RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
MKS1-212ENST00000583577 MAP3K2Q9Y2U5 619 aa12.16□□□□□ -0.46
MKS1-212ENST00000583577 PPP1R12BO60237 982 aaPredicted RBP12.15□□□□□ -0.46
MKS1-212ENST00000583577 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
MKS1-212ENST00000583577 KIF22Q14807 665 aa12.15□□□□□ -0.46
MKS1-212ENST00000583577 DZIP1LQ8IYY4 767 aaKnown RBP12.15□□□□□ -0.46
MKS1-212ENST00000583577 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
MKS1-212ENST00000583577 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
MKS1-212ENST00000583577 TBC1D32Q96NH3 1257 aa12.15□□□□□ -0.46
MKS1-212ENST00000583577 MYD88Q99836 296 aa12.15□□□□□ -0.46
MKS1-212ENST00000583577 METTL22Q9BUU2 404 aaPredicted RBP12.15□□□□□ -0.46
MKS1-212ENST00000583577 SMC4Q9NTJ3 1288 aa12.15□□□□□ -0.46
MKS1-212ENST00000583577 RAPGEFL1Q9UHV5 662 aa12.15□□□□□ -0.46
MKS1-212ENST00000583577 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
MKS1-212ENST00000583577 ECM29Q5VYK3 1845 aa12.15□□□□□ -0.46
MKS1-212ENST00000583577 ATP5J2-PTCD1G3V325 749 aa12.14□□□□□ -0.47
MKS1-212ENST00000583577 FARP2O94887 1054 aaPredicted RBP12.14□□□□□ -0.47
MKS1-212ENST00000583577 GJA8P48165 433 aa12.14□□□□□ -0.47
MKS1-212ENST00000583577 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
MKS1-212ENST00000583577 FTSJ3Q8IY81 847 aaKnown RBP12.14□□□□□ -0.47
MKS1-212ENST00000583577 DNAAF4Q8WXU2 420 aa12.14□□□□□ -0.47
MKS1-212ENST00000583577 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
MKS1-212ENST00000583577 TESPA1A2RU30 521 aaPredicted RBP12.13□□□□□ -0.47
MKS1-212ENST00000583577 GJB1P08034 283 aa12.13□□□□□ -0.47
MKS1-212ENST00000583577 CCL5P13501 91 aa12.13□□□□□ -0.47
MKS1-212ENST00000583577 BCAMP50895 628 aa12.13□□□□□ -0.47
MKS1-212ENST00000583577 TRIM28Q13263 835 aaKnown RBP12.13□□□□□ -0.47
MKS1-212ENST00000583577 SF3B3Q15393 1217 aaKnown RBP12.13□□□□□ -0.47
MKS1-212ENST00000583577 MAP3K11Q16584 847 aa12.13□□□□□ -0.47
MKS1-212ENST00000583577 ARHGAP45Q92619 1136 aa12.13□□□□□ -0.47
MKS1-212ENST00000583577 FRAT1Q92837 279 aaPredicted RBP12.13□□□□□ -0.47
MKS1-212ENST00000583577 ISCA1Q9BUE6 129 aa12.13□□□□□ -0.47
MKS1-212ENST00000583577 RNF208Q9H0X6 261 aa12.13□□□□□ -0.47
MKS1-212ENST00000583577 DEFB129Q9H1M3 183 aa12.13□□□□□ -0.47
MKS1-212ENST00000583577 BIN2Q9UBW5 565 aaPredicted RBP12.13□□□□□ -0.47
MKS1-212ENST00000583577 SSC5DA1L4H1 1573 aa12.13□□□□□ -0.47
MKS1-212ENST00000583577 PTPRCP08575 1304 aa12.12□□□□□ -0.47
MKS1-212ENST00000583577 BDP1A6H8Y1 2624 aa12.12□□□□□ -0.47
MKS1-212ENST00000583577 PTMSP20962 102 aa12.12□□□□□ -0.47
MKS1-212ENST00000583577 L1TD1Q5T7N2 865 aaKnown RBP12.12□□□□□ -0.47
MKS1-212ENST00000583577 PODNQ7Z5L7 613 aa12.12□□□□□ -0.47
MKS1-212ENST00000583577 CCDC191Q8NCU4 936 aa12.12□□□□□ -0.47
MKS1-212ENST00000583577 PANK1Q8TE04 598 aa12.12□□□□□ -0.47
MKS1-212ENST00000583577 FAM89AQ96GI7 184 aa12.12□□□□□ -0.47
MKS1-212ENST00000583577 ELP3Q9H9T3 547 aa12.12□□□□□ -0.47
MKS1-212ENST00000583577 CWC25Q9NXE8 425 aaPredicted RBP12.12□□□□□ -0.47
MKS1-212ENST00000583577 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
MKS1-212ENST00000583577 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 CCL15-CCL14A0A0B4J2E2 113 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 IREB2P48200 963 aaKnown RBP12.11□□□□□ -0.47
MKS1-212ENST00000583577 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
MKS1-212ENST00000583577 CCL15Q16663 113 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 DACT2Q5SW24 774 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 ATF7IPQ6VMQ6 1270 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 SMC5Q8IY18 1101 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 BRI3BPQ8WY22 251 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 OPTNQ96CV9 577 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 GDF15Q99988 308 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 SPEF2Q9C093 1822 aa12.11□□□□□ -0.47
MKS1-212ENST00000583577 COL1A1P02452 1464 aaPredicted RBP12.1□□□□□ -0.47
MKS1-212ENST00000583577 F6X3S4 739 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
MKS1-212ENST00000583577 GRK4P32298 578 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 BMP8BP34820 402 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 PRMT2P55345 433 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 LRIT3Q3SXY7 679 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 RAET1EQ8TD07 263 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 U2AF1L4Q8WU68 220 aaKnown RBP12.1□□□□□ -0.47
MKS1-212ENST00000583577 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 SEC31BQ9NQW1 1179 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 ZMYND8Q9ULU4 1186 aaPredicted RBP12.1□□□□□ -0.47
MKS1-212ENST00000583577 MGAMO43451 1857 aa12.1□□□□□ -0.47
MKS1-212ENST00000583577 UNCXA6NJT0 531 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 NEURL1BA8MQ27 555 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 USP2O75604 605 aaPredicted RBP12.09□□□□□ -0.47
MKS1-212ENST00000583577 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
MKS1-212ENST00000583577 GNRH1P01148 92 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 IGKV5-2P06315 115 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 CWF19L2Q2TBE0 894 aaKnown RBP12.09□□□□□ -0.47
MKS1-212ENST00000583577 SUPT20HL1Q3ZLR7 823 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 NBPF12Q5TAG4 269 aaPredicted RBP12.09□□□□□ -0.47
MKS1-212ENST00000583577 KIAA0825Q8IV33 1275 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 ANKRD13AQ8IZ07 590 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 ZBTB38Q8NAP3 1195 aaPredicted RBP12.09□□□□□ -0.47
MKS1-212ENST00000583577 CNKSR2Q8WXI2 1034 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 FAM161BQ96MY7 647 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 NOB1Q9ULX3 412 aaKnown RBP12.09□□□□□ -0.47
MKS1-212ENST00000583577 RIPOR2Q9Y4F9 1068 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 PCDHB15Q9Y5E8 787 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 PIEZO1Q92508 2521 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 IRS2Q9Y4H2 1338 aa12.09□□□□□ -0.47
MKS1-212ENST00000583577 PCCAP05165 728 aaPredicted RBP12.08□□□□□ -0.48
MKS1-212ENST00000583577 PLA2G5P39877 138 aa12.08□□□□□ -0.48
MKS1-212ENST00000583577 UBXN2AP68543 259 aa12.08□□□□□ -0.48
MKS1-212ENST00000583577 C7orf61Q8IZ16 206 aa12.08□□□□□ -0.48
MKS1-212ENST00000583577 FAM122AQ96E09 287 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms