RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SRRDQ9UH36 339 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 STXBP5LQ9Y2K9 1186 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 SSUH2Q9Y2M2 353 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 NR2E3Q9Y5X4 410 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 VCANP13611 3396 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 EYSQ5T1H1 3165 aa10.02□□□□□ -0.81
HERPUD1-206ENST00000563343 BTBD19C9JJ37 291 aa10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 SNAP23O00161 211 aa10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 MYO1BO43795 1136 aa10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 IL1R1P14778 569 aa10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 OSBPP22059 807 aa10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 GRK4P32298 578 aa10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 KIF22Q14807 665 aa10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 C15orf52Q6ZUT6 534 aaKnown RBP10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 RIPOR2Q9Y4F9 1068 aa10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 DDX60LQ5H9U9 1706 aaKnown RBP10.01□□□□□ -0.81
HERPUD1-206ENST00000563343 F8W031 263 aaPredicted RBP10□□□□□ -0.81
HERPUD1-206ENST00000563343 FARP2O94887 1054 aaPredicted RBP10□□□□□ -0.81
HERPUD1-206ENST00000563343 BMP8BP34820 402 aa10□□□□□ -0.81
HERPUD1-206ENST00000563343 Q7L0L9 218 aa10□□□□□ -0.81
HERPUD1-206ENST00000563343 DEFB123Q8N688 67 aa10□□□□□ -0.81
HERPUD1-206ENST00000563343 U2AF1L4Q8WU68 220 aaKnown RBP10□□□□□ -0.81
HERPUD1-206ENST00000563343 ANKRD2Q9GZV1 360 aa10□□□□□ -0.81
HERPUD1-206ENST00000563343 MTMR10Q9NXD2 777 aa10□□□□□ -0.81
HERPUD1-206ENST00000563343 ZNF70Q9UC06 446 aaPredicted RBP10□□□□□ -0.81
HERPUD1-206ENST00000563343 LAS1LQ9Y4W2 734 aaKnown RBP10□□□□□ -0.81
HERPUD1-206ENST00000563343 SNCAIPQ9Y6H5 919 aa10□□□□□ -0.81
HERPUD1-206ENST00000563343 LAMA2P24043 3122 aaKnown RBP9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 PHIPQ8WWQ0 1821 aa9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 SPDYE4A6NLX3 237 aa9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 ECM2O94769 699 aaPredicted RBP9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 SGPL1O95470 568 aa9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 CETPP11597 493 aa9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 PSMC4P43686 418 aa9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 CHRNDQ07001 517 aa9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 RNF208Q9H0X6 261 aa9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 TDRD3Q9H7E2 651 aaKnown RBP9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 MYPNQ86TC9 1320 aa9.99□□□□□ -0.81
HERPUD1-206ENST00000563343 AK9Q5TCS8 1911 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 CACNA1FO60840 1977 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 H7C1W4 665 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 IRF6O14896 467 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 ZNF853P0CG23 659 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 ITGA6P23229 1130 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 TNFAIP1Q13829 316 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 NEUROD2Q15784 382 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 ERO1BQ86YB8 467 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 PLA2G12BQ9BX93 195 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 TMEM39BQ9GZU3 492 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 UNC93B1Q9H1C4 597 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 MBIPQ9NS73 344 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 CPA4Q9UI42 421 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 PLXNB2O15031 1838 aa9.98□□□□□ -0.81
HERPUD1-206ENST00000563343 PRUNE2Q8WUY3 3088 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 EVI5O60447 810 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 TAF5LO75529 589 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 CSF1RP07333 972 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 CASP7P55210 303 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 PRKCZQ05513 592 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 PPIL2Q13356 520 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 MOGSQ13724 837 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 LRIT3Q3SXY7 679 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 HELBQ8NG08 1087 aaPredicted RBP9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 RAET1EQ8TD07 263 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 CRISPLD2Q9H0B8 497 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 GABRQQ9UN88 632 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 JAG2Q9Y219 1238 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 MAP3K2Q9Y2U5 619 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 CSADQ9Y600 493 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 FAM205AQ6ZU69 1335 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 MYH13Q9UKX3 1938 aa9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 COL2A1P02458 1487 aaPredicted RBP9.97□□□□□ -0.81
HERPUD1-206ENST00000563343 NEURL1BA8MQ27 555 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 TCP10L2B9ZVM9 353 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 WDHD1O75717 1129 aaPredicted RBP9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 HOXD10P28358 340 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 BCAMP50895 628 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 UBXN2AP68543 259 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 SNAPC2Q13487 334 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 CWF19L2Q2TBE0 894 aaKnown RBP9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 UBE3BQ7Z3V4 1068 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 ANKRD23Q86SG2 305 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 CCDC146Q8IYE0 955 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 DZIP1LQ8IYY4 767 aaKnown RBP9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 ZKSCAN4Q969J2 545 aaPredicted RBP9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 SERPINA10Q9UK55 444 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 FRMPD3Q5JV73 1810 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 DOCK2Q92608 1830 aa9.96□□□□□ -0.82
HERPUD1-206ENST00000563343 PI4KAP2A4QPH2 592 aa9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 FMNL1O95466 1100 aaPredicted RBP9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 BCRP11274 1271 aa9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 CAPN2P17655 700 aa9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 KCNJ4P48050 445 aa9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 RBM5P52756 815 aaKnown RBP eCLIP9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 KSR2Q6VAB6 950 aa9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 PI4KAP1Q8N8J0 262 aa9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms