RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 NSUN4Q96CB9 384 aaKnown RBP19.26■□□□□ 0.67
CSNK1D-212ENST00000580061 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.26■□□□□ 0.675e-10■□□□□ 9.7
CSNK1D-212ENST00000580061 TTF2Q9UNY4 1162 aaKnown RBP19.26■□□□□ 0.67
CSNK1D-212ENST00000580061 RFX7Q2KHR2 1363 aa19.26■□□□□ 0.67
CSNK1D-212ENST00000580061 ADAMTSL1Q8N6G6 1762 aa19.26■□□□□ 0.67
CSNK1D-212ENST00000580061 F8W031 263 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-212ENST00000580061 DDNO94850 711 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-212ENST00000580061 GMPSP49915 693 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-212ENST00000580061 MECOMQ03112 1051 aa19.25■□□□□ 0.67
CSNK1D-212ENST00000580061 DPY19L2Q6NUT2 758 aa19.25■□□□□ 0.67
CSNK1D-212ENST00000580061 TICAM2Q86XR7 235 aa19.25■□□□□ 0.67
CSNK1D-212ENST00000580061 DZIP1Q86YF9 867 aaKnown RBP19.25■□□□□ 0.67
CSNK1D-212ENST00000580061 DPF2Q92785 391 aa19.25■□□□□ 0.67
CSNK1D-212ENST00000580061 MAST3O60307 1309 aa19.25■□□□□ 0.67
CSNK1D-212ENST00000580061 ADD2P35612 726 aa19.24■□□□□ 0.67
CSNK1D-212ENST00000580061 SLC9C2Q5TAH2 1124 aa19.24■□□□□ 0.67
CSNK1D-212ENST00000580061 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
CSNK1D-212ENST00000580061 MAGEB6Q8N7X4 407 aa19.24■□□□□ 0.67
CSNK1D-212ENST00000580061 GLTPD2A6NH11 291 aa19.23■□□□□ 0.67
CSNK1D-212ENST00000580061 CHGBP05060 677 aa19.23■□□□□ 0.67
CSNK1D-212ENST00000580061 USP17L8P0C7I0 530 aa19.23■□□□□ 0.67
CSNK1D-212ENST00000580061 PDE6AP16499 860 aa19.23■□□□□ 0.67
CSNK1D-212ENST00000580061 LRRFIP1Q32MZ4 808 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-212ENST00000580061 NAA16Q6N069 864 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-212ENST00000580061 TMED8Q6PL24 325 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-212ENST00000580061 TCRBV5S4A2TA0A5A2 114 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 RNF113AO15541 343 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 ZFYP08048 801 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 SCNN1DP51172 638 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 GSTO1P78417 241 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 HDLBPQ00341 1268 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 UBE3CQ15386 1083 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 DIXDC1Q155Q3 683 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 MRIQ9BWK5 157 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 HDAC9Q9UKV0 1011 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 SCN4AP35499 1836 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 WDR90Q96KV7 1748 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 ZNF532Q9HCE3 1301 aa19.22■□□□□ 0.67
CSNK1D-212ENST00000580061 CYP7A1P22680 504 aa19.21■□□□□ 0.67
CSNK1D-212ENST00000580061 MMP14P50281 582 aa19.21■□□□□ 0.67
CSNK1D-212ENST00000580061 SLFNL1Q499Z3 407 aa19.21■□□□□ 0.67
CSNK1D-212ENST00000580061 SLF2Q8IX21 1173 aa19.21■□□□□ 0.67
CSNK1D-212ENST00000580061 OGFOD1Q8N543 542 aa19.21■□□□□ 0.67
CSNK1D-212ENST00000580061 FAM163AQ96GL9 167 aaPredicted RBP19.21■□□□□ 0.67
CSNK1D-212ENST00000580061 GPRC5DQ9NZD1 345 aa19.21■□□□□ 0.67
CSNK1D-212ENST00000580061 CNOT7Q9UIV1 285 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-212ENST00000580061 SERPINA10Q9UK55 444 aa19.21■□□□□ 0.67
CSNK1D-212ENST00000580061 SHTN1A0MZ66 631 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 HIP1O00291 1037 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 LDHCP07864 332 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 CRKP46108 304 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 ZNF280AP59817 542 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 HHIPL2Q6UWX4 724 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 ADGRA1Q86SQ6 560 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 MICALL2Q8IY33 904 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 TEKT1Q969V4 418 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 L3MBTL3Q96JM7 780 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 ECM29Q5VYK3 1845 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 MROH7-TTC4A0A0A0MT08 1334 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 GAKO14976 1311 aa19.2■□□□□ 0.66
CSNK1D-212ENST00000580061 CHMLP26374 656 aa19.19■□□□□ 0.66
CSNK1D-212ENST00000580061 ZMYM1Q5SVZ6 1142 aa19.19■□□□□ 0.66
CSNK1D-212ENST00000580061 APPBP2Q92624 585 aa19.19■□□□□ 0.66
CSNK1D-212ENST00000580061 CFAP100Q494V2 611 aa19.18■□□□□ 0.66
CSNK1D-212ENST00000580061 MTMR14Q8NCE2 650 aa19.18■□□□□ 0.66
CSNK1D-212ENST00000580061 ZDHHC15Q96MV8 337 aa19.18■□□□□ 0.66
CSNK1D-212ENST00000580061 MYOZ2Q9NPC6 264 aa19.18■□□□□ 0.66
CSNK1D-212ENST00000580061 DIAPH3Q9NSV4 1193 aa19.18■□□□□ 0.66
CSNK1D-212ENST00000580061 DAGLAQ9Y4D2 1042 aa19.18■□□□□ 0.66
CSNK1D-212ENST00000580061 CDK5RAP2Q96SN8 1893 aa19.18■□□□□ 0.66
CSNK1D-212ENST00000580061 GPR75-ASB3A0A0A6YYF3 556 aa19.17■□□□□ 0.66
CSNK1D-212ENST00000580061 H7C1D1 291 aa19.17■□□□□ 0.66
CSNK1D-212ENST00000580061 CDC45O75419 566 aa19.17■□□□□ 0.66
CSNK1D-212ENST00000580061 LMOD1P29536 600 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-212ENST00000580061 NMIQ13287 307 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-212ENST00000580061 OSBP2Q969R2 916 aa19.17■□□□□ 0.66
CSNK1D-212ENST00000580061 FAM227BQ96M60 508 aa19.17■□□□□ 0.66
CSNK1D-212ENST00000580061 PCDHAC2Q9Y5I4 1007 aa19.17■□□□□ 0.66
CSNK1D-212ENST00000580061 A0A0D9SFI3 127 aa19.16■□□□□ 0.66
CSNK1D-212ENST00000580061 EPS15P42566 896 aa19.16■□□□□ 0.66
CSNK1D-212ENST00000580061 RBM5P52756 815 aaKnown RBP eCLIP19.16■□□□□ 0.66
CSNK1D-212ENST00000580061 CWC27Q6UX04 472 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-212ENST00000580061 MIGA1Q8NAN2 632 aa19.16■□□□□ 0.66
CSNK1D-212ENST00000580061 SEC62Q99442 399 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-212ENST00000580061 PUS7LQ9H0K6 701 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-212ENST00000580061 HELLSQ9NRZ9 838 aa19.16■□□□□ 0.66
CSNK1D-212ENST00000580061 M0R2C6 588 aa19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 BTDP43251 543 aa19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 PPP4CP60510 307 aa19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 DLGAP5Q15398 846 aa19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 APOBEC3HQ6NTF7 200 aaKnown RBP19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 SAMD7Q7Z3H4 446 aa19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 ZBED3Q96IU2 234 aaPredicted RBP19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 PRMT6Q96LA8 375 aaPredicted RBP19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 RIOK1Q9BRS2 568 aaKnown RBP19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 AATFQ9NY61 560 aaKnown RBP eCLIP19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 FOCADQ5VW36 1801 aa19.15■□□□□ 0.66
CSNK1D-212ENST00000580061 MAGEB6P1A0A0J9YX57 407 aa19.14■□□□□ 0.65
CSNK1D-212ENST00000580061 SPDYE2BA6NHP3 402 aa19.14■□□□□ 0.65
CSNK1D-212ENST00000580061 POTECB2RU33 542 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms