RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ZC3H15Q8WU90 426 aaKnown RBP14.85□□□□□ -0.03
SF3B3-208ENST00000567250 ABCF2Q9UG63 623 aa14.85□□□□□ -0.03
SF3B3-208ENST00000567250 SERPINA10Q9UK55 444 aa14.85□□□□□ -0.03
SF3B3-208ENST00000567250 TTC41PQ6P2S7 1318 aa14.85□□□□□ -0.03
SF3B3-208ENST00000567250 MYO1BO43795 1136 aa14.84□□□□□ -0.03
SF3B3-208ENST00000567250 TTF1Q15361 905 aaPredicted RBP14.84□□□□□ -0.03
SF3B3-208ENST00000567250 TBC1D10BQ4KMP7 808 aaPredicted RBP14.84□□□□□ -0.03
SF3B3-208ENST00000567250 ERICH6BQ5W0A0 696 aa14.84□□□□□ -0.03
SF3B3-208ENST00000567250 ERICH6Q7L0X2 663 aa14.84□□□□□ -0.03
SF3B3-208ENST00000567250 SAMD7Q7Z3H4 446 aa14.84□□□□□ -0.03
SF3B3-208ENST00000567250 TRPM4Q8TD43 1214 aa14.84□□□□□ -0.03
SF3B3-208ENST00000567250 TEKT1Q969V4 418 aa14.84□□□□□ -0.03
SF3B3-208ENST00000567250 RNF39Q9H2S5 420 aa14.84□□□□□ -0.03
SF3B3-208ENST00000567250 ECHDC1Q9NTX5 307 aa14.84□□□□□ -0.03
SF3B3-208ENST00000567250 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
SF3B3-208ENST00000567250 SHTN1A0MZ66 631 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 ERC2O15083 957 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 IGHDP01880 384 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 PRDX5P30044 214 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 RBM5P52756 815 aaKnown RBP eCLIP14.83□□□□□ -0.04
SF3B3-208ENST00000567250 SCARF1Q14162 830 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 DLGAP5Q15398 846 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 RBM26Q5T8P6 1007 aaKnown RBP14.83□□□□□ -0.04
SF3B3-208ENST00000567250 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 PI16Q6UXB8 463 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 MTMR14Q8NCE2 650 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 AK9Q5TCS8 1911 aa14.83□□□□□ -0.04
SF3B3-208ENST00000567250 ATP5JP18859 108 aa14.82□□□□□ -0.04
SF3B3-208ENST00000567250 MX1P20591 662 aa14.82□□□□□ -0.04
SF3B3-208ENST00000567250 CRKP46108 304 aa14.82□□□□□ -0.04
SF3B3-208ENST00000567250 GSTO1P78417 241 aa14.82□□□□□ -0.04
SF3B3-208ENST00000567250 FSTL1Q12841 308 aa14.82□□□□□ -0.04
SF3B3-208ENST00000567250 TMED8Q6PL24 325 aaPredicted RBP14.82□□□□□ -0.04
SF3B3-208ENST00000567250 CHD1LQ86WJ1 897 aa14.82□□□□□ -0.04
SF3B3-208ENST00000567250 LRP2BPQ9P2M1 347 aa14.82□□□□□ -0.04
SF3B3-208ENST00000567250 PITPNM2Q9BZ72 1349 aa14.82□□□□□ -0.04
SF3B3-208ENST00000567250 TRPM7Q96QT4 1865 aa14.82□□□□□ -0.04
SF3B3-208ENST00000567250 ZAP70P43403 619 aa14.81□□□□□ -0.04
SF3B3-208ENST00000567250 NUCB1Q02818 461 aa14.81□□□□□ -0.04
SF3B3-208ENST00000567250 CFAP100Q494V2 611 aa14.81□□□□□ -0.04
SF3B3-208ENST00000567250 B4GALNT3Q6L9W6 998 aa14.81□□□□□ -0.04
SF3B3-208ENST00000567250 HHIPL2Q6UWX4 724 aa14.81□□□□□ -0.04
SF3B3-208ENST00000567250 DCPSQ96C86 337 aaKnown RBP14.81□□□□□ -0.04
SF3B3-208ENST00000567250 DNAJC2Q99543 621 aaKnown RBP14.81□□□□□ -0.04
SF3B3-208ENST00000567250 MRIQ9BWK5 157 aa14.81□□□□□ -0.04
SF3B3-208ENST00000567250 SNRKQ9NRH2 765 aa14.81□□□□□ -0.04
SF3B3-208ENST00000567250 RAI14Q9P0K7 980 aa14.81□□□□□ -0.04
SF3B3-208ENST00000567250 SPDYE2BA6NHP3 402 aa14.8□□□□□ -0.04
SF3B3-208ENST00000567250 WNT10BO00744 389 aa14.8□□□□□ -0.04
SF3B3-208ENST00000567250 GLRX3O76003 335 aaKnown RBP14.8□□□□□ -0.04
SF3B3-208ENST00000567250 EGFRP00533 1210 aa14.8□□□□□ -0.04
SF3B3-208ENST00000567250 CYP2E1P05181 493 aaPredicted RBP14.8□□□□□ -0.04
SF3B3-208ENST00000567250 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
SF3B3-208ENST00000567250 CENPQQ7L2Z9 268 aaPredicted RBP14.8□□□□□ -0.04
SF3B3-208ENST00000567250 CCDC136Q96JN2 1154 aa14.8□□□□□ -0.04
SF3B3-208ENST00000567250 LNPKQ9C0E8 428 aa14.8□□□□□ -0.04
SF3B3-208ENST00000567250 PAG1Q9NWQ8 432 aa14.8□□□□□ -0.04
SF3B3-208ENST00000567250 GGA3Q9NZ52 723 aa14.8□□□□□ -0.04
SF3B3-208ENST00000567250 POLR2AP24928 1970 aaKnown RBP14.8□□□□□ -0.04
SF3B3-208ENST00000567250 LDHCP07864 332 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 HIRAP54198 1017 aaPredicted RBP14.79□□□□□ -0.04
SF3B3-208ENST00000567250 AOX1Q06278 1338 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 MAP3K12Q12852 859 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 TNFAIP1Q13829 316 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 GRIK5Q16478 980 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 FOCADQ5VW36 1801 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 APOBEC3FQ8IUX4 373 aaKnown RBP14.79□□□□□ -0.04
SF3B3-208ENST00000567250 SULF1Q8IWU6 871 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 ZBED3Q96IU2 234 aaPredicted RBP14.79□□□□□ -0.04
SF3B3-208ENST00000567250 ZDHHC15Q96MV8 337 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 HAUS7Q99871 368 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 NOL10Q9BSC4 688 aaKnown RBP14.79□□□□□ -0.04
SF3B3-208ENST00000567250 BOLA2Q9H3K6 86 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 TMOD2Q9NZR1 351 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 PGAP2Q9UHJ9 254 aa14.79□□□□□ -0.04
SF3B3-208ENST00000567250 MROH7-TTC4A0A0A0MT08 1334 aa14.78□□□□□ -0.04
SF3B3-208ENST00000567250 SALL3Q9BXA9 1300 aa14.78□□□□□ -0.04
SF3B3-208ENST00000567250 GOLIM4O00461 696 aa14.78□□□□□ -0.04
SF3B3-208ENST00000567250 IDH1O75874 414 aaKnown RBP14.78□□□□□ -0.04
SF3B3-208ENST00000567250 MECOMQ03112 1051 aa14.78□□□□□ -0.04
SF3B3-208ENST00000567250 NBPF9Q3BBW0 867 aa14.78□□□□□ -0.04
SF3B3-208ENST00000567250 ANGEL2Q5VTE6 544 aaKnown RBP14.78□□□□□ -0.04
SF3B3-208ENST00000567250 TBC1D9Q6ZT07 1266 aa14.78□□□□□ -0.04
SF3B3-208ENST00000567250 CDC37L1Q7L3B6 337 aa14.78□□□□□ -0.04
SF3B3-208ENST00000567250 NSUN4Q96CB9 384 aaKnown RBP14.78□□□□□ -0.04
SF3B3-208ENST00000567250 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.78□□□□□ -0.042e-7■■■□□ 14.9
SF3B3-208ENST00000567250 GAKO14976 1311 aa14.77□□□□□ -0.04
SF3B3-208ENST00000567250 DIXDC1Q155Q3 683 aa14.77□□□□□ -0.05
SF3B3-208ENST00000567250 LRRFIP1Q32MZ4 808 aaKnown RBP14.77□□□□□ -0.05
SF3B3-208ENST00000567250 MAP1SQ66K74 1059 aaPredicted RBP14.77□□□□□ -0.05
SF3B3-208ENST00000567250 NAA16Q6N069 864 aaPredicted RBP14.77□□□□□ -0.05
SF3B3-208ENST00000567250 CERS3Q8IU89 383 aa14.77□□□□□ -0.05
SF3B3-208ENST00000567250 CNTROBQ8N137 903 aa14.77□□□□□ -0.05
SF3B3-208ENST00000567250 PIH1D3Q9NQM4 214 aaKnown RBP14.77□□□□□ -0.05
SF3B3-208ENST00000567250 DAGLAQ9Y4D2 1042 aa14.77□□□□□ -0.05
SF3B3-208ENST00000567250 CDK5RAP2Q96SN8 1893 aa14.77□□□□□ -0.05
SF3B3-208ENST00000567250 TNNI2P48788 182 aa14.76□□□□□ -0.05
SF3B3-208ENST00000567250 PDE1AP54750 535 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms