RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 TEPSINQ96N21 525 aa16.73■□□□□ 0.27
PKN1-211ENST00000588200 TESPA1A2RU30 521 aaPredicted RBP16.72■□□□□ 0.27
PKN1-211ENST00000588200 EYA2O00167 538 aa16.72■□□□□ 0.27
PKN1-211ENST00000588200 TBC1D8O95759 1140 aa16.72■□□□□ 0.27
PKN1-211ENST00000588200 CRKP46108 304 aa16.72■□□□□ 0.27
PKN1-211ENST00000588200 RBM5P52756 815 aaKnown RBP eCLIP16.72■□□□□ 0.27
PKN1-211ENST00000588200 PRKG1Q13976 671 aa16.72■□□□□ 0.27
PKN1-211ENST00000588200 PUM3Q15397 648 aaKnown RBP16.72■□□□□ 0.27
PKN1-211ENST00000588200 VPS37DQ86XT2 251 aa16.72■□□□□ 0.27
PKN1-211ENST00000588200 CDCA7LQ96GN5 454 aa16.72■□□□□ 0.27
PKN1-211ENST00000588200 VEZTQ9HBM0 779 aa16.72■□□□□ 0.27
PKN1-211ENST00000588200 HDAC5Q9UQL6 1122 aa16.72■□□□□ 0.27
PKN1-211ENST00000588200 JAG2Q9Y219 1238 aa16.72■□□□□ 0.27
PKN1-211ENST00000588200 CIAO1O76071 339 aa16.71■□□□□ 0.27
PKN1-211ENST00000588200 IFIT1P09914 478 aaKnown RBP16.71■□□□□ 0.27
PKN1-211ENST00000588200 IFNL1Q8IU54 200 aa16.71■□□□□ 0.27
PKN1-211ENST00000588200 WNK4Q96J92 1243 aa16.71■□□□□ 0.27
PKN1-211ENST00000588200 ZDHHC15Q96MV8 337 aa16.71■□□□□ 0.27
PKN1-211ENST00000588200 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
PKN1-211ENST00000588200 SMC4Q9NTJ3 1288 aa16.71■□□□□ 0.27
PKN1-211ENST00000588200 TNNI2P48788 182 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 HHIPL2Q6UWX4 724 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 ATG9AQ7Z3C6 839 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 LPIN2Q92539 896 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 ARHGAP45Q92619 1136 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 CLMNQ96JQ2 1002 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 FZD1Q9UP38 647 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 MAST3O60307 1309 aa16.7■□□□□ 0.26
PKN1-211ENST00000588200 FKTNO75072 461 aa16.69■□□□□ 0.26
PKN1-211ENST00000588200 BCAMP50895 628 aa16.69■□□□□ 0.26
PKN1-211ENST00000588200 GRIK5Q16478 980 aa16.69■□□□□ 0.26
PKN1-211ENST00000588200 TEKT1Q969V4 418 aa16.69■□□□□ 0.26
PKN1-211ENST00000588200 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
PKN1-211ENST00000588200 OTOFQ9HC10 1997 aa16.69■□□□□ 0.26
PKN1-211ENST00000588200 MYH13Q9UKX3 1938 aa16.68■□□□□ 0.26
PKN1-211ENST00000588200 MKRN3Q13064 507 aaKnown RBP16.68■□□□□ 0.26
PKN1-211ENST00000588200 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
PKN1-211ENST00000588200 FBXO46Q6PJ61 603 aaPredicted RBP16.68■□□□□ 0.26
PKN1-211ENST00000588200 WDR66Q8TBY9 1149 aa16.68■□□□□ 0.26
PKN1-211ENST00000588200 HPS5Q9UPZ3 1129 aa16.68■□□□□ 0.26
PKN1-211ENST00000588200 RPAP1Q9BWH6 1393 aaPredicted RBP16.67■□□□□ 0.26
PKN1-211ENST00000588200 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
PKN1-211ENST00000588200 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
PKN1-211ENST00000588200 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
PKN1-211ENST00000588200 SLC5A1P13866 664 aa16.67■□□□□ 0.26
PKN1-211ENST00000588200 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
PKN1-211ENST00000588200 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.67■□□□□ 0.26
PKN1-211ENST00000588200 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.26
PKN1-211ENST00000588200 R3HDMLQ9H3Y0 253 aa16.67■□□□□ 0.26
PKN1-211ENST00000588200 COPRSQ9NQ92 184 aa16.67■□□□□ 0.26
PKN1-211ENST00000588200 NOB1Q9ULX3 412 aaKnown RBP16.67■□□□□ 0.26
PKN1-211ENST00000588200 BRCA2P51587 3418 aa16.67■□□□□ 0.26
PKN1-211ENST00000588200 GJA5P36382 358 aa16.66■□□□□ 0.26
PKN1-211ENST00000588200 RARSP54136 660 aaKnown RBP16.66■□□□□ 0.26
PKN1-211ENST00000588200 MAP3K9P80192 1104 aa16.66■□□□□ 0.26
PKN1-211ENST00000588200 INTS3Q68E01 1043 aaKnown RBP16.66■□□□□ 0.26
PKN1-211ENST00000588200 HOOK2Q96ED9 719 aa16.66■□□□□ 0.26
PKN1-211ENST00000588200 MS4A4AQ96JQ5 239 aa16.66■□□□□ 0.26
PKN1-211ENST00000588200 TMEM39BQ9GZU3 492 aa16.66■□□□□ 0.26
PKN1-211ENST00000588200 IQSEC3Q9UPP2 1182 aaPredicted RBP16.66■□□□□ 0.26
PKN1-211ENST00000588200 MKI67P46013 3256 aaKnown RBP16.66■□□□□ 0.26
PKN1-211ENST00000588200 SALL1Q9NSC2 1324 aa16.66■□□□□ 0.26
PKN1-211ENST00000588200 SEMA3EO15041 775 aa16.65■□□□□ 0.26
PKN1-211ENST00000588200 IL15P40933 162 aaPredicted RBP16.65■□□□□ 0.26
PKN1-211ENST00000588200 CHAF1AQ13111 956 aaPredicted RBP16.65■□□□□ 0.26
PKN1-211ENST00000588200 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
PKN1-211ENST00000588200 MTX1Q13505 466 aa16.64■□□□□ 0.25
PKN1-211ENST00000588200 OPTNQ96CV9 577 aa16.64■□□□□ 0.25
PKN1-211ENST00000588200 PTPN18Q99952 460 aa16.64■□□□□ 0.25
PKN1-211ENST00000588200 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
PKN1-211ENST00000588200 CEP126Q9P2H0 1117 aa16.64■□□□□ 0.25
PKN1-211ENST00000588200 PDE4DIPQ5VU43 2346 aa16.64■□□□□ 0.25
PKN1-211ENST00000588200 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
PKN1-211ENST00000588200 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
PKN1-211ENST00000588200 PDS5AQ29RF7 1337 aaKnown RBP16.63■□□□□ 0.25
PKN1-211ENST00000588200 SPDYE5A6NIY4 337 aa16.62■□□□□ 0.25
PKN1-211ENST00000588200 VGLL4Q14135 290 aa16.62■□□□□ 0.25
PKN1-211ENST00000588200 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
PKN1-211ENST00000588200 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
PKN1-211ENST00000588200 GNL3LQ9NVN8 582 aaKnown RBP16.62■□□□□ 0.25
PKN1-211ENST00000588200 CSADQ9Y600 493 aa16.62■□□□□ 0.25
PKN1-211ENST00000588200 GNAI3P08754 354 aa16.61■□□□□ 0.25
PKN1-211ENST00000588200 GTF2A2P52657 109 aa16.61■□□□□ 0.25
PKN1-211ENST00000588200 CRHR2Q13324 411 aa16.61■□□□□ 0.25
PKN1-211ENST00000588200 FAM151AQ8WW52 585 aa16.61■□□□□ 0.25
PKN1-211ENST00000588200 ERO1AQ96HE7 468 aa16.61■□□□□ 0.25
PKN1-211ENST00000588200 DENND2AQ9ULE3 1009 aa16.61■□□□□ 0.25
PKN1-211ENST00000588200 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
PKN1-211ENST00000588200 DCAF15Q66K64 600 aa16.6■□□□□ 0.25
PKN1-211ENST00000588200 OTOP1Q7RTM1 612 aa16.6■□□□□ 0.25
PKN1-211ENST00000588200 ERO1BQ86YB8 467 aa16.6■□□□□ 0.25
PKN1-211ENST00000588200 BRI3BPQ8WY22 251 aa16.6■□□□□ 0.25
PKN1-211ENST00000588200 MEIS3Q99687 375 aa16.6■□□□□ 0.25
PKN1-211ENST00000588200 ZNF112Q9UJU3 913 aa16.6■□□□□ 0.25
PKN1-211ENST00000588200 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
PKN1-211ENST00000588200 SOX10P56693 466 aa16.59■□□□□ 0.25
PKN1-211ENST00000588200 SP3Q02447 781 aa16.59■□□□□ 0.25
PKN1-211ENST00000588200 ZGPATQ8N5A5 531 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms