RNA–Protein interactions for RNA: ENST00000590588.5

ZNF540-209, Transcript of zinc finger protein 540, humanhuman

TSL 3

Gene ZNF540, Length 563 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-209ENST00000590588 ERO1BQ86YB8 467 aa14.14□□□□□ -0.15
ZNF540-209ENST00000590588 U2AF1L4Q8WU68 220 aaKnown RBP14.14□□□□□ -0.15
ZNF540-209ENST00000590588 TEPSINQ96N21 525 aa14.14□□□□□ -0.15
ZNF540-209ENST00000590588 TRIM35Q9UPQ4 493 aa14.14□□□□□ -0.15
ZNF540-209ENST00000590588 AOX1Q06278 1338 aa14.14□□□□□ -0.15
ZNF540-209ENST00000590588 SGPL1O95470 568 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 OSBPP22059 807 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 ITGA6P23229 1130 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 CTGFP29279 349 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 BMP8BP34820 402 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 TNNI2P48788 182 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 ZNF804AQ7Z570 1209 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 COL25A1Q9BXS0 654 aaPredicted RBP14.13□□□□□ -0.15
ZNF540-209ENST00000590588 CHMP4AQ9BY43 222 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 MAP3K2Q9Y2U5 619 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 UNC80Q8N2C7 3258 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 ECM29Q5VYK3 1845 aa14.13□□□□□ -0.15
ZNF540-209ENST00000590588 IGKV5-2P06315 115 aa14.12□□□□□ -0.15
ZNF540-209ENST00000590588 NEXNQ0ZGT2 675 aa14.12□□□□□ -0.15
ZNF540-209ENST00000590588 TDRD3Q9H7E2 651 aaKnown RBP14.12□□□□□ -0.15
ZNF540-209ENST00000590588 CPA4Q9UI42 421 aa14.12□□□□□ -0.15
ZNF540-209ENST00000590588 SERPINA10Q9UK55 444 aa14.12□□□□□ -0.15
ZNF540-209ENST00000590588 MYPNQ86TC9 1320 aa14.12□□□□□ -0.15
ZNF540-209ENST00000590588 TCP10L2B9ZVM9 353 aa14.11□□□□□ -0.15
ZNF540-209ENST00000590588 IRF6O14896 467 aa14.11□□□□□ -0.15
ZNF540-209ENST00000590588 KSR2Q6VAB6 950 aa14.11□□□□□ -0.15
ZNF540-209ENST00000590588 CDAN1Q8IWY9 1227 aa14.11□□□□□ -0.15
ZNF540-209ENST00000590588 TMEM39BQ9GZU3 492 aa14.11□□□□□ -0.15
ZNF540-209ENST00000590588 MBIPQ9NS73 344 aa14.11□□□□□ -0.15
ZNF540-209ENST00000590588 IRS2Q9Y4H2 1338 aa14.11□□□□□ -0.15
ZNF540-209ENST00000590588 H7C1W4 665 aa14.1□□□□□ -0.15
ZNF540-209ENST00000590588 SNAP23O00161 211 aa14.1□□□□□ -0.15
ZNF540-209ENST00000590588 ELL2O00472 640 aaPredicted RBP14.1□□□□□ -0.15
ZNF540-209ENST00000590588 TFRCP02786 760 aaKnown RBP14.1□□□□□ -0.15
ZNF540-209ENST00000590588 PPIL2Q13356 520 aa14.1□□□□□ -0.15
ZNF540-209ENST00000590588 CCDC146Q8IYE0 955 aa14.1□□□□□ -0.15
ZNF540-209ENST00000590588 DZIP1LQ8IYY4 767 aaKnown RBP14.1□□□□□ -0.15
ZNF540-209ENST00000590588 SLAIN1Q8ND83 568 aa14.1□□□□□ -0.15
ZNF540-209ENST00000590588 GDF15Q99988 308 aa14.1□□□□□ -0.15
ZNF540-209ENST00000590588 PLA2G12BQ9BX93 195 aa14.1□□□□□ -0.15
ZNF540-209ENST00000590588 JAG2Q9Y219 1238 aa14.1□□□□□ -0.15
ZNF540-209ENST00000590588 SNCAIPQ9Y6H5 919 aa14.1□□□□□ -0.15
ZNF540-209ENST00000590588 PI4KAP2A4QPH2 592 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 TAF5LO75529 589 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 CSF1RP07333 972 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 LRIT3Q3SXY7 679 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 CCDC30Q5VVM6 783 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 Q7L0L9 218 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 UBE3BQ7Z3V4 1068 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 ANKRD23Q86SG2 305 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 PI4KAP1Q8N8J0 262 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 UNC93B1Q9H1C4 597 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 MTMR10Q9NXD2 777 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 TTF2Q9UNY4 1162 aaKnown RBP14.09□□□□□ -0.15
ZNF540-209ENST00000590588 OTOFQ9HC10 1997 aa14.09□□□□□ -0.15
ZNF540-209ENST00000590588 ZSWIM8A7E2V4 1837 aa14.08□□□□□ -0.15
ZNF540-209ENST00000590588 ANKRD18BA2A2Z9 1011 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 NEURL1BA8MQ27 555 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 PDHXO00330 501 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 FCGRTP55899 365 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 PRKCZQ05513 592 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 PPATQ06203 517 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 CWF19L2Q2TBE0 894 aaKnown RBP14.08□□□□□ -0.16
ZNF540-209ENST00000590588 ZKSCAN4Q969J2 545 aaPredicted RBP14.08□□□□□ -0.16
ZNF540-209ENST00000590588 RUNDC1Q96C34 613 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 HOOK2Q96ED9 719 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 WRNIP1Q96S55 665 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 SPEF2Q9C093 1822 aa14.08□□□□□ -0.16
ZNF540-209ENST00000590588 ZNF853P0CG23 659 aa14.07□□□□□ -0.16
ZNF540-209ENST00000590588 MFSD14BQ5SR56 506 aa14.07□□□□□ -0.16
ZNF540-209ENST00000590588 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.07□□□□□ -0.16
ZNF540-209ENST00000590588 FAM205AQ6ZU69 1335 aa14.07□□□□□ -0.16
ZNF540-209ENST00000590588 MYH3P11055 1940 aa14.06□□□□□ -0.16
ZNF540-209ENST00000590588 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
ZNF540-209ENST00000590588 CRKP46108 304 aa14.06□□□□□ -0.16
ZNF540-209ENST00000590588 NECAB2Q7Z6G3 386 aa14.06□□□□□ -0.16
ZNF540-209ENST00000590588 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.06□□□□□ -0.16
ZNF540-209ENST00000590588 PAWRQ96IZ0 340 aaKnown RBP14.06□□□□□ -0.16
ZNF540-209ENST00000590588 DEFB118Q96PH6 123 aa14.06□□□□□ -0.16
ZNF540-209ENST00000590588 VCANP13611 3396 aa14.05□□□□□ -0.16
ZNF540-209ENST00000590588 ADCY3O60266 1144 aa14.05□□□□□ -0.16
ZNF540-209ENST00000590588 BCAMP50895 628 aa14.05□□□□□ -0.16
ZNF540-209ENST00000590588 PXYLP1Q8TE99 480 aa14.05□□□□□ -0.16
ZNF540-209ENST00000590588 GABRQQ9UN88 632 aa14.05□□□□□ -0.16
ZNF540-209ENST00000590588 ADGRA2Q96PE1 1338 aa14.05□□□□□ -0.16
ZNF540-209ENST00000590588 GNAI1P63096 354 aa14.04□□□□□ -0.16
ZNF540-209ENST00000590588 IFIT5Q13325 482 aaKnown RBP14.04□□□□□ -0.16
ZNF540-209ENST00000590588 DCAF15Q66K64 600 aa14.04□□□□□ -0.16
ZNF540-209ENST00000590588 TDHQ8IZJ6 230 aa14.04□□□□□ -0.16
ZNF540-209ENST00000590588 C8orf58Q8NAV2 365 aa14.04□□□□□ -0.16
ZNF540-209ENST00000590588 TDRD7Q8NHU6 1098 aaKnown RBP14.04□□□□□ -0.16
ZNF540-209ENST00000590588 CRISPLD2Q9H0B8 497 aa14.04□□□□□ -0.16
ZNF540-209ENST00000590588 IFT57Q9NWB7 429 aa14.04□□□□□ -0.16
ZNF540-209ENST00000590588 INHAP05111 366 aa14.03□□□□□ -0.16
ZNF540-209ENST00000590588 BCRP11274 1271 aa14.03□□□□□ -0.16
ZNF540-209ENST00000590588 FLT3LGP49771 235 aa14.03□□□□□ -0.16
ZNF540-209ENST00000590588 GCKRQ14397 625 aa14.03□□□□□ -0.16
ZNF540-209ENST00000590588 FAM83AQ86UY5 434 aa14.03□□□□□ -0.16
ZNF540-209ENST00000590588 PARK7Q99497 189 aaKnown RBP14.03□□□□□ -0.16
ZNF540-209ENST00000590588 PAK6Q9NQU5 681 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms