RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MYH7P12883 1935 aa15.32■□□□□ 0.04
SF3B3-206ENST00000565990 MYH2Q9UKX2 1941 aa15.32■□□□□ 0.04
SF3B3-206ENST00000565990 GOLIM4O00461 696 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 PRDX5P30044 214 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 TTC22Q5TAA0 569 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 HHIPL2Q6UWX4 724 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 SKAP1Q86WV1 359 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 KIAA0825Q8IV33 1275 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 MTMR14Q8NCE2 650 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 NSUN4Q96CB9 384 aaKnown RBP15.31■□□□□ 0.04
SF3B3-206ENST00000565990 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 EDC3Q96F86 508 aaKnown RBP15.31■□□□□ 0.04
SF3B3-206ENST00000565990 DNAJC2Q99543 621 aaKnown RBP15.31■□□□□ 0.04
SF3B3-206ENST00000565990 LRP2BPQ9P2M1 347 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 ABCF2Q9UG63 623 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
SF3B3-206ENST00000565990 TTF2Q9UNY4 1162 aaKnown RBP15.31■□□□□ 0.04
SF3B3-206ENST00000565990 EPS15P42566 896 aa15.3■□□□□ 0.04
SF3B3-206ENST00000565990 MECOMQ03112 1051 aa15.3■□□□□ 0.04
SF3B3-206ENST00000565990 MICALL2Q8IY33 904 aa15.3■□□□□ 0.04
SF3B3-206ENST00000565990 OGFOD1Q8N543 542 aa15.3■□□□□ 0.04
SF3B3-206ENST00000565990 KBTBD3Q8NAB2 608 aa15.3■□□□□ 0.04
SF3B3-206ENST00000565990 DDRGK1Q96HY6 314 aa15.3■□□□□ 0.04
SF3B3-206ENST00000565990 ZBED3Q96IU2 234 aaPredicted RBP15.3■□□□□ 0.04
SF3B3-206ENST00000565990 AK9Q5TCS8 1911 aa15.29■□□□□ 0.04
SF3B3-206ENST00000565990 MAST3O60307 1309 aa15.29■□□□□ 0.04
SF3B3-206ENST00000565990 SHTN1A0MZ66 631 aa15.29■□□□□ 0.04
SF3B3-206ENST00000565990 H7C1D1 291 aa15.29■□□□□ 0.04
SF3B3-206ENST00000565990 VEGFAP15692 232 aaPredicted RBP15.29■□□□□ 0.04
SF3B3-206ENST00000565990 MAP3K12Q12852 859 aa15.29■□□□□ 0.04
SF3B3-206ENST00000565990 HDAC9Q9UKV0 1011 aa15.29■□□□□ 0.04
SF3B3-206ENST00000565990 IQCA1LA6NCM1 817 aa15.28■□□□□ 0.04
SF3B3-206ENST00000565990 F8W031 263 aaPredicted RBP15.28■□□□□ 0.04
SF3B3-206ENST00000565990 MAP4K4O95819 1239 aaPredicted RBP15.28■□□□□ 0.04
SF3B3-206ENST00000565990 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
SF3B3-206ENST00000565990 ZDHHC15Q96MV8 337 aa15.28■□□□□ 0.04
SF3B3-206ENST00000565990 RRAGCQ9HB90 399 aa15.28■□□□□ 0.04
SF3B3-206ENST00000565990 MYOZ2Q9NPC6 264 aa15.28■□□□□ 0.04
SF3B3-206ENST00000565990 RAI14Q9P0K7 980 aa15.28■□□□□ 0.04
SF3B3-206ENST00000565990 HACL1Q9UJ83 578 aa15.28■□□□□ 0.04
SF3B3-206ENST00000565990 POLR2AP24928 1970 aaKnown RBP15.27■□□□□ 0.04
SF3B3-206ENST00000565990 GAKO14976 1311 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 GPR75-ASB3A0A0A6YYF3 556 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 TCRBV5S4A2TA0A5A2 114 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 LDHCP07864 332 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 SDSP20132 328 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 LMOD1P29536 600 aaPredicted RBP15.27■□□□□ 0.04
SF3B3-206ENST00000565990 CRKP46108 304 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 GSTO1P78417 241 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 UBE3CQ15386 1083 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 SLC9C2Q5TAH2 1124 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 SLF2Q8IX21 1173 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 PRMT6Q96LA8 375 aaPredicted RBP15.27■□□□□ 0.04
SF3B3-206ENST00000565990 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.27■□□□□ 0.04
SF3B3-206ENST00000565990 TAF1DQ9H5J8 278 aaPredicted RBP15.27■□□□□ 0.04
SF3B3-206ENST00000565990 ADARB2Q9NS39 739 aaKnown RBP15.27■□□□□ 0.04
SF3B3-206ENST00000565990 PGAP2Q9UHJ9 254 aa15.27■□□□□ 0.04
SF3B3-206ENST00000565990 IDH1O75874 414 aaKnown RBP15.26■□□□□ 0.03
SF3B3-206ENST00000565990 EGFRP00533 1210 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 ZFYP08048 801 aaPredicted RBP15.26■□□□□ 0.03
SF3B3-206ENST00000565990 PDE6AP16499 860 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 ADD2P35612 726 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 RGS3P49796 1198 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 HIRAP54198 1017 aaPredicted RBP15.26■□□□□ 0.03
SF3B3-206ENST00000565990 PPP4CP60510 307 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 BMP2KLQ5H9B9 411 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 NAA16Q6N069 864 aaPredicted RBP15.26■□□□□ 0.03
SF3B3-206ENST00000565990 ZSCAN25Q6NSZ9 544 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 APOBEC3HQ6NTF7 200 aaKnown RBP15.26■□□□□ 0.03
SF3B3-206ENST00000565990 USP50Q70EL3 339 aaPredicted RBP15.26■□□□□ 0.03
SF3B3-206ENST00000565990 SAMD7Q7Z3H4 446 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 DZIP1Q86YF9 867 aaKnown RBP15.26■□□□□ 0.03
SF3B3-206ENST00000565990 CNTROBQ8N137 903 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 TEKT1Q969V4 418 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 ECM29Q5VYK3 1845 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 MAST2Q6P0Q8 1798 aa15.26■□□□□ 0.03
SF3B3-206ENST00000565990 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
SF3B3-206ENST00000565990 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
SF3B3-206ENST00000565990 YY1P25490 414 aa15.25■□□□□ 0.03
SF3B3-206ENST00000565990 EPHX2P34913 555 aa15.25■□□□□ 0.03
SF3B3-206ENST00000565990 DLGAP5Q15398 846 aa15.25■□□□□ 0.03
SF3B3-206ENST00000565990 DIXDC1Q155Q3 683 aa15.25■□□□□ 0.03
SF3B3-206ENST00000565990 CFAP100Q494V2 611 aa15.25■□□□□ 0.03
SF3B3-206ENST00000565990 ADGRA1Q86SQ6 560 aa15.25■□□□□ 0.03
SF3B3-206ENST00000565990 PNMA8AQ86V59 439 aaPredicted RBP15.25■□□□□ 0.03
SF3B3-206ENST00000565990 MAGEB6Q8N7X4 407 aa15.25■□□□□ 0.03
SF3B3-206ENST00000565990 DAGLAQ9Y4D2 1042 aa15.25■□□□□ 0.03
SF3B3-206ENST00000565990 ADAMTSL1Q8N6G6 1762 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 MROH7-TTC4A0A0A0MT08 1334 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 ZNF532Q9HCE3 1301 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 WNT10BO00744 389 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 CYP7A1P22680 504 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 LRRFIP1Q32MZ4 808 aaKnown RBP15.24■□□□□ 0.03
SF3B3-206ENST00000565990 ZC3H15Q8WU90 426 aaKnown RBP15.24■□□□□ 0.03
SF3B3-206ENST00000565990 RILPL2Q969X0 211 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 FSD1Q9BTV5 496 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 NMRK2Q9NPI5 230 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms