RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ADARB2Q9NS39 739 aaKnown RBP20.38■□□□□ 0.85
COMMD4-224ENST00000568877 AOX1Q06278 1338 aa20.37■□□□□ 0.85
COMMD4-224ENST00000568877 GOLIM4O00461 696 aa20.37■□□□□ 0.85
COMMD4-224ENST00000568877 EPHX2P34913 555 aa20.37■□□□□ 0.85
COMMD4-224ENST00000568877 TTF1Q15361 905 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-224ENST00000568877 TAF1DQ9H5J8 278 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-224ENST00000568877 PAG1Q9NWQ8 432 aa20.37■□□□□ 0.85
COMMD4-224ENST00000568877 LRP2BPQ9P2M1 347 aa20.37■□□□□ 0.85
COMMD4-224ENST00000568877 MAST3O60307 1309 aa20.36■□□□□ 0.85
COMMD4-224ENST00000568877 ZNF784Q8NCA9 323 aaPredicted RBP20.36■□□□□ 0.85
COMMD4-224ENST00000568877 EDC3Q96F86 508 aaKnown RBP20.36■□□□□ 0.85
COMMD4-224ENST00000568877 MYOZ2Q9NPC6 264 aa20.36■□□□□ 0.85
COMMD4-224ENST00000568877 RAI14Q9P0K7 980 aa20.36■□□□□ 0.85
COMMD4-224ENST00000568877 IGSF3O75054 1194 aa20.35■□□□□ 0.85
COMMD4-224ENST00000568877 HDLBPQ00341 1268 aaKnown RBP20.35■□□□□ 0.85
COMMD4-224ENST00000568877 RBM26Q5T8P6 1007 aaKnown RBP20.35■□□□□ 0.85
COMMD4-224ENST00000568877 SAMD7Q7Z3H4 446 aa20.35■□□□□ 0.85
COMMD4-224ENST00000568877 DZIP1Q86YF9 867 aaKnown RBP20.35■□□□□ 0.85
COMMD4-224ENST00000568877 MRIQ9BWK5 157 aa20.35■□□□□ 0.85
COMMD4-224ENST00000568877 SERPINA10Q9UK55 444 aa20.35■□□□□ 0.85
COMMD4-224ENST00000568877 SCN4AP35499 1836 aa20.34■□□□□ 0.85
COMMD4-224ENST00000568877 IDH1O75874 414 aaKnown RBP20.34■□□□□ 0.85
COMMD4-224ENST00000568877 EGFRP00533 1210 aa20.34■□□□□ 0.85
COMMD4-224ENST00000568877 MECOMQ03112 1051 aa20.34■□□□□ 0.85
COMMD4-224ENST00000568877 TBC1D10BQ4KMP7 808 aaPredicted RBP20.34■□□□□ 0.85
COMMD4-224ENST00000568877 USP50Q70EL3 339 aaPredicted RBP20.34■□□□□ 0.85
COMMD4-224ENST00000568877 TEKT1Q969V4 418 aa20.34■□□□□ 0.85
COMMD4-224ENST00000568877 MAP4K4O95819 1239 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-224ENST00000568877 CRKP46108 304 aa20.33■□□□□ 0.85
COMMD4-224ENST00000568877 MAP3K12Q12852 859 aa20.33■□□□□ 0.85
COMMD4-224ENST00000568877 KIF4BQ2VIQ3 1234 aa20.33■□□□□ 0.85
COMMD4-224ENST00000568877 CFAP100Q494V2 611 aa20.33■□□□□ 0.85
COMMD4-224ENST00000568877 PNMA8AQ86V59 439 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-224ENST00000568877 TRPM4Q8TD43 1214 aa20.33■□□□□ 0.85
COMMD4-224ENST00000568877 NSUN4Q96CB9 384 aaKnown RBP20.33■□□□□ 0.85
COMMD4-224ENST00000568877 RBM5P52756 815 aaKnown RBP eCLIP20.32■□□□□ 0.84
COMMD4-224ENST00000568877 HIRAP54198 1017 aaPredicted RBP20.32■□□□□ 0.84
COMMD4-224ENST00000568877 DLGAP5Q15398 846 aa20.32■□□□□ 0.84
COMMD4-224ENST00000568877 DIXDC1Q155Q3 683 aa20.32■□□□□ 0.84
COMMD4-224ENST00000568877 HHIPL2Q6UWX4 724 aa20.32■□□□□ 0.84
COMMD4-224ENST00000568877 SLF2Q8IX21 1173 aa20.32■□□□□ 0.84
COMMD4-224ENST00000568877 MTMR14Q8NCE2 650 aa20.32■□□□□ 0.84
COMMD4-224ENST00000568877 ZNF384Q8TF68 577 aa20.32■□□□□ 0.84
COMMD4-224ENST00000568877 GSTO1P78417 241 aa20.31■□□□□ 0.84
COMMD4-224ENST00000568877 NAA16Q6N069 864 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-224ENST00000568877 SKAP1Q86WV1 359 aa20.31■□□□□ 0.84
COMMD4-224ENST00000568877 FAM163AQ96GL9 167 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-224ENST00000568877 ZBED3Q96IU2 234 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-224ENST00000568877 ZDHHC15Q96MV8 337 aa20.31■□□□□ 0.84
COMMD4-224ENST00000568877 WNT10BO00744 389 aa20.3■□□□□ 0.84
COMMD4-224ENST00000568877 KIF3CO14782 793 aa20.3■□□□□ 0.84
COMMD4-224ENST00000568877 LDHCP07864 332 aa20.3■□□□□ 0.84
COMMD4-224ENST00000568877 EAPPQ56P03 285 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-224ENST00000568877 KBTBD3Q8NAB2 608 aa20.3■□□□□ 0.84
COMMD4-224ENST00000568877 PRMT6Q96LA8 375 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-224ENST00000568877 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.84
COMMD4-224ENST00000568877 PCDHAC2Q9Y5I4 1007 aa20.3■□□□□ 0.84
COMMD4-224ENST00000568877 GTF3C3Q9Y5Q9 886 aa20.3■□□□□ 0.84
COMMD4-224ENST00000568877 SPDYE2BA6NHP3 402 aa20.29■□□□□ 0.84
COMMD4-224ENST00000568877 SPDYE6P0CI01 402 aa20.29■□□□□ 0.84
COMMD4-224ENST00000568877 NBPF9Q3BBW0 867 aa20.29■□□□□ 0.84
COMMD4-224ENST00000568877 SLC9C2Q5TAH2 1124 aa20.29■□□□□ 0.84
COMMD4-224ENST00000568877 TMED8Q6PL24 325 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-224ENST00000568877 MAGEB6Q8N7X4 407 aa20.29■□□□□ 0.84
COMMD4-224ENST00000568877 EVI5LQ96CN4 794 aa20.29■□□□□ 0.84
COMMD4-224ENST00000568877 DAGLAQ9Y4D2 1042 aa20.29■□□□□ 0.84
COMMD4-224ENST00000568877 MROH7-TTC4A0A0A0MT08 1334 aa20.28■□□□□ 0.84
COMMD4-224ENST00000568877 GAKO14976 1311 aa20.28■□□□□ 0.84
COMMD4-224ENST00000568877 TTC22Q5TAA0 569 aa20.28■□□□□ 0.84
COMMD4-224ENST00000568877 APOBEC3HQ6NTF7 200 aaKnown RBP20.28■□□□□ 0.84
COMMD4-224ENST00000568877 TRIM6-TRIM34B2RNG4 842 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 POTEIP0CG38 1075 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 POTEJP0CG39 1038 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 PDE6AP16499 860 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 CYP7A1P22680 504 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 RGS3P49796 1198 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 CNTROBQ8N137 903 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 ZC3H15Q8WU90 426 aaKnown RBP20.27■□□□□ 0.84
COMMD4-224ENST00000568877 FSD1Q9BTV5 496 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 CLEC11AQ9Y240 323 aa20.27■□□□□ 0.84
COMMD4-224ENST00000568877 DOCK2Q92608 1830 aa20.26■□□□□ 0.83
COMMD4-224ENST00000568877 GPR75-ASB3A0A0A6YYF3 556 aa20.26■□□□□ 0.83
COMMD4-224ENST00000568877 MYO1BO43795 1136 aa20.26■□□□□ 0.83
COMMD4-224ENST00000568877 GSPT1P15170 499 aaKnown RBP20.26■□□□□ 0.83
COMMD4-224ENST00000568877 ADD2P35612 726 aa20.26■□□□□ 0.83
COMMD4-224ENST00000568877 LDHDQ86WU2 507 aa20.26■□□□□ 0.83
COMMD4-224ENST00000568877 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
COMMD4-224ENST00000568877 PGAP2Q9UHJ9 254 aa20.26■□□□□ 0.83
COMMD4-224ENST00000568877 ASTN2O75129 1339 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-224ENST00000568877 ZNF532Q9HCE3 1301 aa20.26■□□□□ 0.83
COMMD4-224ENST00000568877 TCRBV5S4A2TA0A5A2 114 aa20.25■□□□□ 0.83
COMMD4-224ENST00000568877 BTDP43251 543 aa20.25■□□□□ 0.83
COMMD4-224ENST00000568877 UBE3CQ15386 1083 aa20.25■□□□□ 0.83
COMMD4-224ENST00000568877 LRRFIP1Q32MZ4 808 aaKnown RBP20.25■□□□□ 0.83
COMMD4-224ENST00000568877 ADGRA1Q86SQ6 560 aa20.25■□□□□ 0.83
COMMD4-224ENST00000568877 TDRD3Q9H7E2 651 aaKnown RBP20.25■□□□□ 0.83
COMMD4-224ENST00000568877 MAST2Q6P0Q8 1798 aa20.25■□□□□ 0.83
COMMD4-224ENST00000568877 MYO5AQ9Y4I1 1855 aaKnown RBP20.24■□□□□ 0.83
COMMD4-224ENST00000568877 ADAMTSL1Q8N6G6 1762 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms