RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 SPDYE2Q495Y8 402 aa23.2■■□□□ 1.3
LIMS2-218ENST00000582671 VEZTQ9HBM0 779 aa23.2■■□□□ 1.3
LIMS2-218ENST00000582671 ZNF70Q9UC06 446 aaPredicted RBP23.2■■□□□ 1.3
LIMS2-218ENST00000582671 AKAP11Q9UKA4 1901 aa23.2■■□□□ 1.3
LIMS2-218ENST00000582671 UBE2Q2LH0YL09 131 aa23.19■■□□□ 1.3
LIMS2-218ENST00000582671 ZNF157P51786 506 aaPredicted RBP23.19■■□□□ 1.3
LIMS2-218ENST00000582671 HDLBPQ00341 1268 aaKnown RBP23.19■■□□□ 1.3
LIMS2-218ENST00000582671 G3BP1Q13283 466 aaKnown RBP eCLIP23.19■■□□□ 1.3
LIMS2-218ENST00000582671 WDR66Q8TBY9 1149 aa23.19■■□□□ 1.3
LIMS2-218ENST00000582671 XAGE2Q96GT9 111 aa23.19■■□□□ 1.3
LIMS2-218ENST00000582671 GNL3LQ9NVN8 582 aaKnown RBP23.19■■□□□ 1.3
LIMS2-218ENST00000582671 AKAP2Q9Y2D5 859 aa23.19■■□□□ 1.3
LIMS2-218ENST00000582671 AIDAQ96BJ3 306 aa23.18■■□□□ 1.3
LIMS2-218ENST00000582671 FZD1Q9UP38 647 aa23.18■■□□□ 1.3
LIMS2-218ENST00000582671 SUGT1Q9Y2Z0 365 aa23.18■■□□□ 1.3
LIMS2-218ENST00000582671 SEMA3EO15041 775 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 ZBTB22O15209 634 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 SLC10A3P09131 477 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 NF2P35240 595 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 NOGQ13253 232 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 PRKG1Q13976 671 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 TEKT1Q969V4 418 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 CCDC102AQ96A19 550 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 NEUROD6Q96NK8 337 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 MRIQ9BWK5 157 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 DENND2AQ9ULE3 1009 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 PPP2R3BQ9Y5P8 575 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 OTOFQ9HC10 1997 aa23.17■■□□□ 1.3
LIMS2-218ENST00000582671 MS4A1P11836 297 aa23.16■■□□□ 1.3
LIMS2-218ENST00000582671 PRDX5P30044 214 aa23.16■■□□□ 1.3
LIMS2-218ENST00000582671 TTLL12Q14166 644 aaPredicted RBP23.16■■□□□ 1.3
LIMS2-218ENST00000582671 RASA3Q14644 834 aa23.16■■□□□ 1.3
LIMS2-218ENST00000582671 MVPQ14764 893 aaKnown RBP23.16■■□□□ 1.3
LIMS2-218ENST00000582671 CEP85Q6P2H3 762 aa23.16■■□□□ 1.3
LIMS2-218ENST00000582671 ZDHHC15Q96MV8 337 aa23.16■■□□□ 1.3
LIMS2-218ENST00000582671 COG6Q9Y2V7 657 aa23.16■■□□□ 1.3
LIMS2-218ENST00000582671 SALL1Q9NSC2 1324 aa23.15■■□□□ 1.3
LIMS2-218ENST00000582671 SURF6O75683 361 aaKnown RBP23.15■■□□□ 1.3
LIMS2-218ENST00000582671 CTCFP49711 727 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-218ENST00000582671 RASGRF1Q13972 1273 aa23.15■■□□□ 1.3
LIMS2-218ENST00000582671 NBPF12Q5TAG4 269 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-218ENST00000582671 RASAL3Q86YV0 1011 aa23.15■■□□□ 1.3
LIMS2-218ENST00000582671 MYO5AQ9Y4I1 1855 aaKnown RBP23.15■■□□□ 1.3
LIMS2-218ENST00000582671 MAST3O60307 1309 aa23.14■■□□□ 1.3
LIMS2-218ENST00000582671 HSPA8P11142 646 aaKnown RBP23.14■■□□□ 1.29
LIMS2-218ENST00000582671 KIF23Q02241 960 aaPredicted RBP23.14■■□□□ 1.29
LIMS2-218ENST00000582671 APOBEC3HQ6NTF7 200 aaKnown RBP23.14■■□□□ 1.29
LIMS2-218ENST00000582671 HHIPL2Q6UWX4 724 aa23.14■■□□□ 1.29
LIMS2-218ENST00000582671 NOP58Q9Y2X3 529 aaKnown RBP23.14■■□□□ 1.29
LIMS2-218ENST00000582671 TCP10L2B9ZVM9 353 aa23.13■■□□□ 1.29
LIMS2-218ENST00000582671 LBX1P52954 281 aa23.13■■□□□ 1.29
LIMS2-218ENST00000582671 CACNB3P54284 484 aa23.13■■□□□ 1.29
LIMS2-218ENST00000582671 DIXDC1Q155Q3 683 aa23.13■■□□□ 1.29
LIMS2-218ENST00000582671 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
LIMS2-218ENST00000582671 CDAN1Q8IWY9 1227 aa23.13■■□□□ 1.29
LIMS2-218ENST00000582671 ANGEL1Q9UNK9 670 aaKnown RBP23.13■■□□□ 1.29
LIMS2-218ENST00000582671 LAMB1P07942 1786 aa23.12■■□□□ 1.29
LIMS2-218ENST00000582671 LDLRAD1Q5T700 205 aa23.12■■□□□ 1.29
LIMS2-218ENST00000582671 ARMC9Q7Z3E5 817 aa23.12■■□□□ 1.29
LIMS2-218ENST00000582671 TEPSINQ96N21 525 aa23.12■■□□□ 1.29
LIMS2-218ENST00000582671 AK9Q5TCS8 1911 aa23.12■■□□□ 1.29
LIMS2-218ENST00000582671 PDS5AQ29RF7 1337 aaKnown RBP23.11■■□□□ 1.29
LIMS2-218ENST00000582671 LDHBP07195 334 aaKnown RBP23.11■■□□□ 1.29
LIMS2-218ENST00000582671 OS9Q13438 667 aaPredicted RBP23.11■■□□□ 1.29
LIMS2-218ENST00000582671 TNFAIP1Q13829 316 aa23.11■■□□□ 1.29
LIMS2-218ENST00000582671 TNNI3KQ59H18 835 aa23.11■■□□□ 1.29
LIMS2-218ENST00000582671 BEGAINQ9BUH8 593 aa23.11■■□□□ 1.29
LIMS2-218ENST00000582671 GPR108Q9NPR9 543 aa23.11■■□□□ 1.29
LIMS2-218ENST00000582671 TSKSQ9UJT2 592 aa23.11■■□□□ 1.29
LIMS2-218ENST00000582671 DDX19BQ9UMR2 479 aa23.11■■□□□ 1.29
LIMS2-218ENST00000582671 DAGLAQ9Y4D2 1042 aa23.11■■□□□ 1.29
LIMS2-218ENST00000582671 FPGT-TNNI3KV9GXZ4 949 aa23.11■■□□□ 1.29
LIMS2-218ENST00000582671 CASP8AP2Q9UKL3 1982 aa23.1■■□□□ 1.29
LIMS2-218ENST00000582671 MAP3K11Q16584 847 aa23.1■■□□□ 1.29
LIMS2-218ENST00000582671 SUPT20HL1Q3ZLR7 823 aa23.1■■□□□ 1.29
LIMS2-218ENST00000582671 TMEM39BQ9GZU3 492 aa23.1■■□□□ 1.29
LIMS2-218ENST00000582671 PRDM10Q9NQV6 1147 aa23.1■■□□□ 1.29
LIMS2-218ENST00000582671 ZBTB40Q9NUA8 1239 aa23.1■■□□□ 1.29
LIMS2-218ENST00000582671 HMG20BQ9P0W2 317 aa23.1■■□□□ 1.29
LIMS2-218ENST00000582671 PI16Q6UXB8 463 aa23.09■■□□□ 1.29
LIMS2-218ENST00000582671 CSRNP1Q96S65 589 aa23.09■■□□□ 1.29
LIMS2-218ENST00000582671 USP2O75604 605 aaPredicted RBP23.08■■□□□ 1.29
LIMS2-218ENST00000582671 ARID4AP29374 1257 aaPredicted RBP23.08■■□□□ 1.29
LIMS2-218ENST00000582671 TNNI2P48788 182 aa23.08■■□□□ 1.29
LIMS2-218ENST00000582671 GORABQ5T7V8 394 aa23.08■■□□□ 1.29
LIMS2-218ENST00000582671 DBNDD2Q9BQY9 259 aa23.08■■□□□ 1.29
LIMS2-218ENST00000582671 ABCF2Q9UG63 623 aa23.08■■□□□ 1.29
LIMS2-218ENST00000582671 EXOC6BQ9Y2D4 811 aa23.08■■□□□ 1.29
LIMS2-218ENST00000582671 PPP1R12BO60237 982 aaPredicted RBP23.07■■□□□ 1.28
LIMS2-218ENST00000582671 CDC42EP5Q6NZY7 148 aa23.07■■□□□ 1.28
LIMS2-218ENST00000582671 SIRT2Q8IXJ6 389 aa23.07■■□□□ 1.28
LIMS2-218ENST00000582671 ZGPATQ8N5A5 531 aaKnown RBP23.07■■□□□ 1.28
LIMS2-218ENST00000582671 SPATA5Q8NB90 893 aa23.07■■□□□ 1.28
LIMS2-218ENST00000582671 MCAMP43121 646 aa23.06■■□□□ 1.28
LIMS2-218ENST00000582671 PDE3AQ14432 1141 aa23.06■■□□□ 1.28
LIMS2-218ENST00000582671 TBC1D9Q6ZT07 1266 aa23.06■■□□□ 1.28
LIMS2-218ENST00000582671 CLMNQ96JQ2 1002 aa23.06■■□□□ 1.28
LIMS2-218ENST00000582671 MKRN3Q13064 507 aaKnown RBP23.05■■□□□ 1.28
LIMS2-218ENST00000582671 FKBP1CQ5VVH2 108 aa23.05■■□□□ 1.28
LIMS2-218ENST00000582671 RPAP2Q8IXW5 612 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms