RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 MAP3K12Q12852 859 aa8.46□□□□□ -1.06
DNMT1-222ENST00000590619 SNAPC2Q13487 334 aa8.46□□□□□ -1.06
DNMT1-222ENST00000590619 PIAS4Q8N2W9 510 aaPredicted RBP8.46□□□□□ -1.06
DNMT1-222ENST00000590619 CD209Q9NNX6 404 aa8.46□□□□□ -1.06
DNMT1-222ENST00000590619 TIMELESSQ9UNS1 1208 aa8.46□□□□□ -1.06
DNMT1-222ENST00000590619 LEMD3Q9Y2U8 911 aa8.46□□□□□ -1.06
DNMT1-222ENST00000590619 CSADQ9Y600 493 aa8.46□□□□□ -1.06
DNMT1-222ENST00000590619 LAMB1P07942 1786 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 PSME4Q14997 1843 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 TMEM265A0A087WTH1 108 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 PDHXO00330 501 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 FCGRTP55899 365 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 ERO1BQ86YB8 467 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 PXYLP1Q8TE99 480 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 ZKSCAN4Q969J2 545 aaPredicted RBP8.45□□□□□ -1.06
DNMT1-222ENST00000590619 PLEKHF1Q96S99 279 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 NBPF3Q9H094 633 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 CHPF2Q9P2E5 772 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 ZNF70Q9UC06 446 aaPredicted RBP8.45□□□□□ -1.06
DNMT1-222ENST00000590619 SNCAIPQ9Y6H5 919 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 ADGRA2Q96PE1 1338 aa8.45□□□□□ -1.06
DNMT1-222ENST00000590619 BCRP11274 1271 aa8.44□□□□□ -1.06
DNMT1-222ENST00000590619 HSP90B1P14625 803 aaKnown RBP8.44□□□□□ -1.06
DNMT1-222ENST00000590619 RBM5P52756 815 aaKnown RBP eCLIP8.44□□□□□ -1.06
DNMT1-222ENST00000590619 MDM2Q00987 491 aaPredicted RBP8.44□□□□□ -1.06
DNMT1-222ENST00000590619 NFE2L2Q16236 605 aa8.44□□□□□ -1.06
DNMT1-222ENST00000590619 KRT24Q2M2I5 525 aa8.44□□□□□ -1.06
DNMT1-222ENST00000590619 TJAP1Q5JTD0 557 aa8.44□□□□□ -1.06
DNMT1-222ENST00000590619 ZNF697Q5TEC3 545 aa8.44□□□□□ -1.06
DNMT1-222ENST00000590619 ANKRD23Q86SG2 305 aa8.44□□□□□ -1.06
DNMT1-222ENST00000590619 ANKLE1Q8NAG6 615 aa8.44□□□□□ -1.06
DNMT1-222ENST00000590619 MYLIPQ8WY64 445 aa8.44□□□□□ -1.06
DNMT1-222ENST00000590619 TMEM39BQ9GZU3 492 aa8.44□□□□□ -1.06
DNMT1-222ENST00000590619 TDRD3Q9H7E2 651 aaKnown RBP8.44□□□□□ -1.06
DNMT1-222ENST00000590619 TCP10L2B9ZVM9 353 aa8.43□□□□□ -1.06
DNMT1-222ENST00000590619 PCCAP05165 728 aaPredicted RBP8.43□□□□□ -1.06
DNMT1-222ENST00000590619 PPIL2Q13356 520 aa8.43□□□□□ -1.06
DNMT1-222ENST00000590619 IRF5Q13568 498 aa8.43□□□□□ -1.06
DNMT1-222ENST00000590619 MOGSQ13724 837 aa8.43□□□□□ -1.06
DNMT1-222ENST00000590619 SPDYE2Q495Y8 402 aa8.43□□□□□ -1.06
DNMT1-222ENST00000590619 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.43□□□□□ -1.06
DNMT1-222ENST00000590619 TTLL11Q8NHH1 800 aa8.43□□□□□ -1.06
DNMT1-222ENST00000590619 CDC5LQ99459 802 aaKnown RBP8.43□□□□□ -1.06
DNMT1-222ENST00000590619 C11orf49Q9H6J7 331 aa8.43□□□□□ -1.06
DNMT1-222ENST00000590619 BABAM1Q9NWV8 329 aa8.43□□□□□ -1.06
DNMT1-222ENST00000590619 FAM205AQ6ZU69 1335 aa8.43□□□□□ -1.06
DNMT1-222ENST00000590619 SNAP23O00161 211 aa8.42□□□□□ -1.06
DNMT1-222ENST00000590619 CYP2C8P10632 490 aa8.42□□□□□ -1.06
DNMT1-222ENST00000590619 PPATQ06203 517 aa8.42□□□□□ -1.06
DNMT1-222ENST00000590619 TNFAIP1Q13829 316 aa8.42□□□□□ -1.06
DNMT1-222ENST00000590619 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
DNMT1-222ENST00000590619 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.42□□□□□ -1.06
DNMT1-222ENST00000590619 TTYH1Q9H313 450 aaPredicted RBP8.42□□□□□ -1.06
DNMT1-222ENST00000590619 ALPK3Q96L96 1907 aa8.41□□□□□ -1.06
DNMT1-222ENST00000590619 SYNGAP1Q96PV0 1343 aa8.41□□□□□ -1.06
DNMT1-222ENST00000590619 PPP2R1AP30153 589 aa8.41□□□□□ -1.06
DNMT1-222ENST00000590619 FKBP1AP62942 108 aaKnown RBP8.41□□□□□ -1.06
DNMT1-222ENST00000590619 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
DNMT1-222ENST00000590619 CCDC191Q8NCU4 936 aa8.41□□□□□ -1.06
DNMT1-222ENST00000590619 MYD88Q99836 296 aa8.41□□□□□ -1.06
DNMT1-222ENST00000590619 GREM2Q9H772 168 aa8.41□□□□□ -1.06
DNMT1-222ENST00000590619 DBF4Q9UBU7 674 aaPredicted RBP8.41□□□□□ -1.06
DNMT1-222ENST00000590619 JAG2Q9Y219 1238 aa8.41□□□□□ -1.06
DNMT1-222ENST00000590619 LAMA2P24043 3122 aaKnown RBP8.4□□□□□ -1.06
DNMT1-222ENST00000590619 PFASO15067 1338 aa8.4□□□□□ -1.06
DNMT1-222ENST00000590619 NEFMP07197 916 aa8.4□□□□□ -1.06
DNMT1-222ENST00000590619 IL1R1P14778 569 aa8.4□□□□□ -1.06
DNMT1-222ENST00000590619 DZIP1LQ8IYY4 767 aaKnown RBP8.4□□□□□ -1.06
DNMT1-222ENST00000590619 USP38Q8NB14 1042 aa8.4□□□□□ -1.06
DNMT1-222ENST00000590619 WRNIP1Q96S55 665 aa8.4□□□□□ -1.06
DNMT1-222ENST00000590619 ANKRD2Q9GZV1 360 aa8.4□□□□□ -1.06
DNMT1-222ENST00000590619 HYPKQ9NX55 129 aa8.4□□□□□ -1.06
DNMT1-222ENST00000590619 OGDHLQ9ULD0 1010 aa8.4□□□□□ -1.06
DNMT1-222ENST00000590619 KCNH4Q9UQ05 1017 aa8.4□□□□□ -1.06
DNMT1-222ENST00000590619 CHL1O00533 1208 aa8.39□□□□□ -1.07
DNMT1-222ENST00000590619 TNPO2O14787 897 aaKnown RBP8.39□□□□□ -1.07
DNMT1-222ENST00000590619 FOSL2P15408 326 aa8.39□□□□□ -1.07
DNMT1-222ENST00000590619 CTSWP56202 376 aa8.39□□□□□ -1.07
DNMT1-222ENST00000590619 TRIM32Q13049 653 aa8.39□□□□□ -1.07
DNMT1-222ENST00000590619 SHHQ15465 462 aa8.39□□□□□ -1.07
DNMT1-222ENST00000590619 LRRC26Q2I0M4 334 aa8.39□□□□□ -1.07
DNMT1-222ENST00000590619 HDGFL1Q5TGJ6 251 aa8.39□□□□□ -1.07
DNMT1-222ENST00000590619 C15orf52Q6ZUT6 534 aaKnown RBP8.39□□□□□ -1.07
DNMT1-222ENST00000590619 CWC25Q9NXE8 425 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-222ENST00000590619 SERPINA10Q9UK55 444 aa8.39□□□□□ -1.07
DNMT1-222ENST00000590619 TAOK2Q9UL54 1235 aa8.39□□□□□ -1.07
DNMT1-222ENST00000590619 ARIH1Q9Y4X5 557 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-222ENST00000590619 COL2A1P02458 1487 aaPredicted RBP8.38□□□□□ -1.07
DNMT1-222ENST00000590619 TAF5LO75529 589 aa8.38□□□□□ -1.07
DNMT1-222ENST00000590619 COL6A1P12109 1028 aa8.38□□□□□ -1.07
DNMT1-222ENST00000590619 INPP5BP32019 993 aa8.38□□□□□ -1.07
DNMT1-222ENST00000590619 IGHMBP2P38935 993 aaKnown RBP8.38□□□□□ -1.07
DNMT1-222ENST00000590619 TNNI2P48788 182 aa8.38□□□□□ -1.07
DNMT1-222ENST00000590619 RIPK4P57078 832 aa8.38□□□□□ -1.07
DNMT1-222ENST00000590619 CHRNDQ07001 517 aa8.38□□□□□ -1.07
DNMT1-222ENST00000590619 MIGA2Q7L4E1 593 aa8.38□□□□□ -1.07
DNMT1-222ENST00000590619 SNX27Q96L92 541 aa8.38□□□□□ -1.07
DNMT1-222ENST00000590619 PARK7Q99497 189 aaKnown RBP8.38□□□□□ -1.07
DNMT1-222ENST00000590619 PHAXQ9H814 394 aaKnown RBP8.38□□□□□ -1.07
DNMT1-222ENST00000590619 HMX1Q9NP08 348 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms