RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-209ENST00000578904 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
CSNK1D-209ENST00000578904 RAD50Q92878 1312 aa16.78■□□□□ 0.28
CSNK1D-209ENST00000578904 SALL1Q9NSC2 1324 aa16.78■□□□□ 0.28
CSNK1D-209ENST00000578904 EPB41L2O43491 1005 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-209ENST00000578904 RPS12P25398 132 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-209ENST00000578904 GMPSP49915 693 aaPredicted RBP16.78■□□□□ 0.28
CSNK1D-209ENST00000578904 MAP3K12Q12852 859 aa16.78■□□□□ 0.28
CSNK1D-209ENST00000578904 CERS5Q8N5B7 392 aa16.78■□□□□ 0.28
CSNK1D-209ENST00000578904 NDUFB9Q9Y6M9 179 aa16.78■□□□□ 0.28
CSNK1D-209ENST00000578904 AGBL3Q8NEM8 1001 aa16.77■□□□□ 0.28
CSNK1D-209ENST00000578904 ESYT1Q9BSJ8 1104 aa16.77■□□□□ 0.28
CSNK1D-209ENST00000578904 GPBP1L1Q9HC44 474 aaPredicted RBP16.77■□□□□ 0.28
CSNK1D-209ENST00000578904 ABCF2Q9UG63 623 aa16.77■□□□□ 0.28
CSNK1D-209ENST00000578904 DOCK2Q92608 1830 aa16.77■□□□□ 0.27
CSNK1D-209ENST00000578904 F8W031 263 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-209ENST00000578904 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-209ENST00000578904 SPTY2D1Q68D10 685 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-209ENST00000578904 KIAA0825Q8IV33 1275 aa16.76■□□□□ 0.27
CSNK1D-209ENST00000578904 ZNF526Q8TF50 670 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-209ENST00000578904 L3MBTL3Q96JM7 780 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-209ENST00000578904 RNF113AO15541 343 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 CYP2E1P05181 493 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 LDHBP07195 334 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 MCCP23508 829 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 PRDX5P30044 214 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 SCNN1DP51172 638 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 CWC27Q6UX04 472 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 DPF2Q92785 391 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 GMLQ99445 158 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 HELLSQ9NRZ9 838 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 LRP2BPQ9P2M1 347 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 SUGT1Q9Y2Z0 365 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 WDR90Q96KV7 1748 aa16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 MYO5AQ9Y4I1 1855 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-209ENST00000578904 MAST3O60307 1309 aa16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 USP17L8P0C7I0 530 aa16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 GRIK5Q16478 980 aa16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 ERICH6Q7L0X2 663 aa16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 DZIP1Q86YF9 867 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 MICALL2Q8IY33 904 aa16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 PIH1D3Q9NQM4 214 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 GPRC5DQ9NZD1 345 aa16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 HDAC9Q9UKV0 1011 aa16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 TTF2Q9UNY4 1162 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 MAST2Q6P0Q8 1798 aa16.74■□□□□ 0.27
CSNK1D-209ENST00000578904 IQCA1LA6NCM1 817 aa16.73■□□□□ 0.27
CSNK1D-209ENST00000578904 SGSM2O43147 1006 aa16.73■□□□□ 0.27
CSNK1D-209ENST00000578904 IDH1O75874 414 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-209ENST00000578904 MCMDC2Q4G0Z9 681 aa16.73■□□□□ 0.27
CSNK1D-209ENST00000578904 OGFOD1Q8N543 542 aa16.73■□□□□ 0.27
CSNK1D-209ENST00000578904 ANTXR1Q9H6X2 564 aa16.73■□□□□ 0.27
CSNK1D-209ENST00000578904 RAI14Q9P0K7 980 aa16.73■□□□□ 0.27
CSNK1D-209ENST00000578904 CNOT7Q9UIV1 285 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-209ENST00000578904 SHTN1A0MZ66 631 aa16.72■□□□□ 0.27
CSNK1D-209ENST00000578904 H7C1D1 291 aa16.72■□□□□ 0.27
CSNK1D-209ENST00000578904 NMIQ13287 307 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-209ENST00000578904 UBE3CQ15386 1083 aa16.72■□□□□ 0.27
CSNK1D-209ENST00000578904 APPBP2Q92624 585 aa16.72■□□□□ 0.27
CSNK1D-209ENST00000578904 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
CSNK1D-209ENST00000578904 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
CSNK1D-209ENST00000578904 HACL1Q9UJ83 578 aa16.72■□□□□ 0.27
CSNK1D-209ENST00000578904 SCN4AP35499 1836 aa16.71■□□□□ 0.27
CSNK1D-209ENST00000578904 EPS15P42566 896 aa16.71■□□□□ 0.27
CSNK1D-209ENST00000578904 SLC9C2Q5TAH2 1124 aa16.71■□□□□ 0.27
CSNK1D-209ENST00000578904 SEC24BO95487 1268 aa16.7■□□□□ 0.26
CSNK1D-209ENST00000578904 MMP14P50281 582 aa16.7■□□□□ 0.26
CSNK1D-209ENST00000578904 ZNF280AP59817 542 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-209ENST00000578904 ZMYM1Q5SVZ6 1142 aa16.7■□□□□ 0.26
CSNK1D-209ENST00000578904 SLF2Q8IX21 1173 aa16.7■□□□□ 0.26
CSNK1D-209ENST00000578904 TEKT1Q969V4 418 aa16.7■□□□□ 0.26
CSNK1D-209ENST00000578904 RRAGCQ9HB90 399 aa16.7■□□□□ 0.26
CSNK1D-209ENST00000578904 MYOZ2Q9NPC6 264 aa16.7■□□□□ 0.26
CSNK1D-209ENST00000578904 ADARB2Q9NS39 739 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-209ENST00000578904 EPHX2P34913 555 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 ADD2P35612 726 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 ANP32AP39687 249 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 CRKP46108 304 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 RBM5P52756 815 aaKnown RBP eCLIP16.69■□□□□ 0.261e-8■■□□□ 12.4
CSNK1D-209ENST00000578904 GSTO1P78417 241 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 MECOMQ03112 1051 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 DIXDC1Q155Q3 683 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 KIF4BQ2VIQ3 1234 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 CFAP100Q494V2 611 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 TBC1D10BQ4KMP7 808 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 RBM26Q5T8P6 1007 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 NMRK2Q9NPI5 230 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 SERPINA10Q9UK55 444 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 ADAMTSL1Q8N6G6 1762 aa16.69■□□□□ 0.26
CSNK1D-209ENST00000578904 LDHCP07864 332 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 VEGFAP15692 232 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 PDE6AP16499 860 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 DLGAP5Q15398 846 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 NAA16Q6N069 864 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 SAMD7Q7Z3H4 446 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 MAGEB6Q8N7X4 407 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms