RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 ARHGAP45Q92619 1136 aa12.17□□□□□ -0.46
TOP3A-211ENST00000581536 CLUAP1Q96AJ1 413 aa12.17□□□□□ -0.46
TOP3A-211ENST00000581536 FAM84BQ96KN1 310 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-211ENST00000581536 MEIS3Q99687 375 aa12.17□□□□□ -0.46
TOP3A-211ENST00000581536 RASSF10A6NK89 507 aa12.16□□□□□ -0.46
TOP3A-211ENST00000581536 UBTFL1P0CB47 393 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-211ENST00000581536 TRIM27P14373 513 aa12.16□□□□□ -0.46
TOP3A-211ENST00000581536 IL1R1P14778 569 aa12.16□□□□□ -0.46
TOP3A-211ENST00000581536 PTPN12Q05209 780 aaKnown RBP12.16□□□□□ -0.46
TOP3A-211ENST00000581536 UBE4AQ14139 1066 aa12.16□□□□□ -0.46
TOP3A-211ENST00000581536 METTL24Q5JXM2 366 aa12.16□□□□□ -0.46
TOP3A-211ENST00000581536 ANGEL2Q5VTE6 544 aaKnown RBP12.16□□□□□ -0.46
TOP3A-211ENST00000581536 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
TOP3A-211ENST00000581536 CYP4F22Q6NT55 531 aa12.16□□□□□ -0.46
TOP3A-211ENST00000581536 KRT26Q7Z3Y9 468 aa12.16□□□□□ -0.46
TOP3A-211ENST00000581536 KIAA0825Q8IV33 1275 aa12.16□□□□□ -0.46
TOP3A-211ENST00000581536 DCPSQ96C86 337 aaKnown RBP12.16□□□□□ -0.46
TOP3A-211ENST00000581536 PCDHAC2Q9Y5I4 1007 aa12.16□□□□□ -0.46
TOP3A-211ENST00000581536 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
TOP3A-211ENST00000581536 F8W031 263 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-211ENST00000581536 HSPA1AP0DMV8 641 aaKnown RBP12.15□□□□□ -0.46
TOP3A-211ENST00000581536 HSPA1BP0DMV9 641 aaKnown RBP12.15□□□□□ -0.46
TOP3A-211ENST00000581536 GRM1Q13255 1194 aa12.15□□□□□ -0.46
TOP3A-211ENST00000581536 CAMK2BQ13554 666 aa12.15□□□□□ -0.46
TOP3A-211ENST00000581536 PRAMEF18Q5VWM3 479 aa12.15□□□□□ -0.46
TOP3A-211ENST00000581536 ATG9AQ7Z3C6 839 aa12.15□□□□□ -0.46
TOP3A-211ENST00000581536 VGLL2Q8N8G2 317 aa12.15□□□□□ -0.46
TOP3A-211ENST00000581536 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
TOP3A-211ENST00000581536 FAM163AQ96GL9 167 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-211ENST00000581536 GGA3Q9NZ52 723 aa12.15□□□□□ -0.46
TOP3A-211ENST00000581536 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-211ENST00000581536 PA2G4Q9UQ80 394 aaKnown RBP12.15□□□□□ -0.46
TOP3A-211ENST00000581536 TLL2Q9Y6L7 1015 aa12.15□□□□□ -0.46
TOP3A-211ENST00000581536 MROH5Q6ZUA9 1318 aa12.14□□□□□ -0.47
TOP3A-211ENST00000581536 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
TOP3A-211ENST00000581536 WNT10BO00744 389 aa12.14□□□□□ -0.47
TOP3A-211ENST00000581536 PDE8BO95263 885 aa12.14□□□□□ -0.47
TOP3A-211ENST00000581536 HIBADHP31937 336 aaKnown RBP12.14□□□□□ -0.47
TOP3A-211ENST00000581536 E2F4Q16254 413 aa12.14□□□□□ -0.47
TOP3A-211ENST00000581536 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
TOP3A-211ENST00000581536 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
TOP3A-211ENST00000581536 SAPCD2Q86UD0 394 aa12.14□□□□□ -0.47
TOP3A-211ENST00000581536 TDRD7Q8NHU6 1098 aaKnown RBP12.14□□□□□ -0.47
TOP3A-211ENST00000581536 SIL1Q9H173 461 aa12.14□□□□□ -0.47
TOP3A-211ENST00000581536 ZNF609O15014 1411 aa12.13□□□□□ -0.47
TOP3A-211ENST00000581536 EYA2O00167 538 aa12.13□□□□□ -0.47
TOP3A-211ENST00000581536 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
TOP3A-211ENST00000581536 AOC2O75106 756 aa12.13□□□□□ -0.47
TOP3A-211ENST00000581536 SASH1O94885 1247 aa12.13□□□□□ -0.47
TOP3A-211ENST00000581536 BCAMP50895 628 aa12.13□□□□□ -0.47
TOP3A-211ENST00000581536 GRIK5Q16478 980 aa12.13□□□□□ -0.47
TOP3A-211ENST00000581536 FBXO33Q7Z6M2 555 aa12.13□□□□□ -0.47
TOP3A-211ENST00000581536 OGFOD1Q8N543 542 aa12.13□□□□□ -0.47
TOP3A-211ENST00000581536 TMEM57Q8N5G2 664 aa12.13□□□□□ -0.47
TOP3A-211ENST00000581536 AOX1Q06278 1338 aa12.12□□□□□ -0.47
TOP3A-211ENST00000581536 ZBED9Q6R2W3 1325 aa12.12□□□□□ -0.47
TOP3A-211ENST00000581536 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
TOP3A-211ENST00000581536 TBC1D12O60347 775 aa12.12□□□□□ -0.47
TOP3A-211ENST00000581536 FGFR2P21802 821 aa12.12□□□□□ -0.47
TOP3A-211ENST00000581536 COL13A1Q5TAT6 717 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-211ENST00000581536 MOB2Q70IA6 237 aa12.12□□□□□ -0.47
TOP3A-211ENST00000581536 SULF1Q8IWU6 871 aa12.12□□□□□ -0.47
TOP3A-211ENST00000581536 CDCA5Q96FF9 252 aa12.12□□□□□ -0.47
TOP3A-211ENST00000581536 CAPNS2Q96L46 248 aa12.12□□□□□ -0.47
TOP3A-211ENST00000581536 MYO3BQ8WXR4 1341 aa12.11□□□□□ -0.47
TOP3A-211ENST00000581536 ECM29Q5VYK3 1845 aa12.11□□□□□ -0.47
TOP3A-211ENST00000581536 MYH13Q9UKX3 1938 aa12.11□□□□□ -0.47
TOP3A-211ENST00000581536 FOXN1O15353 648 aa12.11□□□□□ -0.47
TOP3A-211ENST00000581536 ST18O60284 1047 aa12.11□□□□□ -0.47
TOP3A-211ENST00000581536 RLBP1P12271 317 aa12.11□□□□□ -0.47
TOP3A-211ENST00000581536 ZKSCAN2Q63HK3 967 aa12.11□□□□□ -0.47
TOP3A-211ENST00000581536 ZBED3Q96IU2 234 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-211ENST00000581536 PRMT6Q96LA8 375 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-211ENST00000581536 ZIC5Q96T25 663 aa12.11□□□□□ -0.47
TOP3A-211ENST00000581536 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-211ENST00000581536 FAM205AQ6ZU69 1335 aa12.11□□□□□ -0.47
TOP3A-211ENST00000581536 GNAI3P08754 354 aa12.1□□□□□ -0.47
TOP3A-211ENST00000581536 HUNKP57058 714 aa12.1□□□□□ -0.47
TOP3A-211ENST00000581536 FKBP1AP62942 108 aaKnown RBP12.1□□□□□ -0.47
TOP3A-211ENST00000581536 CHAF1AQ13111 956 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-211ENST00000581536 CFAP100Q494V2 611 aa12.1□□□□□ -0.47
TOP3A-211ENST00000581536 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
TOP3A-211ENST00000581536 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
TOP3A-211ENST00000581536 GBA2Q9HCG7 927 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-211ENST00000581536 HDAC9Q9UKV0 1011 aa12.1□□□□□ -0.47
TOP3A-211ENST00000581536 PNMA6EA0A0J9YXQ4 647 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 SRGAP3O43295 1099 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 TIMM10P62072 90 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 DLGAP5Q15398 846 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 CAVIN4Q5BKX8 364 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 MFSD14BQ5SR56 506 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 VPS37DQ86XT2 251 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 C2orf69Q8N8R5 385 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 COPRSQ9NQ92 184 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 FZD1Q9UP38 647 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 PCDHGA4Q9Y5G9 962 aa12.09□□□□□ -0.47
TOP3A-211ENST00000581536 CLRN2A0PK11 232 aa12.08□□□□□ -0.48
TOP3A-211ENST00000581536 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
TOP3A-211ENST00000581536 FRAT2O75474 233 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms