RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 APOBEC3FQ8IUX4 373 aaKnown RBP18.42■□□□□ 0.54
HDAC5-207ENST00000588261 TDRD7Q8NHU6 1098 aaKnown RBP18.42■□□□□ 0.54
HDAC5-207ENST00000588261 DEFB129Q9H1M3 183 aa18.42■□□□□ 0.54
HDAC5-207ENST00000588261 C1orf115Q9H7X2 142 aa18.42■□□□□ 0.54
HDAC5-207ENST00000588261 COPRSQ9NQ92 184 aa18.42■□□□□ 0.54
HDAC5-207ENST00000588261 RIPOR2Q9Y4F9 1068 aa18.42■□□□□ 0.54
HDAC5-207ENST00000588261 CLRN2A0PK11 232 aa18.41■□□□□ 0.54
HDAC5-207ENST00000588261 TBC1D8O95759 1140 aa18.41■□□□□ 0.54
HDAC5-207ENST00000588261 TM4SF4P48230 202 aa18.41■□□□□ 0.54
HDAC5-207ENST00000588261 FKBP1AP62942 108 aaKnown RBP18.41■□□□□ 0.54
HDAC5-207ENST00000588261 NOM1Q5C9Z4 860 aaKnown RBP18.41■□□□□ 0.54
HDAC5-207ENST00000588261 TAF7LQ5H9L4 462 aa18.41■□□□□ 0.54
HDAC5-207ENST00000588261 PRPF38BQ5VTL8 546 aaKnown RBP18.41■□□□□ 0.54
HDAC5-207ENST00000588261 ZNF804AQ7Z570 1209 aa18.41■□□□□ 0.54
HDAC5-207ENST00000588261 FAM84BQ96KN1 310 aaPredicted RBP18.41■□□□□ 0.54
HDAC5-207ENST00000588261 HPS5Q9UPZ3 1129 aa18.41■□□□□ 0.54
HDAC5-207ENST00000588261 FAM205AQ6ZU69 1335 aa18.41■□□□□ 0.54
HDAC5-207ENST00000588261 ECM29Q5VYK3 1845 aa18.4■□□□□ 0.54
HDAC5-207ENST00000588261 NEFLP07196 543 aa18.4■□□□□ 0.54
HDAC5-207ENST00000588261 DLGAP5Q15398 846 aa18.4■□□□□ 0.54
HDAC5-207ENST00000588261 LRRC24Q50LG9 513 aa18.4■□□□□ 0.54
HDAC5-207ENST00000588261 CDAN1Q8IWY9 1227 aa18.4■□□□□ 0.54
HDAC5-207ENST00000588261 EXOC6Q8TAG9 804 aa18.4■□□□□ 0.54
HDAC5-207ENST00000588261 CLMNQ96JQ2 1002 aa18.4■□□□□ 0.54
HDAC5-207ENST00000588261 CNNM1Q9NRU3 951 aa18.4■□□□□ 0.54
HDAC5-207ENST00000588261 ANGEL1Q9UNK9 670 aaKnown RBP18.4■□□□□ 0.54
HDAC5-207ENST00000588261 COL1A1P02452 1464 aaPredicted RBP18.39■□□□□ 0.54
HDAC5-207ENST00000588261 PNMA6EA0A0J9YXQ4 647 aa18.39■□□□□ 0.53
HDAC5-207ENST00000588261 CIAO1O76071 339 aa18.39■□□□□ 0.53
HDAC5-207ENST00000588261 SREBF2Q12772 1141 aa18.39■□□□□ 0.53
HDAC5-207ENST00000588261 MAP3K11Q16584 847 aa18.39■□□□□ 0.53
HDAC5-207ENST00000588261 SPRYD7Q5W111 196 aa18.39■□□□□ 0.53
HDAC5-207ENST00000588261 VGLL2Q8N8G2 317 aa18.39■□□□□ 0.53
HDAC5-207ENST00000588261 ZNF296Q8WUU4 475 aaPredicted RBP18.39■□□□□ 0.53
HDAC5-207ENST00000588261 UBE4AQ14139 1066 aa18.38■□□□□ 0.53
HDAC5-207ENST00000588261 NBPF12Q5TAG4 269 aaPredicted RBP18.38■□□□□ 0.53
HDAC5-207ENST00000588261 ARMC9Q7Z3E5 817 aa18.38■□□□□ 0.53
HDAC5-207ENST00000588261 KLHDC4Q8TBB5 520 aa18.38■□□□□ 0.53
HDAC5-207ENST00000588261 EYA2O00167 538 aa18.37■□□□□ 0.53
HDAC5-207ENST00000588261 GJA5P36382 358 aa18.37■□□□□ 0.53
HDAC5-207ENST00000588261 ERICH6BQ5W0A0 696 aa18.37■□□□□ 0.53
HDAC5-207ENST00000588261 NOP58Q9Y2X3 529 aaKnown RBP18.37■□□□□ 0.53
HDAC5-207ENST00000588261 MROH5Q6ZUA9 1318 aa18.37■□□□□ 0.53
HDAC5-207ENST00000588261 ARAP2Q8WZ64 1704 aa18.37■□□□□ 0.53
HDAC5-207ENST00000588261 GPR25O00155 361 aa18.36■□□□□ 0.53
HDAC5-207ENST00000588261 IL15P40933 162 aaPredicted RBP18.36■□□□□ 0.53
HDAC5-207ENST00000588261 MFSD14BQ5SR56 506 aa18.36■□□□□ 0.53
HDAC5-207ENST00000588261 FBXO33Q7Z6M2 555 aa18.36■□□□□ 0.53
HDAC5-207ENST00000588261 SIRT2Q8IXJ6 389 aa18.36■□□□□ 0.53
HDAC5-207ENST00000588261 LAMB1P07942 1786 aa18.35■□□□□ 0.53
HDAC5-207ENST00000588261 USP2O75604 605 aaPredicted RBP18.35■□□□□ 0.53
HDAC5-207ENST00000588261 ALDH1A1P00352 501 aa18.35■□□□□ 0.53
HDAC5-207ENST00000588261 HIBADHP31937 336 aaKnown RBP18.35■□□□□ 0.53
HDAC5-207ENST00000588261 SPDYE2Q495Y8 402 aa18.35■□□□□ 0.53
HDAC5-207ENST00000588261 HSP90AB4PQ58FF6 505 aa18.35■□□□□ 0.53
HDAC5-207ENST00000588261 FBXO46Q6PJ61 603 aaPredicted RBP18.35■□□□□ 0.53
HDAC5-207ENST00000588261 TEPSINQ96N21 525 aa18.35■□□□□ 0.53
HDAC5-207ENST00000588261 CFHR5Q9BXR6 569 aa18.35■□□□□ 0.53
HDAC5-207ENST00000588261 VEZTQ9HBM0 779 aa18.35■□□□□ 0.53
HDAC5-207ENST00000588261 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
HDAC5-207ENST00000588261 PCDHB15Q9Y5E8 787 aa18.35■□□□□ 0.53
HDAC5-207ENST00000588261 OTOFQ9HC10 1997 aa18.35■□□□□ 0.53
HDAC5-207ENST00000588261 IGF2BP3O00425 579 aaKnown RBP eCLIP18.34■□□□□ 0.53
HDAC5-207ENST00000588261 FKTNO75072 461 aa18.34■□□□□ 0.53
HDAC5-207ENST00000588261 IRX6P78412 446 aaPredicted RBP18.34■□□□□ 0.53
HDAC5-207ENST00000588261 HDAC1Q13547 482 aaPredicted RBP18.34■□□□□ 0.53
HDAC5-207ENST00000588261 RASA3Q14644 834 aa18.34■□□□□ 0.53
HDAC5-207ENST00000588261 TDRD3Q9H7E2 651 aaKnown RBP18.34■□□□□ 0.53
HDAC5-207ENST00000588261 ZNF70Q9UC06 446 aaPredicted RBP18.34■□□□□ 0.53
HDAC5-207ENST00000588261 PPP2R3BQ9Y5P8 575 aa18.34■□□□□ 0.53
HDAC5-207ENST00000588261 INHBEP58166 350 aa18.33■□□□□ 0.52
HDAC5-207ENST00000588261 CAP1Q01518 475 aa18.33■□□□□ 0.52
HDAC5-207ENST00000588261 ATG9AQ7Z3C6 839 aa18.33■□□□□ 0.52
HDAC5-207ENST00000588261 WNK4Q96J92 1243 aa18.33■□□□□ 0.52
HDAC5-207ENST00000588261 TTF2Q9UNY4 1162 aaKnown RBP18.33■□□□□ 0.52
HDAC5-207ENST00000588261 FGFR2P21802 821 aa18.32■□□□□ 0.52
HDAC5-207ENST00000588261 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.52
HDAC5-207ENST00000588261 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
HDAC5-207ENST00000588261 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.32■□□□□ 0.52
HDAC5-207ENST00000588261 SERPINA10Q9UK55 444 aa18.32■□□□□ 0.52
HDAC5-207ENST00000588261 PA2G4Q9UQ80 394 aaKnown RBP18.32■□□□□ 0.52
HDAC5-207ENST00000588261 HTTP42858 3142 aa18.31■□□□□ 0.52
HDAC5-207ENST00000588261 SURF6O75683 361 aaKnown RBP18.31■□□□□ 0.52
HDAC5-207ENST00000588261 PDE8BO95263 885 aa18.31■□□□□ 0.52
HDAC5-207ENST00000588261 CRKP46108 304 aa18.31■□□□□ 0.52
HDAC5-207ENST00000588261 BCAMP50895 628 aa18.31■□□□□ 0.52
HDAC5-207ENST00000588261 RBM5P52756 815 aaKnown RBP eCLIP18.31■□□□□ 0.52
HDAC5-207ENST00000588261 IFNL1Q8IU54 200 aa18.31■□□□□ 0.52
HDAC5-207ENST00000588261 GCC1Q96CN9 775 aa18.31■□□□□ 0.52
HDAC5-207ENST00000588261 PTPN18Q99952 460 aa18.31■□□□□ 0.52
HDAC5-207ENST00000588261 RAB11FIP3O75154 756 aa18.3■□□□□ 0.52
HDAC5-207ENST00000588261 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
HDAC5-207ENST00000588261 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
HDAC5-207ENST00000588261 SLC10A4Q96EP9 437 aa18.3■□□□□ 0.52
HDAC5-207ENST00000588261 TMEM39BQ9GZU3 492 aa18.3■□□□□ 0.52
HDAC5-207ENST00000588261 SIL1Q9H173 461 aa18.3■□□□□ 0.52
HDAC5-207ENST00000588261 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
HDAC5-207ENST00000588261 DCTPP1Q9H773 170 aa18.3■□□□□ 0.52
HDAC5-207ENST00000588261 MANSC4A6NHS7 340 aaPredicted RBP18.29■□□□□ 0.52
HDAC5-207ENST00000588261 MYO1BO43795 1136 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms