RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ABCB7O75027 752 aa11.84□□□□□ -0.51
SF3B3-211ENST00000568291 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
SF3B3-211ENST00000568291 GNAI2P04899 355 aa11.84□□□□□ -0.51
SF3B3-211ENST00000568291 IL1R1P14778 569 aa11.84□□□□□ -0.51
SF3B3-211ENST00000568291 AOX1Q06278 1338 aa11.84□□□□□ -0.51
SF3B3-211ENST00000568291 ADORA1P30542 326 aa11.83□□□□□ -0.52
SF3B3-211ENST00000568291 C20orf194Q5TEA3 1177 aa11.83□□□□□ -0.52
SF3B3-211ENST00000568291 FBXO33Q7Z6M2 555 aa11.83□□□□□ -0.52
SF3B3-211ENST00000568291 VPS37DQ86XT2 251 aa11.83□□□□□ -0.52
SF3B3-211ENST00000568291 APOBEC3FQ8IUX4 373 aaKnown RBP11.83□□□□□ -0.52
SF3B3-211ENST00000568291 TDRD7Q8NHU6 1098 aaKnown RBP11.83□□□□□ -0.52
SF3B3-211ENST00000568291 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.52
SF3B3-211ENST00000568291 HDAC9Q9UKV0 1011 aa11.83□□□□□ -0.52
SF3B3-211ENST00000568291 ZBTB7BO15156 539 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-211ENST00000568291 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-211ENST00000568291 FGFR2P21802 821 aa11.82□□□□□ -0.52
SF3B3-211ENST00000568291 TIMM10P62072 90 aa11.82□□□□□ -0.52
SF3B3-211ENST00000568291 TFCP2Q12800 502 aa11.82□□□□□ -0.52
SF3B3-211ENST00000568291 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
SF3B3-211ENST00000568291 PUM3Q15397 648 aaKnown RBP11.82□□□□□ -0.52
SF3B3-211ENST00000568291 CEP126Q9P2H0 1117 aa11.82□□□□□ -0.52
SF3B3-211ENST00000568291 COG6Q9Y2V7 657 aa11.82□□□□□ -0.52
SF3B3-211ENST00000568291 SSC5DA1L4H1 1573 aa11.82□□□□□ -0.52
SF3B3-211ENST00000568291 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
SF3B3-211ENST00000568291 MMP14P50281 582 aa11.81□□□□□ -0.52
SF3B3-211ENST00000568291 RBM5P52756 815 aaKnown RBP eCLIP11.81□□□□□ -0.52
SF3B3-211ENST00000568291 PRKG1Q13976 671 aa11.81□□□□□ -0.52
SF3B3-211ENST00000568291 CAVIN4Q5BKX8 364 aa11.81□□□□□ -0.52
SF3B3-211ENST00000568291 MFSD14BQ5SR56 506 aa11.81□□□□□ -0.52
SF3B3-211ENST00000568291 ARMC9Q7Z3E5 817 aa11.81□□□□□ -0.52
SF3B3-211ENST00000568291 COPRSQ9NQ92 184 aa11.81□□□□□ -0.52
SF3B3-211ENST00000568291 CLRN2A0PK11 232 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 CIAO1O76071 339 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 TBC1D8O95759 1140 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 SLC5A1P13866 664 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 IL15P40933 162 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-211ENST00000568291 SREBF2Q12772 1141 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 MTX1Q13505 466 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 ZNF296Q8WUU4 475 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-211ENST00000568291 LPIN2Q92539 896 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-211ENST00000568291 BCL11AQ9H165 835 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-211ENST00000568291 FZD1Q9UP38 647 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 HDAC5Q9UQL6 1122 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
SF3B3-211ENST00000568291 PHKA1P46020 1223 aa11.79□□□□□ -0.52
SF3B3-211ENST00000568291 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
SF3B3-211ENST00000568291 DLGAP5Q15398 846 aa11.79□□□□□ -0.52
SF3B3-211ENST00000568291 CFAP100Q494V2 611 aa11.79□□□□□ -0.52
SF3B3-211ENST00000568291 PRMT6Q96LA8 375 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-211ENST00000568291 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
SF3B3-211ENST00000568291 ANGEL1Q9UNK9 670 aaKnown RBP11.79□□□□□ -0.52
SF3B3-211ENST00000568291 TTF2Q9UNY4 1162 aaKnown RBP11.79□□□□□ -0.52
SF3B3-211ENST00000568291 TNRC18O15417 2968 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-211ENST00000568291 RBBP6Q7Z6E9 1792 aaKnown RBP11.78□□□□□ -0.52
SF3B3-211ENST00000568291 GPR25O00155 361 aa11.78□□□□□ -0.52
SF3B3-211ENST00000568291 TM4SF4P48230 202 aa11.78□□□□□ -0.52
SF3B3-211ENST00000568291 PKN2Q16513 984 aaKnown RBP11.78□□□□□ -0.52
SF3B3-211ENST00000568291 FAM205AQ6ZU69 1335 aa11.78□□□□□ -0.52
SF3B3-211ENST00000568291 A0A1B0GUL7 405 aa11.77□□□□□ -0.53
SF3B3-211ENST00000568291 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.53
SF3B3-211ENST00000568291 G3BP1Q13283 466 aaKnown RBP eCLIP11.77□□□□□ -0.533e-8■■■□□ 15.3
SF3B3-211ENST00000568291 POLA2Q14181 598 aa11.77□□□□□ -0.53
SF3B3-211ENST00000568291 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.53
SF3B3-211ENST00000568291 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
SF3B3-211ENST00000568291 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
SF3B3-211ENST00000568291 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.53
SF3B3-211ENST00000568291 TDRD3Q9H7E2 651 aaKnown RBP11.77□□□□□ -0.53
SF3B3-211ENST00000568291 VEZTQ9HBM0 779 aa11.77□□□□□ -0.53
SF3B3-211ENST00000568291 PPP2R3BQ9Y5P8 575 aa11.77□□□□□ -0.53
SF3B3-211ENST00000568291 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 FKTNO75072 461 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 CACNB3P54284 484 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 OS9Q13438 667 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-211ENST00000568291 MVPQ14764 893 aaKnown RBP11.76□□□□□ -0.53
SF3B3-211ENST00000568291 CCDC102BQ68D86 513 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 CEP85Q6P2H3 762 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 MTMR14Q8NCE2 650 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 SSH3Q8TE77 659 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 CFHR5Q9BXR6 569 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
SF3B3-211ENST00000568291 MANSC4A6NHS7 340 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-211ENST00000568291 APBB1O00213 710 aa11.75□□□□□ -0.53
SF3B3-211ENST00000568291 MYO1BO43795 1136 aa11.75□□□□□ -0.53
SF3B3-211ENST00000568291 CRKP46108 304 aa11.75□□□□□ -0.53
SF3B3-211ENST00000568291 FKBP1AP62942 108 aaKnown RBP11.75□□□□□ -0.53
SF3B3-211ENST00000568291 MAP3K11Q16584 847 aa11.75□□□□□ -0.53
SF3B3-211ENST00000568291 FBXO46Q6PJ61 603 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-211ENST00000568291 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
SF3B3-211ENST00000568291 WNK4Q96J92 1243 aa11.75□□□□□ -0.53
SF3B3-211ENST00000568291 CLMNQ96JQ2 1002 aa11.75□□□□□ -0.53
SF3B3-211ENST00000568291 R3HDMLQ9H3Y0 253 aa11.75□□□□□ -0.53
SF3B3-211ENST00000568291 EXOC6BQ9Y2D4 811 aa11.75□□□□□ -0.53
SF3B3-211ENST00000568291 KIAA0100Q14667 2235 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms