RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ZNF70Q9UC06 446 aaPredicted RBP15.23■□□□□ 0.03
GTF3C1-204ENST00000564664 CIAO1O76071 339 aa15.22■□□□□ 0.03
GTF3C1-204ENST00000564664 CTU1Q7Z7A3 348 aaKnown RBP15.22■□□□□ 0.03
GTF3C1-204ENST00000564664 PCDHAC2Q9Y5I4 1007 aa15.22■□□□□ 0.03
GTF3C1-204ENST00000564664 ECM29Q5VYK3 1845 aa15.22■□□□□ 0.03
GTF3C1-204ENST00000564664 MAST3O60307 1309 aa15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 ZBTB22O15209 634 aa15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 USP2O75604 605 aaPredicted RBP15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 SLC5A1P13866 664 aa15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 BCAMP50895 628 aa15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 NBPF12Q5TAG4 269 aaPredicted RBP15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 ANKRD13AQ8IZ07 590 aa15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 KLHDC4Q8TBB5 520 aa15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 TEKT1Q969V4 418 aa15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 TDRD3Q9H7E2 651 aaKnown RBP15.21■□□□□ 0.03
GTF3C1-204ENST00000564664 IPO8O15397 1037 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 TBC1D8O95759 1140 aa15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 RARSP54136 660 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 FKBP1CQ5VVH2 108 aa15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 OTUD7BQ6GQQ9 843 aa15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 HHIPL2Q6UWX4 724 aa15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 WDR66Q8TBY9 1149 aa15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 HOOK2Q96ED9 719 aa15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 ZDHHC15Q96MV8 337 aa15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 GNL3LQ9NVN8 582 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 CEP126Q9P2H0 1117 aa15.2■□□□□ 0.02
GTF3C1-204ENST00000564664 GPR25O00155 361 aa15.19■□□□□ 0.02
GTF3C1-204ENST00000564664 IL15P40933 162 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-204ENST00000564664 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
GTF3C1-204ENST00000564664 CHAF1AQ13111 956 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-204ENST00000564664 ATG9AQ7Z3C6 839 aa15.19■□□□□ 0.02
GTF3C1-204ENST00000564664 ZNF296Q8WUU4 475 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-204ENST00000564664 WNK4Q96J92 1243 aa15.19■□□□□ 0.02
GTF3C1-204ENST00000564664 GNAI3P08754 354 aa15.18■□□□□ 0.02
GTF3C1-204ENST00000564664 MLLT1Q03111 559 aaPredicted RBP15.18■□□□□ 0.02
GTF3C1-204ENST00000564664 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-204ENST00000564664 FAM83AQ86UY5 434 aa15.18■□□□□ 0.02
GTF3C1-204ENST00000564664 IFNL1Q8IU54 200 aa15.18■□□□□ 0.02
GTF3C1-204ENST00000564664 TEPSINQ96N21 525 aa15.18■□□□□ 0.02
GTF3C1-204ENST00000564664 COPRSQ9NQ92 184 aa15.18■□□□□ 0.02
GTF3C1-204ENST00000564664 TMOD2Q9NZR1 351 aa15.18■□□□□ 0.02
GTF3C1-204ENST00000564664 IQSEC3Q9UPP2 1182 aaPredicted RBP15.18■□□□□ 0.02
GTF3C1-204ENST00000564664 AOX1Q06278 1338 aa15.17■□□□□ 0.02
GTF3C1-204ENST00000564664 SEMA3EO15041 775 aa15.17■□□□□ 0.02
GTF3C1-204ENST00000564664 MAP3K9P80192 1104 aa15.17■□□□□ 0.02
GTF3C1-204ENST00000564664 SSC5DA1L4H1 1573 aa15.16■□□□□ 0.02
GTF3C1-204ENST00000564664 TESPA1A2RU30 521 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-204ENST00000564664 TCP10L2B9ZVM9 353 aa15.16■□□□□ 0.02
GTF3C1-204ENST00000564664 FKTNO75072 461 aa15.16■□□□□ 0.02
GTF3C1-204ENST00000564664 ATP2B3Q16720 1220 aa15.16■□□□□ 0.02
GTF3C1-204ENST00000564664 APOBEC3HQ6NTF7 200 aaKnown RBP15.16■□□□□ 0.02
GTF3C1-204ENST00000564664 CLMNQ96JQ2 1002 aa15.16■□□□□ 0.02
GTF3C1-204ENST00000564664 FZD1Q9UP38 647 aa15.16■□□□□ 0.02
GTF3C1-204ENST00000564664 GRIK5Q16478 980 aa15.15■□□□□ 0.02
GTF3C1-204ENST00000564664 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
GTF3C1-204ENST00000564664 LRRFIP2Q9Y608 721 aaKnown RBP15.15■□□□□ 0.02
GTF3C1-204ENST00000564664 SALL1Q9NSC2 1324 aa15.15■□□□□ 0.02
GTF3C1-204ENST00000564664 MTX1Q13505 466 aa15.14■□□□□ 0.01
GTF3C1-204ENST00000564664 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
GTF3C1-204ENST00000564664 TMEM39BQ9GZU3 492 aa15.14■□□□□ 0.01
GTF3C1-204ENST00000564664 SIL1Q9H173 461 aa15.14■□□□□ 0.01
GTF3C1-204ENST00000564664 AKAP2Q9Y2D5 859 aa15.14■□□□□ 0.01
GTF3C1-204ENST00000564664 CSADQ9Y600 493 aa15.14■□□□□ 0.01
GTF3C1-204ENST00000564664 ARAP2Q8WZ64 1704 aa15.14■□□□□ 0.01
GTF3C1-204ENST00000564664 GTF2A2P52657 109 aa15.13■□□□□ 0.01
GTF3C1-204ENST00000564664 DCAF15Q66K64 600 aa15.13■□□□□ 0.01
GTF3C1-204ENST00000564664 FBXO46Q6PJ61 603 aaPredicted RBP15.13■□□□□ 0.01
GTF3C1-204ENST00000564664 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.13■□□□□ 0.01
GTF3C1-204ENST00000564664 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.13■□□□□ 0.01
GTF3C1-204ENST00000564664 OPTNQ96CV9 577 aa15.13■□□□□ 0.01
GTF3C1-204ENST00000564664 MEIS3Q99687 375 aa15.13■□□□□ 0.01
GTF3C1-204ENST00000564664 IGF2BP3O00425 579 aaKnown RBP eCLIP15.12■□□□□ 0.01
GTF3C1-204ENST00000564664 LDHBP07195 334 aaKnown RBP15.12■□□□□ 0.01
GTF3C1-204ENST00000564664 ATF7IPQ6VMQ6 1270 aa15.12■□□□□ 0.01
GTF3C1-204ENST00000564664 FAM151AQ8WW52 585 aa15.12■□□□□ 0.01
GTF3C1-204ENST00000564664 ELP3Q9H9T3 547 aa15.12■□□□□ 0.01
GTF3C1-204ENST00000564664 HPS5Q9UPZ3 1129 aa15.12■□□□□ 0.01
GTF3C1-204ENST00000564664 SRGAP3O43295 1099 aa15.11■□□□□ 0.01
GTF3C1-204ENST00000564664 GJA5P36382 358 aa15.11■□□□□ 0.01
GTF3C1-204ENST00000564664 SLF2Q8IX21 1173 aa15.11■□□□□ 0.01
GTF3C1-204ENST00000564664 ERO1AQ96HE7 468 aa15.11■□□□□ 0.01
GTF3C1-204ENST00000564664 MS4A4AQ96JQ5 239 aa15.11■□□□□ 0.01
GTF3C1-204ENST00000564664 R3HDMLQ9H3Y0 253 aa15.11■□□□□ 0.01
GTF3C1-204ENST00000564664 PDS5AQ29RF7 1337 aaKnown RBP15.11■□□□□ 0.01
GTF3C1-204ENST00000564664 RPAP1Q9BWH6 1393 aaPredicted RBP15.11■□□□□ 0.01
GTF3C1-204ENST00000564664 WDHD1O75717 1129 aaPredicted RBP15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 GNAI2P04899 355 aa15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 VGLL4Q14135 290 aa15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 ARHGEF6Q15052 776 aa15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 SPTY2D1Q68D10 685 aaPredicted RBP15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 CCDC102BQ68D86 513 aa15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 ERO1BQ86YB8 467 aa15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 PTPN18Q99952 460 aa15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 ZCCHC17Q9NP64 241 aaKnown RBP15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 PA2G4Q9UQ80 394 aaKnown RBP15.1■□□□□ 0.01
GTF3C1-204ENST00000564664 LAMB1P07942 1786 aa15.09■□□□□ 0.01
GTF3C1-204ENST00000564664 SPDYE5A6NIY4 337 aa15.09■□□□□ 0.01
GTF3C1-204ENST00000564664 TRIM27P14373 513 aa15.09■□□□□ 0.01
GTF3C1-204ENST00000564664 PHKA1P46020 1223 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms