RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 MAST3O60307 1309 aa13.3□□□□□ -0.28
MBD3-203ENST00000585903 F8W031 263 aaPredicted RBP13.29□□□□□ -0.28
MBD3-203ENST00000585903 PLIN1O60240 522 aa13.29□□□□□ -0.28
MBD3-203ENST00000585903 USP2O75604 605 aaPredicted RBP13.29□□□□□ -0.28
MBD3-203ENST00000585903 TNNI2P48788 182 aa13.29□□□□□ -0.28
MBD3-203ENST00000585903 RBM5P52756 815 aaKnown RBP eCLIP13.29□□□□□ -0.28
MBD3-203ENST00000585903 NBPF12Q5TAG4 269 aaPredicted RBP13.29□□□□□ -0.28
MBD3-203ENST00000585903 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
MBD3-203ENST00000585903 ANKRD44Q8N8A2 993 aa13.29□□□□□ -0.28
MBD3-203ENST00000585903 HOOK2Q96ED9 719 aa13.29□□□□□ -0.28
MBD3-203ENST00000585903 VEZTQ9HBM0 779 aa13.29□□□□□ -0.28
MBD3-203ENST00000585903 ZNF70Q9UC06 446 aaPredicted RBP13.29□□□□□ -0.28
MBD3-203ENST00000585903 MYH13Q9UKX3 1938 aa13.29□□□□□ -0.28
MBD3-203ENST00000585903 CLRN2A0PK11 232 aa13.28□□□□□ -0.28
MBD3-203ENST00000585903 GYG1P46976 350 aa13.28□□□□□ -0.28
MBD3-203ENST00000585903 PRKG1Q13976 671 aa13.28□□□□□ -0.28
MBD3-203ENST00000585903 PUM3Q15397 648 aaKnown RBP13.28□□□□□ -0.28
MBD3-203ENST00000585903 TEPSINQ96N21 525 aa13.28□□□□□ -0.28
MBD3-203ENST00000585903 PUS3Q9BZE2 481 aaKnown RBP13.28□□□□□ -0.28
MBD3-203ENST00000585903 USP44Q9H0E7 712 aa13.28□□□□□ -0.28
MBD3-203ENST00000585903 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
MBD3-203ENST00000585903 RPAP1Q9BWH6 1393 aaPredicted RBP13.28□□□□□ -0.28
MBD3-203ENST00000585903 RBBP6Q7Z6E9 1792 aaKnown RBP13.27□□□□□ -0.28
MBD3-203ENST00000585903 FGFR2P21802 821 aa13.27□□□□□ -0.29
MBD3-203ENST00000585903 CRKP46108 304 aa13.27□□□□□ -0.29
MBD3-203ENST00000585903 SLFN5Q08AF3 891 aa13.27□□□□□ -0.29
MBD3-203ENST00000585903 METTL24Q5JXM2 366 aa13.27□□□□□ -0.29
MBD3-203ENST00000585903 INTS3Q68E01 1043 aaKnown RBP13.27□□□□□ -0.29
MBD3-203ENST00000585903 FAM83AQ86UY5 434 aa13.27□□□□□ -0.29
MBD3-203ENST00000585903 TEKT1Q969V4 418 aa13.27□□□□□ -0.29
MBD3-203ENST00000585903 CLMNQ96JQ2 1002 aa13.27□□□□□ -0.29
MBD3-203ENST00000585903 ZDHHC15Q96MV8 337 aa13.27□□□□□ -0.29
MBD3-203ENST00000585903 ZCCHC17Q9NP64 241 aaKnown RBP13.27□□□□□ -0.29
MBD3-203ENST00000585903 PCDHAC2Q9Y5I4 1007 aa13.27□□□□□ -0.29
MBD3-203ENST00000585903 IGF2BP3O00425 579 aaKnown RBP eCLIP13.26□□□□□ -0.29
MBD3-203ENST00000585903 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
MBD3-203ENST00000585903 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
MBD3-203ENST00000585903 HHIPL2Q6UWX4 724 aa13.26□□□□□ -0.29
MBD3-203ENST00000585903 SSH1Q8WYL5 1049 aa13.26□□□□□ -0.29
MBD3-203ENST00000585903 ERO1AQ96HE7 468 aa13.26□□□□□ -0.29
MBD3-203ENST00000585903 TDRD3Q9H7E2 651 aaKnown RBP13.26□□□□□ -0.29
MBD3-203ENST00000585903 AOX1Q06278 1338 aa13.25□□□□□ -0.29
MBD3-203ENST00000585903 GTF2A2P52657 109 aa13.25□□□□□ -0.29
MBD3-203ENST00000585903 ARHGEF6Q15052 776 aa13.25□□□□□ -0.29
MBD3-203ENST00000585903 LRRC24Q50LG9 513 aa13.25□□□□□ -0.29
MBD3-203ENST00000585903 TRMT2AQ8IZ69 625 aaKnown RBP13.25□□□□□ -0.29
MBD3-203ENST00000585903 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.25□□□□□ -0.29
MBD3-203ENST00000585903 LPIN2Q92539 896 aa13.25□□□□□ -0.29
MBD3-203ENST00000585903 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
MBD3-203ENST00000585903 TMOD2Q9NZR1 351 aa13.25□□□□□ -0.29
MBD3-203ENST00000585903 CENPFP49454 3210 aa13.25□□□□□ -0.29
MBD3-203ENST00000585903 EYA2O00167 538 aa13.24□□□□□ -0.29
MBD3-203ENST00000585903 FRAT2O75474 233 aaPredicted RBP13.24□□□□□ -0.29
MBD3-203ENST00000585903 CIAO1O76071 339 aa13.24□□□□□ -0.29
MBD3-203ENST00000585903 FXR1P51114 621 aaKnown RBP eCLIP13.24□□□□□ -0.29
MBD3-203ENST00000585903 MAP3K9P80192 1104 aa13.24□□□□□ -0.29
MBD3-203ENST00000585903 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.24□□□□□ -0.29
MBD3-203ENST00000585903 WDR66Q8TBY9 1149 aa13.24□□□□□ -0.29
MBD3-203ENST00000585903 OPTNQ96CV9 577 aa13.24□□□□□ -0.29
MBD3-203ENST00000585903 R3HDMLQ9H3Y0 253 aa13.24□□□□□ -0.29
MBD3-203ENST00000585903 FZD1Q9UP38 647 aa13.24□□□□□ -0.29
MBD3-203ENST00000585903 JAG2Q9Y219 1238 aa13.24□□□□□ -0.29
MBD3-203ENST00000585903 CSADQ9Y600 493 aa13.24□□□□□ -0.29
MBD3-203ENST00000585903 BRCA2P51587 3418 aa13.23□□□□□ -0.29
MBD3-203ENST00000585903 SEMA3EO15041 775 aa13.23□□□□□ -0.29
MBD3-203ENST00000585903 SLC5A1P13866 664 aa13.23□□□□□ -0.29
MBD3-203ENST00000585903 GJA5P36382 358 aa13.23□□□□□ -0.29
MBD3-203ENST00000585903 RFX5P48382 616 aaPredicted RBP13.23□□□□□ -0.29
MBD3-203ENST00000585903 CRHR2Q13324 411 aa13.23□□□□□ -0.29
MBD3-203ENST00000585903 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
MBD3-203ENST00000585903 SZT2Q5T011 3432 aa13.23□□□□□ -0.29
MBD3-203ENST00000585903 ZBED9Q6R2W3 1325 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 SALL1Q9NSC2 1324 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 WDHD1O75717 1129 aaPredicted RBP13.22□□□□□ -0.29
MBD3-203ENST00000585903 BCAMP50895 628 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 SP3Q02447 781 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 VGLL4Q14135 290 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 DCAF15Q66K64 600 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 APOBEC3HQ6NTF7 200 aaKnown RBP13.22□□□□□ -0.29
MBD3-203ENST00000585903 PTPN18Q99952 460 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 TMEM39BQ9GZU3 492 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 TRIM17Q9Y577 477 aa13.22□□□□□ -0.29
MBD3-203ENST00000585903 KIAA0100Q14667 2235 aaKnown RBP13.21□□□□□ -0.29
MBD3-203ENST00000585903 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.29
MBD3-203ENST00000585903 GNRH1P01148 92 aa13.21□□□□□ -0.29
MBD3-203ENST00000585903 UBTFL1P0CB47 393 aaPredicted RBP13.21□□□□□ -0.29
MBD3-203ENST00000585903 ERO1BQ86YB8 467 aa13.21□□□□□ -0.29
MBD3-203ENST00000585903 ARMC5Q96C12 935 aa13.21□□□□□ -0.29
MBD3-203ENST00000585903 ELP3Q9H9T3 547 aa13.21□□□□□ -0.29
MBD3-203ENST00000585903 GNL3LQ9NVN8 582 aaKnown RBP13.21□□□□□ -0.29
MBD3-203ENST00000585903 PTPN22Q9Y2R2 807 aa13.21□□□□□ -0.29
MBD3-203ENST00000585903 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
MBD3-203ENST00000585903 CETPP11597 493 aa13.2□□□□□ -0.3
MBD3-203ENST00000585903 CHAF1AQ13111 956 aaPredicted RBP13.2□□□□□ -0.3
MBD3-203ENST00000585903 GRIK5Q16478 980 aa13.2□□□□□ -0.3
MBD3-203ENST00000585903 ATG9AQ7Z3C6 839 aa13.2□□□□□ -0.3
MBD3-203ENST00000585903 BRI3BPQ8WY22 251 aa13.2□□□□□ -0.3
MBD3-203ENST00000585903 ARHGAP45Q92619 1136 aa13.2□□□□□ -0.3
MBD3-203ENST00000585903 YTHDC1Q96MU7 727 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms