RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 ZBTB7BO15156 539 aaPredicted RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 ZMYND10O75800 440 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 HOXB1P14653 301 aaPredicted RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 HIRAP54198 1017 aaPredicted RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 EMP3P54852 163 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 NUCB2P80303 420 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 KIAA2012Q0VF49 1180 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 SF3B3Q15393 1217 aaKnown RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 CST9Q5W186 159 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 CIAPIN1Q6FI81 312 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 DLK2Q6UY11 383 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 USP50Q70EL3 339 aaPredicted RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 MTERF4Q7Z6M4 381 aaKnown RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 TSPYL6Q8N831 410 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 KRI1Q8N9T8 703 aaKnown RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 TRPM4Q8TD43 1214 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 CCDC85AQ96PX6 553 aaPredicted RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 HS3ST6Q96QI5 342 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 MYD88Q99836 296 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 CWC22Q9HCG8 908 aaKnown RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 SEC31BQ9NQW1 1179 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 KCNQ5Q9NR82 932 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 IFT57Q9NWB7 429 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 NOB1Q9ULX3 412 aaKnown RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 NOL7Q9UMY1 257 aaKnown RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 NSFL1CQ9UNZ2 370 aaKnown RBP8.04□□□□□ -1.12
NUP88-206ENST00000573169 PCDHGA10Q9Y5H3 936 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 RASSF10A6NK89 507 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 C6orf229H3BNL8 230 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 BAG4O95429 457 aaKnown RBP8.03□□□□□ -1.12
NUP88-206ENST00000573169 FOSBP53539 338 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 GNAI1P63096 354 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 GRM1Q13255 1194 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 RABEP1Q15276 862 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 PPP4R3BQ5MIZ7 849 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.12
NUP88-206ENST00000573169 TSR2Q969E8 191 aaKnown RBP8.03□□□□□ -1.12
NUP88-206ENST00000573169 ZDHHC16Q969W1 377 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 BCL2L13Q9BXK5 485 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 GLIS2Q9BZE0 524 aaPredicted RBP8.03□□□□□ -1.12
NUP88-206ENST00000573169 VPS33BQ9H267 617 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 DBNDD1Q9H9R9 158 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 ADARB2Q9NS39 739 aaKnown RBP8.03□□□□□ -1.12
NUP88-206ENST00000573169 POLLQ9UGP5 575 aa8.03□□□□□ -1.12
NUP88-206ENST00000573169 WDR33Q9C0J8 1336 aaKnown RBP8.03□□□□□ -1.12
NUP88-206ENST00000573169 CDC45O75419 566 aa8.02□□□□□ -1.13
NUP88-206ENST00000573169 EGFRP00533 1210 aa8.02□□□□□ -1.13
NUP88-206ENST00000573169 NASPP49321 788 aaPredicted RBP8.02□□□□□ -1.13
NUP88-206ENST00000573169 RPS8P62241 208 aaKnown RBP8.02□□□□□ -1.13
NUP88-206ENST00000573169 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
NUP88-206ENST00000573169 HIC1Q14526 733 aa8.02□□□□□ -1.13
NUP88-206ENST00000573169 TNIP1Q15025 636 aa8.02□□□□□ -1.13
NUP88-206ENST00000573169 WASHC4Q2M389 1173 aa8.02□□□□□ -1.13
NUP88-206ENST00000573169 CYP4F22Q6NT55 531 aa8.02□□□□□ -1.13
NUP88-206ENST00000573169 ITPRIPQ8IWB1 547 aa8.02□□□□□ -1.13
NUP88-206ENST00000573169 IL17RAQ96F46 866 aa8.02□□□□□ -1.13
NUP88-206ENST00000573169 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
NUP88-206ENST00000573169 CNOT7Q9UIV1 285 aaKnown RBP8.02□□□□□ -1.13
NUP88-206ENST00000573169 LRRC37AA6NMS7 1700 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 WTIPA6NIX2 430 aaPredicted RBP8.01□□□□□ -1.13
NUP88-206ENST00000573169 PSMD14O00487 310 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 AOC2O75106 756 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 CELF2O95319 508 aaKnown RBP8.01□□□□□ -1.13
NUP88-206ENST00000573169 LBX1P52954 281 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 TBC1D9Q6ZT07 1266 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 KIAA1211Q6ZU35 1233 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 G2E3Q7L622 706 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 SAMD7Q7Z3H4 446 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 TMC4Q7Z404 712 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 ZBTB38Q8NAP3 1195 aaPredicted RBP8.01□□□□□ -1.13
NUP88-206ENST00000573169 TBC1D16Q8TBP0 767 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 ANP32BQ92688 251 aaKnown RBP8.01□□□□□ -1.13
NUP88-206ENST00000573169 AIDAQ96BJ3 306 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 CAPNS2Q96L46 248 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 ZNF408Q9H9D4 720 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 LMBRD1Q9NUN5 540 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 LHX6Q9UPM6 363 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 MAP3K2Q9Y2U5 619 aa8.01□□□□□ -1.13
NUP88-206ENST00000573169 RTL9Q8NET4 1388 aa8□□□□□ -1.13
NUP88-206ENST00000573169 ECE2O60344 883 aa8□□□□□ -1.13
NUP88-206ENST00000573169 PDE8AO60658 829 aa8□□□□□ -1.13
NUP88-206ENST00000573169 CD2BP2O95400 341 aaKnown RBP8□□□□□ -1.13
NUP88-206ENST00000573169 PCCAP05165 728 aaPredicted RBP8□□□□□ -1.13
NUP88-206ENST00000573169 IGKV5-2P06315 115 aa8□□□□□ -1.13
NUP88-206ENST00000573169 HSPA8P11142 646 aaKnown RBP8□□□□□ -1.13
NUP88-206ENST00000573169 CTCFP49711 727 aaPredicted RBP8□□□□□ -1.13
NUP88-206ENST00000573169 TBC1D10BQ4KMP7 808 aaPredicted RBP8□□□□□ -1.13
NUP88-206ENST00000573169 CCDC30Q5VVM6 783 aa8□□□□□ -1.13
NUP88-206ENST00000573169 USP48Q86UV5 1035 aa8□□□□□ -1.13
NUP88-206ENST00000573169 MRPL50Q8N5N7 158 aaKnown RBP8□□□□□ -1.13
NUP88-206ENST00000573169 CCDC191Q8NCU4 936 aa8□□□□□ -1.13
NUP88-206ENST00000573169 METTL22Q9BUU2 404 aaPredicted RBP8□□□□□ -1.13
NUP88-206ENST00000573169 CWC25Q9NXE8 425 aaPredicted RBP8□□□□□ -1.13
NUP88-206ENST00000573169 PGAP2Q9UHJ9 254 aa8□□□□□ -1.13
NUP88-206ENST00000573169 TLL2Q9Y6L7 1015 aa8□□□□□ -1.13
NUP88-206ENST00000573169 PI4KAP2A4QPH2 592 aa7.99□□□□□ -1.13
NUP88-206ENST00000573169 FAM205CA6NFA0 338 aa7.99□□□□□ -1.13
NUP88-206ENST00000573169 ADM5C9JUS6 153 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms