH9 613 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 SPTY2D1Q68D10 685 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-227ENST00000591849 MTMR14Q8NCE2 650 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 PRMT6Q96LA8 375 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-227ENST00000591849 GBA2Q9HCG7 927 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-227ENST00000591849 GPR108Q9NPR9 543 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 TMOD2Q9NZR1 351 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 ABCF2Q9UG63 623 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 FPGT-TNNI3KV9GXZ4 949 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 HUNKP57058 714 aa12.37□□□□□ -0.43
BRCA1-227ENST00000591849 HDLBPQ00341 1268 aaKnown RBP12.37□□□□□ -0.43
BRCA1-227ENST00000591849 PRAMEF18Q5VWM3 479 aa12.37□□□□□ -0.43
BRCA1-227ENST00000591849 TDRD3Q9H7E2 651 aaKnown RBP12.37□□□□□ -0.43
BRCA1-227ENST00000591849 RASSF10A6NK89 507 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 RAB11FIP3O75154 756 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 CAPN15O75808 1086 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 TNNI2P48788 182 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 VEGFBP49765 207 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 TNFAIP1Q13829 316 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 RASGRF1Q13972 1273 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 GRIK5Q16478 980 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 SAPCD2Q86UD0 394 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 DZIP1Q86YF9 867 aaKnown RBP12.36□□□□□ -0.43
BRCA1-227ENST00000591849 SLF2Q8IX21 1173 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
BRCA1-227ENST00000591849 MRIQ9BWK5 157 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 CCDC8Q9H0W5 538 aaPredicted RBP12.36□□□□□ -0.43
BRCA1-227ENST00000591849 DEFB129Q9H1M3 183 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 ZNF70Q9UC06 446 aaPredicted RBP12.36□□□□□ -0.43
BRCA1-227ENST00000591849 PCDHAC2Q9Y5I4 1007 aa12.36□□□□□ -0.43
BRCA1-227ENST00000591849 PRKG1Q13976 671 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 SUPT20HL1Q3ZLR7 823 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 CYP4F22Q6NT55 531 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 ARMC9Q7Z3E5 817 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 AACSQ86V21 672 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
BRCA1-227ENST00000591849 SPATA5Q8NB90 893 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 RHPN1Q8TCX5 695 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 KIF1BPQ96EK5 621 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 CAPNS2Q96L46 248 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 DBNDD2Q9BQY9 259 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 RAI14Q9P0K7 980 aa12.35□□□□□ -0.43
BRCA1-227ENST00000591849 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
BRCA1-227ENST00000591849 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
BRCA1-227ENST00000591849 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
BRCA1-227ENST00000591849 TCP10L2B9ZVM9 353 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 IFIT2P09913 472 aaKnown RBP12.34□□□□□ -0.43
BRCA1-227ENST00000591849 PRDX5P30044 214 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 CTCFP49711 727 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-227ENST00000591849 ZNF157P51786 506 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-227ENST00000591849 FKBP1BP68106 108 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 RASA3Q14644 834 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 SPDYE2Q495Y8 402 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 HHIPL2Q6UWX4 724 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 ZDHHC15Q96MV8 337 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 IL1RAPL2Q9NP60 686 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 HMG20BQ9P0W2 317 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 LRP2BPQ9P2M1 347 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 PPP2R3BQ9Y5P8 575 aa12.34□□□□□ -0.43
BRCA1-227ENST00000591849 UBE2Q2LH0YL09 131 aa12.33□□□□□ -0.44
BRCA1-227ENST00000591849 FOXN1O15353 648 aa12.33□□□□□ -0.44
BRCA1-227ENST00000591849 LDHCP07864 332 aa12.33□□□□□ -0.44
BRCA1-227ENST00000591849 ARID4AP29374 1257 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-227ENST00000591849 GSTO1P78417 241 aa12.33□□□□□ -0.44
BRCA1-227ENST00000591849 RGMBQ6NW40 437 aa12.33□□□□□ -0.44
BRCA1-227ENST00000591849 SIRT2Q8IXJ6 389 aa12.33□□□□□ -0.44
BRCA1-227ENST00000591849 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-227ENST00000591849 CRBNQ96SW2 442 aa12.33□□□□□ -0.44
BRCA1-227ENST00000591849 BEGAINQ9BUH8 593 aa12.33□□□□□ -0.44
BRCA1-227ENST00000591849 PDS5AQ29RF7 1337 aaKnown RBP12.33□□□□□ -0.44
BRCA1-227ENST00000591849 SALL1Q9NSC2 1324 aa12.33□□□□□ -0.44
BRCA1-227ENST00000591849 PPP1R12BO60237 982 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-227ENST00000591849 MAP2K1Q02750 393 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-227ENST00000591849 DIXDC1Q155Q3 683 aa12.32□□□□□ -0.44
BRCA1-227ENST00000591849 TBC1D9Q6ZT07 1266 aa12.32□□□□□ -0.44
BRCA1-227ENST00000591849 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
BRCA1-227ENST00000591849 HHIPL1Q96JK4 782 aa12.32□□□□□ -0.44
BRCA1-227ENST00000591849 NOL10Q9BSC4 688 aaKnown RBP12.32□□□□□ -0.44
BRCA1-227ENST00000591849 USP40Q9NVE5 1235 aa12.32□□□□□ -0.44
BRCA1-227ENST00000591849 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
BRCA1-227ENST00000591849 ANGEL1Q9UNK9 670 aaKnown RBP12.32□□□□□ -0.44
BRCA1-227ENST00000591849 DAGLAQ9Y4D2 1042 aa12.32□□□□□ -0.44
BRCA1-227ENST00000591849 A0A1B0GUL6 1792 aa12.31□□□□□ -0.44
BRCA1-227ENST00000591849 ZBTB22O15209 634 aa12.31□□□□□ -0.44
BRCA1-227ENST00000591849 MCAMP43121 646 aa12.31□□□□□ -0.44
BRCA1-227ENST00000591849 CACNB3P54284 484 aa12.31□□□□□ -0.44
BRCA1-227ENST00000591849 APOBEC3HQ6NTF7 200 aaKnown RBP12.31□□□□□ -0.44
BRCA1-227ENST00000591849 PI16Q6UXB8 463 aa12.31□□□□□ -0.44
BRCA1-227ENST00000591849 MOB2Q70IA6 237 aa12.31□□□□□ -0.44
BRCA1-227ENST00000591849 WBP1LQ9NX94 342 aa12.31□□□□□ -0.44
BRCA1-227ENST00000591849 DBNLQ9UJU6 430 aaKnown RBP12.31□□□□□ -0.44
BRCA1-227ENST00000591849 PSME4Q14997 1843 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms