RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 ZFYP08048 801 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 GSTO1P78417 241 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 SKAP1Q86WV1 359 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 DZIP1Q86YF9 867 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 CERS5Q8N5B7 392 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 DNAJC5GQ8N7S2 189 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 DPF2Q92785 391 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 ANTXR1Q9H6X2 564 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 RAI14Q9P0K7 980 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 HDAC9Q9UKV0 1011 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 GJA3Q9Y6H8 435 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 NDUFB9Q9Y6M9 179 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 HIP1O00291 1037 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 SDSP20132 328 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 PRDX5P30044 214 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 APLP1P51693 650 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 HDLBPQ00341 1268 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 OGFOD1Q8N543 542 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 EDC3Q96F86 508 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 GMLQ99445 158 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 MRIQ9BWK5 157 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 MYH7P12883 1935 aa12.36□□□□□ -0.43
HERPUD1-216ENST00000568814 GLTPD2A6NH11 291 aa12.35□□□□□ -0.43
HERPUD1-216ENST00000568814 KIF3CO14782 793 aa12.35□□□□□ -0.43
HERPUD1-216ENST00000568814 LDHCP07864 332 aa12.35□□□□□ -0.43
HERPUD1-216ENST00000568814 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
HERPUD1-216ENST00000568814 GMPSP49915 693 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-216ENST00000568814 HTRA3P83110 453 aa12.35□□□□□ -0.43
HERPUD1-216ENST00000568814 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
HERPUD1-216ENST00000568814 L3MBTL3Q96JM7 780 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-216ENST00000568814 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
HERPUD1-216ENST00000568814 RNF113AO15541 343 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 PDE6AP16499 860 aa12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 LMOD1P29536 600 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 MECOMQ03112 1051 aa12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 NAA16Q6N069 864 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 HHIPL2Q6UWX4 724 aa12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 CERS3Q8IU89 383 aa12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 TEKT1Q969V4 418 aa12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 NSUN4Q96CB9 384 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 MXD3Q9BW11 206 aa12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 SERPINA10Q9UK55 444 aa12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 MYO5AQ9Y4I1 1855 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-216ENST00000568814 F8W031 263 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 DDNO94850 711 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 ADD2P35612 726 aa12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 ZNF280AP59817 542 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 GRIK5Q16478 980 aa12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 CASC1Q6TDU7 716 aa12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 NOL10Q9BSC4 688 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 DIAPH3Q9NSV4 1193 aa12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 GPRC5DQ9NZD1 345 aa12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 MROH7-TTC4A0A0A0MT08 1334 aa12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 GAKO14976 1311 aa12.33□□□□□ -0.44
HERPUD1-216ENST00000568814 IQCA1LA6NCM1 817 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 H7C1D1 291 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 CDC45O75419 566 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 CYP7A1P22680 504 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 SCNN1DP51172 638 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 MTMR14Q8NCE2 650 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 APPBP2Q92624 585 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 CNOT7Q9UIV1 285 aaKnown RBP12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 ZNF532Q9HCE3 1301 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 SCN4AP35499 1836 aa12.32□□□□□ -0.44
HERPUD1-216ENST00000568814 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 BAG3O95817 575 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 PLCG2P16885 1265 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 CRKP46108 304 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 ZMYM1Q5SVZ6 1142 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 ZNF384Q8TF68 577 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 RUFY2Q8WXA3 655 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 ZDHHC15Q96MV8 337 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 HELLSQ9NRZ9 838 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 HACL1Q9UJ83 578 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 DAGLAQ9Y4D2 1042 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 RAD50Q92878 1312 aa12.31□□□□□ -0.44
HERPUD1-216ENST00000568814 GPR75-ASB3A0A0A6YYF3 556 aa12.3□□□□□ -0.44
HERPUD1-216ENST00000568814 CHMLP26374 656 aa12.3□□□□□ -0.44
HERPUD1-216ENST00000568814 RBM5P52756 815 aaKnown RBP eCLIP12.3□□□□□ -0.44
HERPUD1-216ENST00000568814 MFAP1P55081 439 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-216ENST00000568814 DLGAP5Q15398 846 aa12.3□□□□□ -0.44
HERPUD1-216ENST00000568814 CFAP100Q494V2 611 aa12.3□□□□□ -0.44
HERPUD1-216ENST00000568814 MYOZ2Q9NPC6 264 aa12.3□□□□□ -0.44
HERPUD1-216ENST00000568814 ADARB2Q9NS39 739 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-216ENST00000568814 MAGEB6P1A0A0J9YX57 407 aa12.29□□□□□ -0.44
HERPUD1-216ENST00000568814 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
HERPUD1-216ENST00000568814 MYO1BO43795 1136 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms