RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MAFAQ8NHW3 353 aaPredicted RBP7.99□□□□□ -1.13
VPS25-204ENST00000589577 FAM122AQ96E09 287 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 UBE2OQ9C0C9 1292 aaKnown RBP7.99□□□□□ -1.13
VPS25-204ENST00000589577 VEZTQ9HBM0 779 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 CHPF2Q9P2E5 772 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 BIN2Q9UBW5 565 aaPredicted RBP7.99□□□□□ -1.13
VPS25-204ENST00000589577 TSPYL4Q9UJ04 414 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 SNCAIPQ9Y6H5 919 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 MAST2Q6P0Q8 1798 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 TNFRSF10AO00220 468 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 IRF6O14896 467 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 FMNL1O95466 1100 aaPredicted RBP7.98□□□□□ -1.13
VPS25-204ENST00000589577 TFRCP02786 760 aaKnown RBP7.98□□□□□ -1.13
VPS25-204ENST00000589577 INHAP05111 366 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 CETPP11597 493 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 CFAP100Q494V2 611 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 CCDC152Q4G0S7 254 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 HELBQ8NG08 1087 aaPredicted RBP7.98□□□□□ -1.13
VPS25-204ENST00000589577 JARID2Q92833 1246 aaPredicted RBP7.98□□□□□ -1.13
VPS25-204ENST00000589577 CFAP53Q96M91 514 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 PLEKHF1Q96S99 279 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 CDX2Q99626 313 aaPredicted RBP7.98□□□□□ -1.13
VPS25-204ENST00000589577 NUDCQ9Y266 331 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 PIEZO1Q92508 2521 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 FAM205AQ6ZU69 1335 aa7.98□□□□□ -1.13
VPS25-204ENST00000589577 PTPRFP10586 1907 aa7.97□□□□□ -1.13
VPS25-204ENST00000589577 AK9Q5TCS8 1911 aa7.97□□□□□ -1.13
VPS25-204ENST00000589577 ADCY3O60266 1144 aa7.97□□□□□ -1.13
VPS25-204ENST00000589577 HOXD10P28358 340 aa7.97□□□□□ -1.13
VPS25-204ENST00000589577 MAP3K9P80192 1104 aa7.97□□□□□ -1.13
VPS25-204ENST00000589577 MOGSQ13724 837 aa7.97□□□□□ -1.13
VPS25-204ENST00000589577 NFE2L2Q16236 605 aa7.97□□□□□ -1.13
VPS25-204ENST00000589577 NECAB2Q7Z6G3 386 aa7.97□□□□□ -1.13
VPS25-204ENST00000589577 BSDC1Q9NW68 430 aaPredicted RBP7.97□□□□□ -1.13
VPS25-204ENST00000589577 PLXNB2O15031 1838 aa7.96□□□□□ -1.13
VPS25-204ENST00000589577 FRMPD3Q5JV73 1810 aa7.96□□□□□ -1.13
VPS25-204ENST00000589577 F8W031 263 aaPredicted RBP7.96□□□□□ -1.14
VPS25-204ENST00000589577 MYO1BO43795 1136 aa7.96□□□□□ -1.14
VPS25-204ENST00000589577 PDE8AO60658 829 aa7.96□□□□□ -1.14
VPS25-204ENST00000589577 WDHD1O75717 1129 aaPredicted RBP7.96□□□□□ -1.14
VPS25-204ENST00000589577 PCCAP05165 728 aaPredicted RBP7.96□□□□□ -1.14
VPS25-204ENST00000589577 BCRP11274 1271 aa7.96□□□□□ -1.14
VPS25-204ENST00000589577 SNAPC2Q13487 334 aa7.96□□□□□ -1.14
VPS25-204ENST00000589577 SPDYE2Q495Y8 402 aa7.96□□□□□ -1.14
VPS25-204ENST00000589577 ERO1BQ86YB8 467 aa7.96□□□□□ -1.14
VPS25-204ENST00000589577 SYMPKQ92797 1274 aaKnown RBP7.96□□□□□ -1.14
VPS25-204ENST00000589577 TMEM39BQ9GZU3 492 aa7.96□□□□□ -1.14
VPS25-204ENST00000589577 ZNF70Q9UC06 446 aaPredicted RBP7.96□□□□□ -1.14
VPS25-204ENST00000589577 CSADQ9Y600 493 aa7.96□□□□□ -1.14
VPS25-204ENST00000589577 PFASO15067 1338 aa7.96□□□□□ -1.14
VPS25-204ENST00000589577 TMEM265A0A087WTH1 108 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 PDHXO00330 501 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 CAPN2P17655 700 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 FLT3LGP49771 235 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 FCGRTP55899 365 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 CTSWP56202 376 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 MAP3K12Q12852 859 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 PPIL2Q13356 520 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 ZNF697Q5TEC3 545 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 ANKRD23Q86SG2 305 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 ANKLE1Q8NAG6 615 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 PXYLP1Q8TE99 480 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 MYLIPQ8WY64 445 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 ZKSCAN4Q969J2 545 aaPredicted RBP7.95□□□□□ -1.14
VPS25-204ENST00000589577 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.95□□□□□ -1.14
VPS25-204ENST00000589577 GREM2Q9H772 168 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 CD209Q9NNX6 404 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 SYNGAP1Q96PV0 1343 aa7.95□□□□□ -1.14
VPS25-204ENST00000589577 CHD9Q3L8U1 2897 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 SNAP23O00161 211 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 PPP2R1AP30153 589 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 MDM2Q00987 491 aaPredicted RBP7.94□□□□□ -1.14
VPS25-204ENST00000589577 IRF5Q13568 498 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 TJAP1Q5JTD0 557 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.94□□□□□ -1.14
VPS25-204ENST00000589577 USP38Q8NB14 1042 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 TTLL11Q8NHH1 800 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 CDC5LQ99459 802 aaKnown RBP7.94□□□□□ -1.14
VPS25-204ENST00000589577 NBPF3Q9H094 633 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 TTYH1Q9H313 450 aaPredicted RBP7.94□□□□□ -1.14
VPS25-204ENST00000589577 TDRD3Q9H7E2 651 aaKnown RBP7.94□□□□□ -1.14
VPS25-204ENST00000589577 JAG2Q9Y219 1238 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 LEMD3Q9Y2U8 911 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 PHIPQ8WWQ0 1821 aa7.94□□□□□ -1.14
VPS25-204ENST00000589577 TCP10L2B9ZVM9 353 aa7.93□□□□□ -1.14
VPS25-204ENST00000589577 CYP2C8P10632 490 aa7.93□□□□□ -1.14
VPS25-204ENST00000589577 TNFAIP1Q13829 316 aa7.93□□□□□ -1.14
VPS25-204ENST00000589577 GPAT2Q6NUI2 795 aa7.93□□□□□ -1.14
VPS25-204ENST00000589577 WRNIP1Q96S55 665 aa7.93□□□□□ -1.14
VPS25-204ENST00000589577 SEMA6BQ9H3T3 888 aa7.93□□□□□ -1.14
VPS25-204ENST00000589577 C11orf49Q9H6J7 331 aa7.93□□□□□ -1.14
VPS25-204ENST00000589577 BABAM1Q9NWV8 329 aa7.93□□□□□ -1.14
VPS25-204ENST00000589577 COL6A1P12109 1028 aa7.92□□□□□ -1.14
VPS25-204ENST00000589577 HSP90B1P14625 803 aaKnown RBP7.92□□□□□ -1.14
VPS25-204ENST00000589577 IL1R1P14778 569 aa7.92□□□□□ -1.14
VPS25-204ENST00000589577 RBM5P52756 815 aaKnown RBP eCLIP7.92□□□□□ -1.14
VPS25-204ENST00000589577 FKBP1AP62942 108 aaKnown RBP7.92□□□□□ -1.14
VPS25-204ENST00000589577 HDGFL1Q5TGJ6 251 aa7.92□□□□□ -1.14
VPS25-204ENST00000589577 CCDC191Q8NCU4 936 aa7.92□□□□□ -1.14
VPS25-204ENST00000589577 MYD88Q99836 296 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms