RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 C1QTNF1Q9BXJ1 281 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 TTYH1Q9H313 450 aaPredicted RBP14.24□□□□□ -0.13
CCDC47-206ENST00000584112 MAP3K2Q9Y2U5 619 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 PDE8AO60658 829 aa14.23□□□□□ -0.13
CCDC47-206ENST00000584112 OSBPP22059 807 aa14.23□□□□□ -0.13
CCDC47-206ENST00000584112 UBXN2AP68543 259 aa14.23□□□□□ -0.13
CCDC47-206ENST00000584112 MAP3K11Q16584 847 aa14.23□□□□□ -0.13
CCDC47-206ENST00000584112 CCDC152Q4G0S7 254 aa14.23□□□□□ -0.13
CCDC47-206ENST00000584112 KSR2Q6VAB6 950 aa14.23□□□□□ -0.13
CCDC47-206ENST00000584112 WDR63Q8IWG1 891 aa14.23□□□□□ -0.13
CCDC47-206ENST00000584112 CELF1Q92879 486 aaKnown RBP14.23□□□□□ -0.13
CCDC47-206ENST00000584112 TCF20Q9UGU0 1960 aaKnown RBP14.23□□□□□ -0.13
CCDC47-206ENST00000584112 FANCIQ9NVI1 1328 aa14.22□□□□□ -0.13
CCDC47-206ENST00000584112 PI4KAP2A4QPH2 592 aa14.22□□□□□ -0.13
CCDC47-206ENST00000584112 RPS8P62241 208 aaKnown RBP14.22□□□□□ -0.13
CCDC47-206ENST00000584112 NECAB2Q7Z6G3 386 aa14.22□□□□□ -0.13
CCDC47-206ENST00000584112 PI4KAP1Q8N8J0 262 aa14.22□□□□□ -0.13
CCDC47-206ENST00000584112 NECAB3Q96P71 396 aaPredicted RBP14.22□□□□□ -0.13
CCDC47-206ENST00000584112 MXD3Q9BW11 206 aa14.22□□□□□ -0.13
CCDC47-206ENST00000584112 GNRH1P01148 92 aa14.21□□□□□ -0.13
CCDC47-206ENST00000584112 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
CCDC47-206ENST00000584112 PSMC4P43686 418 aa14.21□□□□□ -0.13
CCDC47-206ENST00000584112 OTOFQ9HC10 1997 aa14.21□□□□□ -0.13
CCDC47-206ENST00000584112 MYPNQ86TC9 1320 aa14.2□□□□□ -0.14
CCDC47-206ENST00000584112 CCL15-CCL14A0A0B4J2E2 113 aa14.2□□□□□ -0.14
CCDC47-206ENST00000584112 TLR2O60603 784 aa14.2□□□□□ -0.14
CCDC47-206ENST00000584112 CCL15Q16663 113 aa14.2□□□□□ -0.14
CCDC47-206ENST00000584112 TBC1D16Q8TBP0 767 aa14.2□□□□□ -0.14
CCDC47-206ENST00000584112 OPTNQ96CV9 577 aa14.2□□□□□ -0.14
CCDC47-206ENST00000584112 EYA3Q99504 573 aa14.2□□□□□ -0.14
CCDC47-206ENST00000584112 ELP3Q9H9T3 547 aa14.2□□□□□ -0.14
CCDC47-206ENST00000584112 SALL2Q9Y467 1007 aaPredicted RBP14.2□□□□□ -0.14
CCDC47-206ENST00000584112 G3V3G9 751 aa14.19□□□□□ -0.14
CCDC47-206ENST00000584112 IGKV5-2P06315 115 aa14.19□□□□□ -0.14
CCDC47-206ENST00000584112 DCAF8Q5TAQ9 597 aa14.19□□□□□ -0.14
CCDC47-206ENST00000584112 FAM9BQ8IZU0 186 aa14.19□□□□□ -0.14
CCDC47-206ENST00000584112 SEC31BQ9NQW1 1179 aa14.19□□□□□ -0.14
CCDC47-206ENST00000584112 DNAH12Q6ZR08 3092 aa14.18□□□□□ -0.14
CCDC47-206ENST00000584112 PPP1R12BO60237 982 aaPredicted RBP14.18□□□□□ -0.14
CCDC47-206ENST00000584112 CTSWP56202 376 aa14.18□□□□□ -0.14
CCDC47-206ENST00000584112 FLIIQ13045 1269 aa14.18□□□□□ -0.14
CCDC47-206ENST00000584112 G2E3Q7L622 706 aa14.18□□□□□ -0.14
CCDC47-206ENST00000584112 APOBEC3FQ8IUX4 373 aaKnown RBP14.18□□□□□ -0.14
CCDC47-206ENST00000584112 ASB2Q96Q27 587 aa14.18□□□□□ -0.14
CCDC47-206ENST00000584112 CDC5LQ99459 802 aaKnown RBP14.18□□□□□ -0.14
CCDC47-206ENST00000584112 ZC3H12CQ9C0D7 883 aaKnown RBP14.18□□□□□ -0.14
CCDC47-206ENST00000584112 CRISPLD2Q9H0B8 497 aa14.18□□□□□ -0.14
CCDC47-206ENST00000584112 EPHX3Q9H6B9 360 aa14.18□□□□□ -0.14
CCDC47-206ENST00000584112 MYH16Q9H6N6 1097 aa14.18□□□□□ -0.14
CCDC47-206ENST00000584112 PODXL2Q9NZ53 605 aa14.18□□□□□ -0.14
CCDC47-206ENST00000584112 A0A1B0GUL6 1792 aa14.17□□□□□ -0.14
CCDC47-206ENST00000584112 NEURL1BA8MQ27 555 aa14.17□□□□□ -0.14
CCDC47-206ENST00000584112 FMNL1O95466 1100 aaPredicted RBP14.17□□□□□ -0.14
CCDC47-206ENST00000584112 PRKCZQ05513 592 aa14.17□□□□□ -0.14
CCDC47-206ENST00000584112 FKBP5Q13451 457 aaPredicted RBP14.17□□□□□ -0.14
CCDC47-206ENST00000584112 PODNQ7Z5L7 613 aa14.17□□□□□ -0.14
CCDC47-206ENST00000584112 ANKRD18AQ8IVF6 992 aa14.17□□□□□ -0.14
CCDC47-206ENST00000584112 JARID2Q92833 1246 aaPredicted RBP14.17□□□□□ -0.14
CCDC47-206ENST00000584112 DEFB129Q9H1M3 183 aa14.17□□□□□ -0.14
CCDC47-206ENST00000584112 ANKIB1Q9P2G1 1089 aa14.17□□□□□ -0.14
CCDC47-206ENST00000584112 FAM205AQ6ZU69 1335 aa14.16□□□□□ -0.14
CCDC47-206ENST00000584112 DDX60LQ5H9U9 1706 aaKnown RBP14.16□□□□□ -0.14
CCDC47-206ENST00000584112 VAMP4O75379 141 aa14.16□□□□□ -0.14
CCDC47-206ENST00000584112 USP2O75604 605 aaPredicted RBP14.16□□□□□ -0.14
CCDC47-206ENST00000584112 ELNP15502 786 aa14.16□□□□□ -0.14
CCDC47-206ENST00000584112 EXOSC9Q06265 439 aaKnown RBP14.16□□□□□ -0.14
CCDC47-206ENST00000584112 CWF19L2Q2TBE0 894 aaKnown RBP14.16□□□□□ -0.14
CCDC47-206ENST00000584112 DNAAF4Q8WXU2 420 aa14.16□□□□□ -0.14
CCDC47-206ENST00000584112 CCDC85AQ96PX6 553 aaPredicted RBP14.16□□□□□ -0.14
CCDC47-206ENST00000584112 CPA4Q9UI42 421 aa14.16□□□□□ -0.14
CCDC47-206ENST00000584112 GGA1Q9UJY5 639 aa14.16□□□□□ -0.14
CCDC47-206ENST00000584112 GABRQQ9UN88 632 aa14.16□□□□□ -0.14
CCDC47-206ENST00000584112 XDHP47989 1333 aa14.15□□□□□ -0.14
CCDC47-206ENST00000584112 UFL1O94874 794 aa14.15□□□□□ -0.14
CCDC47-206ENST00000584112 INHAP05111 366 aa14.15□□□□□ -0.14
CCDC47-206ENST00000584112 HOXD10P28358 340 aa14.15□□□□□ -0.14
CCDC47-206ENST00000584112 UBE3BQ7Z3V4 1068 aa14.15□□□□□ -0.14
CCDC47-206ENST00000584112 PPM1EQ8WY54 764 aa14.15□□□□□ -0.14
CCDC47-206ENST00000584112 ZDBF2Q9HCK1 2354 aa14.15□□□□□ -0.14
CCDC47-206ENST00000584112 USP17L3A6NCW0 530 aa14.14□□□□□ -0.15
CCDC47-206ENST00000584112 USP17L4A6NCW7 530 aa14.14□□□□□ -0.15
CCDC47-206ENST00000584112 H7C1W4 665 aa14.14□□□□□ -0.15
CCDC47-206ENST00000584112 GCKRQ14397 625 aa14.14□□□□□ -0.15
CCDC47-206ENST00000584112 USP17L1Q7RTZ2 530 aa14.14□□□□□ -0.15
CCDC47-206ENST00000584112 SLAIN1Q8ND83 568 aa14.14□□□□□ -0.15
CCDC47-206ENST00000584112 LINS1Q8NG48 757 aa14.14□□□□□ -0.15
CCDC47-206ENST00000584112 TTLL11Q8NHH1 800 aa14.14□□□□□ -0.15
CCDC47-206ENST00000584112 ATXN2LQ8WWM7 1075 aaKnown RBP14.14□□□□□ -0.15
CCDC47-206ENST00000584112 PAK6Q9NQU5 681 aaPredicted RBP14.14□□□□□ -0.15
CCDC47-206ENST00000584112 IREB2P48200 963 aaKnown RBP14.13□□□□□ -0.15
CCDC47-206ENST00000584112 NBPF12Q5TAG4 269 aaPredicted RBP14.13□□□□□ -0.15
CCDC47-206ENST00000584112 C17orf99Q6UX52 265 aa14.13□□□□□ -0.15
CCDC47-206ENST00000584112 ANKRD13AQ8IZ07 590 aa14.13□□□□□ -0.15
CCDC47-206ENST00000584112 PLA2G12BQ9BX93 195 aa14.13□□□□□ -0.15
CCDC47-206ENST00000584112 BSDC1Q9NW68 430 aaPredicted RBP14.13□□□□□ -0.15
CCDC47-206ENST00000584112 MYO9BQ13459 2157 aa14.13□□□□□ -0.15
CCDC47-206ENST00000584112 CFAP54Q96N23 3096 aa14.13□□□□□ -0.15
CCDC47-206ENST00000584112 MGAMO43451 1857 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 WDFY4Q6ZS81 3184 aa14.12□□□□□ -0.15
CCDC47-206ENST00000584112 FAM86C2PA6NEL3 165 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms