RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 TNFAIP1Q13829 316 aa13.13□□□□□ -0.31
LITAF-216ENST00000574848 GRIK5Q16478 980 aa13.13□□□□□ -0.31
LITAF-216ENST00000574848 ATP2B3Q16720 1220 aa13.13□□□□□ -0.31
LITAF-216ENST00000574848 LDLRAD1Q5T700 205 aa13.13□□□□□ -0.31
LITAF-216ENST00000574848 ZKSCAN2Q63HK3 967 aa13.13□□□□□ -0.31
LITAF-216ENST00000574848 MOB2Q70IA6 237 aa13.13□□□□□ -0.31
LITAF-216ENST00000574848 MRIQ9BWK5 157 aa13.13□□□□□ -0.31
LITAF-216ENST00000574848 SIL1Q9H173 461 aa13.13□□□□□ -0.31
LITAF-216ENST00000574848 IQSEC3Q9UPP2 1182 aaPredicted RBP13.13□□□□□ -0.31
LITAF-216ENST00000574848 PA2G4Q9UQ80 394 aaKnown RBP13.13□□□□□ -0.31
LITAF-216ENST00000574848 MAST3O60307 1309 aa13.13□□□□□ -0.31
LITAF-216ENST00000574848 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
LITAF-216ENST00000574848 UNCXA6NJT0 531 aa13.12□□□□□ -0.31
LITAF-216ENST00000574848 SEMA3EO15041 775 aa13.12□□□□□ -0.31
LITAF-216ENST00000574848 MS4A1P11836 297 aa13.12□□□□□ -0.31
LITAF-216ENST00000574848 CRKP46108 304 aa13.12□□□□□ -0.31
LITAF-216ENST00000574848 ARMC9Q7Z3E5 817 aa13.12□□□□□ -0.31
LITAF-216ENST00000574848 DZIP1LQ8IYY4 767 aaKnown RBP13.12□□□□□ -0.31
LITAF-216ENST00000574848 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
LITAF-216ENST00000574848 CEP126Q9P2H0 1117 aa13.12□□□□□ -0.31
LITAF-216ENST00000574848 ZNF70Q9UC06 446 aaPredicted RBP13.12□□□□□ -0.31
LITAF-216ENST00000574848 PDS5AQ29RF7 1337 aaKnown RBP13.12□□□□□ -0.31
LITAF-216ENST00000574848 SALL1Q9NSC2 1324 aa13.12□□□□□ -0.31
LITAF-216ENST00000574848 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
LITAF-216ENST00000574848 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
LITAF-216ENST00000574848 SRGAP3O43295 1099 aa13.11□□□□□ -0.31
LITAF-216ENST00000574848 FRAT2O75474 233 aaPredicted RBP13.11□□□□□ -0.31
LITAF-216ENST00000574848 GNAI2P04899 355 aa13.11□□□□□ -0.31
LITAF-216ENST00000574848 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.31
LITAF-216ENST00000574848 CHAF1AQ13111 956 aaPredicted RBP13.11□□□□□ -0.31
LITAF-216ENST00000574848 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
LITAF-216ENST00000574848 TMEM57Q8N5G2 664 aa13.11□□□□□ -0.31
LITAF-216ENST00000574848 WDR66Q8TBY9 1149 aa13.11□□□□□ -0.31
LITAF-216ENST00000574848 ZDHHC15Q96MV8 337 aa13.11□□□□□ -0.31
LITAF-216ENST00000574848 CSRNP1Q96S65 589 aa13.11□□□□□ -0.31
LITAF-216ENST00000574848 AAMPQ13685 434 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 TTLL12Q14166 644 aaPredicted RBP13.1□□□□□ -0.31
LITAF-216ENST00000574848 PDE3AQ14432 1141 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 RASA3Q14644 834 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 SUPT20HL1Q3ZLR7 823 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 HHIPL2Q6UWX4 724 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 TEKT1Q969V4 418 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 TEPSINQ96N21 525 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 TDRD3Q9H7E2 651 aaKnown RBP13.1□□□□□ -0.31
LITAF-216ENST00000574848 VEZTQ9HBM0 779 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
LITAF-216ENST00000574848 FKBP1CQ5VVH2 108 aa13.09□□□□□ -0.31
LITAF-216ENST00000574848 EXOC6Q8TAG9 804 aa13.09□□□□□ -0.31
LITAF-216ENST00000574848 RNF186Q9NXI6 227 aa13.09□□□□□ -0.31
LITAF-216ENST00000574848 ANGEL1Q9UNK9 670 aaKnown RBP13.09□□□□□ -0.31
LITAF-216ENST00000574848 PNMA6EA0A0J9YXQ4 647 aa13.08□□□□□ -0.32
LITAF-216ENST00000574848 PPP1R12BO60237 982 aaPredicted RBP13.08□□□□□ -0.32
LITAF-216ENST00000574848 PHKA1P46020 1223 aa13.08□□□□□ -0.32
LITAF-216ENST00000574848 POLA2Q14181 598 aa13.08□□□□□ -0.32
LITAF-216ENST00000574848 NBPF12Q5TAG4 269 aaPredicted RBP13.08□□□□□ -0.32
LITAF-216ENST00000574848 CCDC102BQ68D86 513 aa13.08□□□□□ -0.32
LITAF-216ENST00000574848 APOBEC3HQ6NTF7 200 aaKnown RBP13.08□□□□□ -0.32
LITAF-216ENST00000574848 GNL3LQ9NVN8 582 aaKnown RBP13.08□□□□□ -0.32
LITAF-216ENST00000574848 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.32
LITAF-216ENST00000574848 AKAP2Q9Y2D5 859 aa13.08□□□□□ -0.32
LITAF-216ENST00000574848 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 A0A1B0GUL7 405 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 ZBTB48P10074 688 aaPredicted RBP13.07□□□□□ -0.32
LITAF-216ENST00000574848 RLBP1P12271 317 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 ADORA1P30542 326 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 TM4SF4P48230 202 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 TNNI2P48788 182 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 SPRYD7Q5W111 196 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 FAM83AQ86UY5 434 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 FTSJ3Q8IY81 847 aaKnown RBP13.07□□□□□ -0.32
LITAF-216ENST00000574848 CRBNQ96SW2 442 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 CFHR5Q9BXR6 569 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 RFX7Q2KHR2 1363 aa13.07□□□□□ -0.32
LITAF-216ENST00000574848 USP2O75604 605 aaPredicted RBP13.06□□□□□ -0.32
LITAF-216ENST00000574848 PRDX5P30044 214 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 IREB2P48200 963 aaKnown RBP13.06□□□□□ -0.32
LITAF-216ENST00000574848 SREBF2Q12772 1141 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 TFCP2Q12800 502 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 RASGRF1Q13972 1273 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 PRKG1Q13976 671 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 MVPQ14764 893 aaKnown RBP13.06□□□□□ -0.32
LITAF-216ENST00000574848 NOM1Q5C9Z4 860 aaKnown RBP13.06□□□□□ -0.32
LITAF-216ENST00000574848 CDAN1Q8IWY9 1227 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 ZGPATQ8N5A5 531 aaKnown RBP13.06□□□□□ -0.32
LITAF-216ENST00000574848 SSH3Q8TE77 659 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 TMEM39BQ9GZU3 492 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 FZD1Q9UP38 647 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 DAGLAQ9Y4D2 1042 aa13.06□□□□□ -0.32
LITAF-216ENST00000574848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.06□□□□□ -0.32
LITAF-216ENST00000574848 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
LITAF-216ENST00000574848 TCP10L2B9ZVM9 353 aa13.05□□□□□ -0.32
LITAF-216ENST00000574848 ZBTB7BO15156 539 aaPredicted RBP13.05□□□□□ -0.32
LITAF-216ENST00000574848 TRPA1O75762 1119 aa13.05□□□□□ -0.32
LITAF-216ENST00000574848 LDHBP07195 334 aaKnown RBP13.05□□□□□ -0.32
LITAF-216ENST00000574848 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
LITAF-216ENST00000574848 XAGE2Q96GT9 111 aa13.05□□□□□ -0.32
LITAF-216ENST00000574848 WNK4Q96J92 1243 aa13.05□□□□□ -0.32
LITAF-216ENST00000574848 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms