RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SERPINA10Q9UK55 444 aa18.87■□□□□ 0.61
SS18-216ENST00000580751 CYP2E1P05181 493 aaPredicted RBP18.86■□□□□ 0.61
SS18-216ENST00000580751 GRIK5Q16478 980 aa18.86■□□□□ 0.61
SS18-216ENST00000580751 EAPPQ56P03 285 aaPredicted RBP18.86■□□□□ 0.61
SS18-216ENST00000580751 DZIP1Q86YF9 867 aaKnown RBP18.86■□□□□ 0.61
SS18-216ENST00000580751 TRPM4Q8TD43 1214 aa18.86■□□□□ 0.61
SS18-216ENST00000580751 TEKT1Q969V4 418 aa18.86■□□□□ 0.61
SS18-216ENST00000580751 DNAJC2Q99543 621 aaKnown RBP18.86■□□□□ 0.61
SS18-216ENST00000580751 HAUS7Q99871 368 aa18.86■□□□□ 0.61
SS18-216ENST00000580751 LRP2BPQ9P2M1 347 aa18.86■□□□□ 0.61
SS18-216ENST00000580751 GLRX3O76003 335 aaKnown RBP18.85■□□□□ 0.61
SS18-216ENST00000580751 DLGAP5Q15398 846 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 RBM26Q5T8P6 1007 aaKnown RBP18.85■□□□□ 0.61
SS18-216ENST00000580751 TBC1D9Q6ZT07 1266 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 LDHDQ86WU2 507 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 SLF2Q8IX21 1173 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 MTMR14Q8NCE2 650 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 MRIQ9BWK5 157 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 BOLA2Q9H3K6 86 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 STAP2Q9UGK3 403 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 MAST2Q6P0Q8 1798 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 ADAMTSL1Q8N6G6 1762 aa18.85■□□□□ 0.61
SS18-216ENST00000580751 AOX1Q06278 1338 aa18.84■□□□□ 0.61
SS18-216ENST00000580751 EGFRP00533 1210 aa18.84■□□□□ 0.61
SS18-216ENST00000580751 CRKP46108 304 aa18.84■□□□□ 0.61
SS18-216ENST00000580751 RBM5P52756 815 aaKnown RBP eCLIP18.84■□□□□ 0.61
SS18-216ENST00000580751 CFAP100Q494V2 611 aa18.84■□□□□ 0.61
SS18-216ENST00000580751 TSHZ3Q63HK5 1081 aa18.84■□□□□ 0.61
SS18-216ENST00000580751 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
SS18-216ENST00000580751 PAG1Q9NWQ8 432 aa18.84■□□□□ 0.61
SS18-216ENST00000580751 RAI14Q9P0K7 980 aa18.84■□□□□ 0.61
SS18-216ENST00000580751 NDUFB9Q9Y6M9 179 aa18.84■□□□□ 0.61
SS18-216ENST00000580751 GOLIM4O00461 696 aa18.83■□□□□ 0.6
SS18-216ENST00000580751 TOMM70O94826 608 aa18.83■□□□□ 0.6
SS18-216ENST00000580751 PDE1AP54750 535 aa18.83■□□□□ 0.6
SS18-216ENST00000580751 GSTO1P78417 241 aa18.83■□□□□ 0.6
SS18-216ENST00000580751 TMED8Q6PL24 325 aaPredicted RBP18.83■□□□□ 0.6
SS18-216ENST00000580751 HHIPL2Q6UWX4 724 aa18.83■□□□□ 0.6
SS18-216ENST00000580751 PI4K2BQ8TCG2 481 aa18.83■□□□□ 0.6
SS18-216ENST00000580751 PIH1D3Q9NQM4 214 aaKnown RBP18.83■□□□□ 0.6
SS18-216ENST00000580751 DOCK2Q92608 1830 aa18.83■□□□□ 0.6
SS18-216ENST00000580751 SPDYE2BA6NHP3 402 aa18.82■□□□□ 0.6
SS18-216ENST00000580751 MYO1BO43795 1136 aa18.82■□□□□ 0.6
SS18-216ENST00000580751 SPDYE6P0CI01 402 aa18.82■□□□□ 0.6
SS18-216ENST00000580751 HIRAP54198 1017 aaPredicted RBP18.82■□□□□ 0.6
SS18-216ENST00000580751 MECOMQ03112 1051 aa18.82■□□□□ 0.6
SS18-216ENST00000580751 MAP3K12Q12852 859 aa18.82■□□□□ 0.6
SS18-216ENST00000580751 ZBED3Q96IU2 234 aaPredicted RBP18.82■□□□□ 0.6
SS18-216ENST00000580751 ZDHHC15Q96MV8 337 aa18.82■□□□□ 0.6
SS18-216ENST00000580751 OSBPL3Q9H4L5 887 aa18.82■□□□□ 0.6
SS18-216ENST00000580751 ANTXR1Q9H6X2 564 aa18.82■□□□□ 0.6
SS18-216ENST00000580751 CLEC11AQ9Y240 323 aa18.82■□□□□ 0.6
SS18-216ENST00000580751 WNT10BO00744 389 aa18.81■□□□□ 0.6
SS18-216ENST00000580751 IDH1O75874 414 aaKnown RBP18.81■□□□□ 0.6
SS18-216ENST00000580751 DIXDC1Q155Q3 683 aa18.81■□□□□ 0.6
SS18-216ENST00000580751 RBM46Q8TBY0 533 aaKnown RBP18.81■□□□□ 0.6
SS18-216ENST00000580751 NSUN4Q96CB9 384 aaKnown RBP18.81■□□□□ 0.6
SS18-216ENST00000580751 GAKO14976 1311 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 LDHCP07864 332 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 POTEIP0CG38 1075 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 POTEJP0CG39 1038 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 PDE4AP27815 886 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 NBPF9Q3BBW0 867 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 NAA16Q6N069 864 aaPredicted RBP18.8■□□□□ 0.6
SS18-216ENST00000580751 CHADLQ6NUI6 762 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 PLEKHM2Q8IWE5 1019 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 SMC1BQ8NDV3 1235 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.8■□□□□ 0.6
SS18-216ENST00000580751 PGAP2Q9UHJ9 254 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 DAGLAQ9Y4D2 1042 aa18.8■□□□□ 0.6
SS18-216ENST00000580751 ECM29Q5VYK3 1845 aa18.79■□□□□ 0.6
SS18-216ENST00000580751 MROH7-TTC4A0A0A0MT08 1334 aa18.79■□□□□ 0.6
SS18-216ENST00000580751 PITPNM2Q9BZ72 1349 aa18.79■□□□□ 0.6
SS18-216ENST00000580751 MYH2Q9UKX2 1941 aa18.79■□□□□ 0.6
SS18-216ENST00000580751 EDC3Q96F86 508 aaKnown RBP18.79■□□□□ 0.6
SS18-216ENST00000580751 FAM163AQ96GL9 167 aaPredicted RBP18.79■□□□□ 0.6
SS18-216ENST00000580751 PRMT6Q96LA8 375 aaPredicted RBP18.79■□□□□ 0.6
SS18-216ENST00000580751 GGA3Q9NZ52 723 aa18.79■□□□□ 0.6
SS18-216ENST00000580751 MYO5AQ9Y4I1 1855 aaKnown RBP18.78■□□□□ 0.6
SS18-216ENST00000580751 ANGEL2Q5VTE6 544 aaKnown RBP18.78■□□□□ 0.6
SS18-216ENST00000580751 ZNF384Q8TF68 577 aa18.78■□□□□ 0.6
SS18-216ENST00000580751 DCPSQ96C86 337 aaKnown RBP18.78■□□□□ 0.6
SS18-216ENST00000580751 PCDHAC2Q9Y5I4 1007 aa18.78■□□□□ 0.6
SS18-216ENST00000580751 RGS3P49796 1198 aa18.77■□□□□ 0.6
SS18-216ENST00000580751 LRRFIP1Q32MZ4 808 aaKnown RBP18.77■□□□□ 0.6
SS18-216ENST00000580751 ZSCAN25Q6NSZ9 544 aa18.77■□□□□ 0.6
SS18-216ENST00000580751 APOBEC3HQ6NTF7 200 aaKnown RBP18.77■□□□□ 0.6
SS18-216ENST00000580751 MAGEB6Q8N7X4 407 aa18.77■□□□□ 0.6
SS18-216ENST00000580751 KBTBD3Q8NAB2 608 aa18.77■□□□□ 0.6
SS18-216ENST00000580751 NOL10Q9BSC4 688 aaKnown RBP18.77■□□□□ 0.6
SS18-216ENST00000580751 ASTN2O75129 1339 aaPredicted RBP18.76■□□□□ 0.59
SS18-216ENST00000580751 FSTL1Q12841 308 aa18.76■□□□□ 0.59
SS18-216ENST00000580751 SPDYE2Q495Y8 402 aa18.76■□□□□ 0.59
SS18-216ENST00000580751 SLC9C2Q5TAH2 1124 aa18.76■□□□□ 0.59
SS18-216ENST00000580751 MAP1SQ66K74 1059 aaPredicted RBP18.76■□□□□ 0.59
SS18-216ENST00000580751 APOBEC3FQ8IUX4 373 aaKnown RBP18.76■□□□□ 0.59
SS18-216ENST00000580751 SULF1Q8IWU6 871 aa18.76■□□□□ 0.59
SS18-216ENST00000580751 TMOD2Q9NZR1 351 aa18.76■□□□□ 0.59
SS18-216ENST00000580751 GPR75-ASB3A0A0A6YYF3 556 aa18.75■□□□□ 0.59
SS18-216ENST00000580751 BAG3O95817 575 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms