RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ZNF594Q96JF6 807 aaPredicted RBP9.83□□□□□ -0.84
VMP1-204ENST00000587259 CD209Q9NNX6 404 aa9.83□□□□□ -0.84
VMP1-204ENST00000587259 TRIM17Q9Y577 477 aa9.83□□□□□ -0.84
VMP1-204ENST00000587259 MKI67P46013 3256 aaKnown RBP9.83□□□□□ -0.84
VMP1-204ENST00000587259 IRS2Q9Y4H2 1338 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 MYH3P11055 1940 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 F6X3S4 739 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 PLIN1O60240 522 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
VMP1-204ENST00000587259 SREBF2Q12772 1141 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 DLGAP5Q15398 846 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 PKN2Q16513 984 aaKnown RBP9.82□□□□□ -0.84
VMP1-204ENST00000587259 TWISTNBQ3B726 338 aaPredicted RBP9.82□□□□□ -0.84
VMP1-204ENST00000587259 OTOP1Q7RTM1 612 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 APOBEC3FQ8IUX4 373 aaKnown RBP9.82□□□□□ -0.84
VMP1-204ENST00000587259 CD99L2Q8TCZ2 262 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 SLC10A4Q96EP9 437 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 PRMT6Q96LA8 375 aaPredicted RBP9.82□□□□□ -0.84
VMP1-204ENST00000587259 MPHOSPH8Q99549 860 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 STK31Q9BXU1 1019 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 VEZTQ9HBM0 779 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 LEMD3Q9Y2U8 911 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 CHMP3Q9Y3E7 222 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 MYO3BQ8WXR4 1341 aa9.82□□□□□ -0.84
VMP1-204ENST00000587259 IPO8O15397 1037 aaKnown RBP9.81□□□□□ -0.84
VMP1-204ENST00000587259 CSF1RP07333 972 aa9.81□□□□□ -0.84
VMP1-204ENST00000587259 FLIIQ13045 1269 aa9.81□□□□□ -0.84
VMP1-204ENST00000587259 FKBP5Q13451 457 aaPredicted RBP9.81□□□□□ -0.84
VMP1-204ENST00000587259 CFAP100Q494V2 611 aa9.81□□□□□ -0.84
VMP1-204ENST00000587259 EPHA10Q5JZY3 1008 aa9.81□□□□□ -0.84
VMP1-204ENST00000587259 WNK4Q96J92 1243 aa9.81□□□□□ -0.84
VMP1-204ENST00000587259 PTPN18Q99952 460 aa9.81□□□□□ -0.84
VMP1-204ENST00000587259 CHMP4AQ9BY43 222 aa9.81□□□□□ -0.84
VMP1-204ENST00000587259 CHMP4BQ9H444 224 aaKnown RBP9.81□□□□□ -0.84
VMP1-204ENST00000587259 PCDH10Q9P2E7 1040 aa9.81□□□□□ -0.84
VMP1-204ENST00000587259 CENPFP49454 3210 aa9.81□□□□□ -0.84
VMP1-204ENST00000587259 ECM2O94769 699 aaPredicted RBP9.8□□□□□ -0.84
VMP1-204ENST00000587259 MYCP01106 439 aaPredicted RBP9.8□□□□□ -0.84
VMP1-204ENST00000587259 RBM5P52756 815 aaKnown RBP eCLIP9.8□□□□□ -0.84
VMP1-204ENST00000587259 FOXO4P98177 505 aa9.8□□□□□ -0.84
VMP1-204ENST00000587259 CRHR2Q13324 411 aa9.8□□□□□ -0.84
VMP1-204ENST00000587259 IFNLR1Q8IU57 520 aaPredicted RBP9.8□□□□□ -0.84
VMP1-204ENST00000587259 DNAAF4Q8WXU2 420 aa9.8□□□□□ -0.84
VMP1-204ENST00000587259 PLA2G12BQ9BX93 195 aa9.8□□□□□ -0.84
VMP1-204ENST00000587259 ANKRD2Q9GZV1 360 aa9.8□□□□□ -0.84
VMP1-204ENST00000587259 ELP3Q9H9T3 547 aa9.8□□□□□ -0.84
VMP1-204ENST00000587259 PCDHB8Q9UN66 801 aa9.8□□□□□ -0.84
VMP1-204ENST00000587259 ANKRD18BA2A2Z9 1011 aa9.79□□□□□ -0.84
VMP1-204ENST00000587259 USP2O75604 605 aaPredicted RBP9.79□□□□□ -0.84
VMP1-204ENST00000587259 EN2P19622 333 aaPredicted RBP9.79□□□□□ -0.84
VMP1-204ENST00000587259 EXOSC9Q06265 439 aaKnown RBP9.79□□□□□ -0.84
VMP1-204ENST00000587259 GRIK5Q16478 980 aa9.79□□□□□ -0.84
VMP1-204ENST00000587259 ZKSCAN2Q63HK3 967 aa9.79□□□□□ -0.84
VMP1-204ENST00000587259 TMEM106CQ9BVX2 250 aa9.79□□□□□ -0.84
VMP1-204ENST00000587259 SMC4Q9NTJ3 1288 aa9.79□□□□□ -0.84
VMP1-204ENST00000587259 BRCA2P51587 3418 aa9.78□□□□□ -0.84
VMP1-204ENST00000587259 MANSC4A6NHS7 340 aaPredicted RBP9.78□□□□□ -0.84
VMP1-204ENST00000587259 GYG1P46976 350 aa9.78□□□□□ -0.84
VMP1-204ENST00000587259 RASA3Q14644 834 aa9.78□□□□□ -0.84
VMP1-204ENST00000587259 NOM1Q5C9Z4 860 aaKnown RBP9.78□□□□□ -0.84
VMP1-204ENST00000587259 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
VMP1-204ENST00000587259 LMBR1LQ6UX01 489 aa9.78□□□□□ -0.84
VMP1-204ENST00000587259 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
VMP1-204ENST00000587259 EXOC6Q8TAG9 804 aa9.78□□□□□ -0.84
VMP1-204ENST00000587259 CRBNQ96SW2 442 aa9.78□□□□□ -0.84
VMP1-204ENST00000587259 CFHR5Q9BXR6 569 aa9.78□□□□□ -0.84
VMP1-204ENST00000587259 PUS3Q9BZE2 481 aaKnown RBP9.78□□□□□ -0.84
VMP1-204ENST00000587259 TDRD3Q9H7E2 651 aaKnown RBP9.78□□□□□ -0.84
VMP1-204ENST00000587259 IQSEC3Q9UPP2 1182 aaPredicted RBP9.78□□□□□ -0.84
VMP1-204ENST00000587259 A0A1B0GUL6 1792 aa9.78□□□□□ -0.84
VMP1-204ENST00000587259 TCP10L2B9ZVM9 353 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 BCAR3O75815 825 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 SEC24BO95487 1268 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 IL1R1P14778 569 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 CACNB3P54284 484 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 IFIT5Q13325 482 aaKnown RBP9.77□□□□□ -0.85
VMP1-204ENST00000587259 MAP3K11Q16584 847 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 ZNF804AQ7Z570 1209 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 LINS1Q8NG48 757 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 ARHGAP45Q92619 1136 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 OPTNQ96CV9 577 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 TMEM39BQ9GZU3 492 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 ZNF70Q9UC06 446 aaPredicted RBP9.77□□□□□ -0.85
VMP1-204ENST00000587259 COLQQ9Y215 455 aaPredicted RBP9.77□□□□□ -0.85
VMP1-204ENST00000587259 PTPN22Q9Y2R2 807 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 OTOFQ9HC10 1997 aa9.77□□□□□ -0.85
VMP1-204ENST00000587259 PPP1R12BO60237 982 aaPredicted RBP9.76□□□□□ -0.85
VMP1-204ENST00000587259 VAMP4O75379 141 aa9.76□□□□□ -0.85
VMP1-204ENST00000587259 ALDH1A1P00352 501 aa9.76□□□□□ -0.85
VMP1-204ENST00000587259 ZBTB48P10074 688 aaPredicted RBP9.76□□□□□ -0.85
VMP1-204ENST00000587259 GSE1Q14687 1217 aa9.76□□□□□ -0.85
VMP1-204ENST00000587259 HABP4Q5JVS0 413 aaKnown RBP9.76□□□□□ -0.85
VMP1-204ENST00000587259 BEND3Q5T5X7 828 aa9.76□□□□□ -0.85
VMP1-204ENST00000587259 CENPQQ7L2Z9 268 aaPredicted RBP9.76□□□□□ -0.85
VMP1-204ENST00000587259 MTMR14Q8NCE2 650 aa9.76□□□□□ -0.85
VMP1-204ENST00000587259 BRI3BPQ8WY22 251 aa9.76□□□□□ -0.85
VMP1-204ENST00000587259 TEPSINQ96N21 525 aa9.76□□□□□ -0.85
VMP1-204ENST00000587259 ARHGAP39Q9C0H5 1083 aa9.76□□□□□ -0.85
VMP1-204ENST00000587259 ZSWIM8A7E2V4 1837 aa9.76□□□□□ -0.85
VMP1-204ENST00000587259 KIAA0100Q14667 2235 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms