RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 RPAP1Q9BWH6 1393 aaPredicted RBP10.77□□□□□ -0.69
SMG6-216ENST00000575176 MCAMP43121 646 aa10.76□□□□□ -0.69
SMG6-216ENST00000575176 CRKP46108 304 aa10.76□□□□□ -0.69
SMG6-216ENST00000575176 CHAF1AQ13111 956 aaPredicted RBP10.76□□□□□ -0.69
SMG6-216ENST00000575176 TNNI3KQ59H18 835 aa10.76□□□□□ -0.69
SMG6-216ENST00000575176 CAVIN4Q5BKX8 364 aa10.76□□□□□ -0.69
SMG6-216ENST00000575176 APOBEC3HQ6NTF7 200 aaKnown RBP10.76□□□□□ -0.69
SMG6-216ENST00000575176 EAF2Q96CJ1 260 aaPredicted RBP10.76□□□□□ -0.69
SMG6-216ENST00000575176 HHIPL1Q96JK4 782 aa10.76□□□□□ -0.69
SMG6-216ENST00000575176 DBNDD2Q9BQY9 259 aa10.76□□□□□ -0.69
SMG6-216ENST00000575176 TTF2Q9UNY4 1162 aaKnown RBP10.76□□□□□ -0.69
SMG6-216ENST00000575176 EXOC6BQ9Y2D4 811 aa10.76□□□□□ -0.69
SMG6-216ENST00000575176 FPGT-TNNI3KV9GXZ4 949 aa10.76□□□□□ -0.69
SMG6-216ENST00000575176 GAKO14976 1311 aa10.76□□□□□ -0.69
SMG6-216ENST00000575176 SEMA3EO15041 775 aa10.75□□□□□ -0.69
SMG6-216ENST00000575176 HDLBPQ00341 1268 aaKnown RBP10.75□□□□□ -0.69
SMG6-216ENST00000575176 PRAMEF18Q5VWM3 479 aa10.75□□□□□ -0.69
SMG6-216ENST00000575176 TBC1D22AQ8WUA7 517 aa10.75□□□□□ -0.69
SMG6-216ENST00000575176 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
SMG6-216ENST00000575176 ZDHHC15Q96MV8 337 aa10.75□□□□□ -0.69
SMG6-216ENST00000575176 ZIC5Q96T25 663 aa10.75□□□□□ -0.69
SMG6-216ENST00000575176 HMG20BQ9P0W2 317 aa10.75□□□□□ -0.69
SMG6-216ENST00000575176 SUGT1Q9Y2Z0 365 aa10.75□□□□□ -0.69
SMG6-216ENST00000575176 DAGLAQ9Y4D2 1042 aa10.75□□□□□ -0.69
SMG6-216ENST00000575176 CLRN2A0PK11 232 aa10.74□□□□□ -0.69
SMG6-216ENST00000575176 DIXDC1Q155Q3 683 aa10.74□□□□□ -0.69
SMG6-216ENST00000575176 CYP4F22Q6NT55 531 aa10.74□□□□□ -0.69
SMG6-216ENST00000575176 MOB2Q70IA6 237 aa10.74□□□□□ -0.69
SMG6-216ENST00000575176 SULF1Q8IWU6 871 aa10.74□□□□□ -0.69
SMG6-216ENST00000575176 OGFOD1Q8N543 542 aa10.74□□□□□ -0.69
SMG6-216ENST00000575176 DCPSQ96C86 337 aaKnown RBP10.74□□□□□ -0.69
SMG6-216ENST00000575176 MRIQ9BWK5 157 aa10.74□□□□□ -0.69
SMG6-216ENST00000575176 GBA2Q9HCG7 927 aaPredicted RBP10.74□□□□□ -0.69
SMG6-216ENST00000575176 FZD1Q9UP38 647 aa10.74□□□□□ -0.69
SMG6-216ENST00000575176 MYH1P12882 1939 aa10.74□□□□□ -0.69
SMG6-216ENST00000575176 SURF6O75683 361 aaKnown RBP10.73□□□□□ -0.69
SMG6-216ENST00000575176 MS4A1P11836 297 aa10.73□□□□□ -0.69
SMG6-216ENST00000575176 DLGAP5Q15398 846 aa10.73□□□□□ -0.69
SMG6-216ENST00000575176 HHIPL2Q6UWX4 724 aa10.73□□□□□ -0.69
SMG6-216ENST00000575176 APOBEC3FQ8IUX4 373 aaKnown RBP10.73□□□□□ -0.69
SMG6-216ENST00000575176 RPAP2Q8IXW5 612 aaPredicted RBP10.73□□□□□ -0.69
SMG6-216ENST00000575176 WDR66Q8TBY9 1149 aa10.73□□□□□ -0.69
SMG6-216ENST00000575176 ZNF512BQ96KM6 892 aaPredicted RBP10.73□□□□□ -0.69
SMG6-216ENST00000575176 CAPNS2Q96L46 248 aa10.73□□□□□ -0.69
SMG6-216ENST00000575176 ZNF70Q9UC06 446 aaPredicted RBP10.73□□□□□ -0.69
SMG6-216ENST00000575176 HDAC9Q9UKV0 1011 aa10.73□□□□□ -0.69
SMG6-216ENST00000575176 DENND2AQ9ULE3 1009 aa10.73□□□□□ -0.69
SMG6-216ENST00000575176 AKAP2Q9Y2D5 859 aa10.73□□□□□ -0.69
SMG6-216ENST00000575176 WDR33Q9C0J8 1336 aaKnown RBP10.73□□□□□ -0.69
SMG6-216ENST00000575176 COL2A1P02458 1487 aaPredicted RBP10.73□□□□□ -0.69
SMG6-216ENST00000575176 LOC285556D6RIA3 1793 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 CENPFP49454 3210 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 AOC2O75106 756 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 CACNB3P54284 484 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 DEFB115Q30KQ5 88 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 VPS37DQ86XT2 251 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 RASAL3Q86YV0 1011 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 DEFB129Q9H1M3 183 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 TDRD3Q9H7E2 651 aaKnown RBP10.72□□□□□ -0.69
SMG6-216ENST00000575176 ZNF408Q9H9D4 720 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 PCDHB15Q9Y5E8 787 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 AK9Q5TCS8 1911 aa10.72□□□□□ -0.69
SMG6-216ENST00000575176 BRCA2P51587 3418 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 ZSWIM8A7E2V4 1837 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 MAST3O60307 1309 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 CYP2E1P05181 493 aaPredicted RBP10.71□□□□□ -0.69
SMG6-216ENST00000575176 SLC10A3P09131 477 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 HUNKP57058 714 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 RHBDL3P58872 404 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 NFIAQ12857 509 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 G3BP1Q13283 466 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMG6-216ENST00000575176 LDLRAD1Q5T700 205 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 SPATA5Q8NB90 893 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 RHPN1Q8TCX5 695 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 TEKT1Q969V4 418 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 ABT1Q9ULW3 272 aaKnown RBP10.71□□□□□ -0.69
SMG6-216ENST00000575176 PPP2R3BQ9Y5P8 575 aa10.71□□□□□ -0.69
SMG6-216ENST00000575176 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
SMG6-216ENST00000575176 MROH7-TTC4A0A0A0MT08 1334 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 SALL3Q9BXA9 1300 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 HSPA1AP0DMV8 641 aaKnown RBP10.7□□□□□ -0.7
SMG6-216ENST00000575176 HSPA1BP0DMV9 641 aaKnown RBP10.7□□□□□ -0.7
SMG6-216ENST00000575176 FKBP1BP68106 108 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 RASA3Q14644 834 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 NBPF12Q5TAG4 269 aaPredicted RBP10.7□□□□□ -0.7
SMG6-216ENST00000575176 FKBP1CQ5VVH2 108 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 TBC1D9Q6ZT07 1266 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 NSUN4Q96CB9 384 aaKnown RBP10.7□□□□□ -0.7
SMG6-216ENST00000575176 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
SMG6-216ENST00000575176 CRBNQ96SW2 442 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 TMEM39BQ9GZU3 492 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 CCDC8Q9H0W5 538 aaPredicted RBP10.7□□□□□ -0.7
SMG6-216ENST00000575176 PIH1D3Q9NQM4 214 aaKnown RBP10.7□□□□□ -0.7
SMG6-216ENST00000575176 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 NDUFB9Q9Y6M9 179 aa10.7□□□□□ -0.7
SMG6-216ENST00000575176 CASP8AP2Q9UKL3 1982 aa10.69□□□□□ -0.7
SMG6-216ENST00000575176 MYH8P13535 1937 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms