RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 CDK5RAP2Q96SN8 1893 aa11.53□□□□□ -0.56
RFFL-210ENST00000582308 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
RFFL-210ENST00000582308 RNF113AO15541 343 aaKnown RBP11.53□□□□□ -0.56
RFFL-210ENST00000582308 CHMLP26374 656 aa11.53□□□□□ -0.56
RFFL-210ENST00000582308 TICAM2Q86XR7 235 aa11.53□□□□□ -0.56
RFFL-210ENST00000582308 MAGEB6Q8N7X4 407 aa11.53□□□□□ -0.56
RFFL-210ENST00000582308 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.53□□□□□ -0.56
RFFL-210ENST00000582308 TTF2Q9UNY4 1162 aaKnown RBP11.53□□□□□ -0.56
RFFL-210ENST00000582308 GJA3Q9Y6H8 435 aa11.53□□□□□ -0.56
RFFL-210ENST00000582308 RFX7Q2KHR2 1363 aa11.53□□□□□ -0.56
RFFL-210ENST00000582308 ECM29Q5VYK3 1845 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 F8W031 263 aaPredicted RBP11.52□□□□□ -0.57
RFFL-210ENST00000582308 CDC45O75419 566 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 ZFYP08048 801 aaPredicted RBP11.52□□□□□ -0.57
RFFL-210ENST00000582308 CYP7A1P22680 504 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 SCNN1DP51172 638 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 NMIQ13287 307 aaPredicted RBP11.52□□□□□ -0.57
RFFL-210ENST00000582308 UBE3CQ15386 1083 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 DIXDC1Q155Q3 683 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 ZMYM1Q5SVZ6 1142 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 NAA16Q6N069 864 aaPredicted RBP11.52□□□□□ -0.57
RFFL-210ENST00000582308 ZSCAN25Q6NSZ9 544 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 ADGRA1Q86SQ6 560 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 DZIP1Q86YF9 867 aaKnown RBP11.52□□□□□ -0.57
RFFL-210ENST00000582308 KIAA0825Q8IV33 1275 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 AGBL3Q8NEM8 1001 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 FAM227BQ96M60 508 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 MYO3BQ8WXR4 1341 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 ZNF532Q9HCE3 1301 aa11.52□□□□□ -0.57
RFFL-210ENST00000582308 POLR2AP24928 1970 aaKnown RBP11.51□□□□□ -0.57
RFFL-210ENST00000582308 A0A0D9SFI3 127 aa11.51□□□□□ -0.57
RFFL-210ENST00000582308 SHTN1A0MZ66 631 aa11.51□□□□□ -0.57
RFFL-210ENST00000582308 HIP1O00291 1037 aa11.51□□□□□ -0.57
RFFL-210ENST00000582308 IGSF3O75054 1194 aa11.51□□□□□ -0.57
RFFL-210ENST00000582308 DDNO94850 711 aaPredicted RBP11.51□□□□□ -0.57
RFFL-210ENST00000582308 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
RFFL-210ENST00000582308 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
RFFL-210ENST00000582308 LRRFIP1Q32MZ4 808 aaKnown RBP11.51□□□□□ -0.57
RFFL-210ENST00000582308 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
RFFL-210ENST00000582308 GPC2Q8N158 579 aa11.51□□□□□ -0.57
RFFL-210ENST00000582308 OSBP2Q969R2 916 aa11.51□□□□□ -0.57
RFFL-210ENST00000582308 FAM163AQ96GL9 167 aaPredicted RBP11.51□□□□□ -0.57
RFFL-210ENST00000582308 SEC62Q99442 399 aaKnown RBP11.51□□□□□ -0.57
RFFL-210ENST00000582308 DIAPH3Q9NSV4 1193 aa11.51□□□□□ -0.57
RFFL-210ENST00000582308 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
RFFL-210ENST00000582308 M0R2C6 588 aa11.5□□□□□ -0.57
RFFL-210ENST00000582308 USP17L8P0C7I0 530 aa11.5□□□□□ -0.57
RFFL-210ENST00000582308 GSTO1P78417 241 aa11.5□□□□□ -0.57
RFFL-210ENST00000582308 HDLBPQ00341 1268 aaKnown RBP11.5□□□□□ -0.57
RFFL-210ENST00000582308 TMED8Q6PL24 325 aaPredicted RBP11.5□□□□□ -0.57
RFFL-210ENST00000582308 APPBP2Q92624 585 aa11.5□□□□□ -0.57
RFFL-210ENST00000582308 DPF2Q92785 391 aa11.5□□□□□ -0.57
RFFL-210ENST00000582308 MRIQ9BWK5 157 aa11.5□□□□□ -0.57
RFFL-210ENST00000582308 PUS7LQ9H0K6 701 aaKnown RBP11.5□□□□□ -0.57
RFFL-210ENST00000582308 IL25Q9H293 177 aa11.5□□□□□ -0.57
RFFL-210ENST00000582308 DAGLAQ9Y4D2 1042 aa11.5□□□□□ -0.57
RFFL-210ENST00000582308 MAST3O60307 1309 aa11.5□□□□□ -0.57
RFFL-210ENST00000582308 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 BAZ2AQ9UIF9 1905 aaKnown RBP11.49□□□□□ -0.57
RFFL-210ENST00000582308 LDHCP07864 332 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 CRKP46108 304 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 ZNF280AP59817 542 aaPredicted RBP11.49□□□□□ -0.57
RFFL-210ENST00000582308 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 HHIPL2Q6UWX4 724 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 MIGA1Q8NAN2 632 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 TEKT1Q969V4 418 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 ESYT1Q9BSJ8 1104 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 HELLSQ9NRZ9 838 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 CNOT7Q9UIV1 285 aaKnown RBP11.49□□□□□ -0.57
RFFL-210ENST00000582308 SERPINA10Q9UK55 444 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 PCDHAC2Q9Y5I4 1007 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 MROH7-TTC4A0A0A0MT08 1334 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 GAKO14976 1311 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 SCN4AP35499 1836 aa11.49□□□□□ -0.57
RFFL-210ENST00000582308 GPR75-ASB3A0A0A6YYF3 556 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 SGSM2O43147 1006 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 PPP4CP60510 307 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 DYNLL1P63167 89 aaKnown RBP11.48□□□□□ -0.57
RFFL-210ENST00000582308 CFAP100Q494V2 611 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 MCMDC2Q4G0Z9 681 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 APOBEC3HQ6NTF7 200 aaKnown RBP11.48□□□□□ -0.57
RFFL-210ENST00000582308 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 CCDC129Q6ZRS4 1044 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 ZNF589Q86UQ0 364 aaPredicted RBP11.48□□□□□ -0.57
RFFL-210ENST00000582308 SLF2Q8IX21 1173 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 MICALL2Q8IY33 904 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 OGFOD1Q8N543 542 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 ZDHHC15Q96MV8 337 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 GPRC5DQ9NZD1 345 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 HDAC9Q9UKV0 1011 aa11.48□□□□□ -0.57
RFFL-210ENST00000582308 MYH1P12882 1939 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 WDR90Q96KV7 1748 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 MAGEB6P1A0A0J9YX57 407 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 MBD4O95243 580 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 EGFRP00533 1210 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 EPS15P42566 896 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 BTDP43251 543 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 MMP14P50281 582 aa11.47□□□□□ -0.57
RFFL-210ENST00000582308 CASC1Q6TDU7 716 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms