RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 P2RX7Q99572 595 aaKnown RBP12.91□□□□□ -0.34
SNX29-202ENST00000563308 PTPN18Q99952 460 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 GREM2Q9H772 168 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 SRRDQ9UH36 339 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 GGA1Q9UJY5 639 aa12.91□□□□□ -0.34
SNX29-202ENST00000563308 TESPA1A2RU30 521 aaPredicted RBP12.9□□□□□ -0.34
SNX29-202ENST00000563308 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
SNX29-202ENST00000563308 ANKRD18AQ8IVF6 992 aa12.9□□□□□ -0.34
SNX29-202ENST00000563308 PLA2G12BQ9BX93 195 aa12.9□□□□□ -0.34
SNX29-202ENST00000563308 ARHGAP39Q9C0H5 1083 aa12.9□□□□□ -0.34
SNX29-202ENST00000563308 ANKIB1Q9P2G1 1089 aa12.9□□□□□ -0.34
SNX29-202ENST00000563308 XDHP47989 1333 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 ZNF521Q96K83 1311 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 SCN9AQ15858 1988 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 FKBP5Q13451 457 aaPredicted RBP12.89□□□□□ -0.35
SNX29-202ENST00000563308 MAP3K11Q16584 847 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 SUPT20HL1Q3ZLR7 823 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 LINS1Q8NG48 757 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 MYLIPQ8WY64 445 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
SNX29-202ENST00000563308 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
SNX29-202ENST00000563308 MYPNQ86TC9 1320 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 CCL15-CCL14A0A0B4J2E2 113 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 TLR2O60603 784 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 CSF1RP07333 972 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 GTF2A2P52657 109 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 CCL15Q16663 113 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 ANKRD13AQ8IZ07 590 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 CDC5LQ99459 802 aaKnown RBP12.88□□□□□ -0.35
SNX29-202ENST00000563308 UNC93B1Q9H1C4 597 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 FZD1Q9UP38 647 aa12.88□□□□□ -0.35
SNX29-202ENST00000563308 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 F6X3S4 739 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 WNT10BO00744 389 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 ATP2B4P23634 1241 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 PSMC4P43686 418 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 BEND3Q5T5X7 828 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 DEFB118Q96PH6 123 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 UHRF1Q96T88 793 aaPredicted RBP12.87□□□□□ -0.35
SNX29-202ENST00000563308 GMLQ99445 158 aa12.87□□□□□ -0.35
SNX29-202ENST00000563308 LAMB1P07942 1786 aa12.86□□□□□ -0.35
SNX29-202ENST00000563308 ADAMTS19Q8TE59 1207 aa12.86□□□□□ -0.35
SNX29-202ENST00000563308 OPTNQ96CV9 577 aa12.86□□□□□ -0.35
SNX29-202ENST00000563308 SEMA6BQ9H3T3 888 aa12.86□□□□□ -0.35
SNX29-202ENST00000563308 MYH16Q9H6N6 1097 aa12.86□□□□□ -0.35
SNX29-202ENST00000563308 MED23Q9ULK4 1368 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 SASH1O94885 1247 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 ITGA6P23229 1130 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 MMP14P50281 582 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 CCT4P50991 539 aaKnown RBP12.85□□□□□ -0.35
SNX29-202ENST00000563308 FOXO4P98177 505 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 PODNQ7Z5L7 613 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 TXNRD3Q86VQ6 643 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 FBXW7Q969H0 707 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 LBHD1Q9BQE6 289 aaPredicted RBP12.85□□□□□ -0.35
SNX29-202ENST00000563308 DEFB129Q9H1M3 183 aa12.85□□□□□ -0.35
SNX29-202ENST00000563308 COL1A1P02452 1464 aaPredicted RBP12.85□□□□□ -0.35
SNX29-202ENST00000563308 MYH3P11055 1940 aa12.84□□□□□ -0.35
SNX29-202ENST00000563308 OSBPP22059 807 aa12.84□□□□□ -0.35
SNX29-202ENST00000563308 EPHA10Q5JZY3 1008 aa12.84□□□□□ -0.35
SNX29-202ENST00000563308 ATXN2LQ8WWM7 1075 aaKnown RBP12.84□□□□□ -0.35
SNX29-202ENST00000563308 NBPF3Q9H094 633 aa12.84□□□□□ -0.35
SNX29-202ENST00000563308 ELP3Q9H9T3 547 aa12.84□□□□□ -0.35
SNX29-202ENST00000563308 PPP2R3BQ9Y5P8 575 aa12.84□□□□□ -0.35
SNX29-202ENST00000563308 CACNA1FO60840 1977 aa12.83□□□□□ -0.35
SNX29-202ENST00000563308 KLRK1P26718 216 aa12.83□□□□□ -0.36
SNX29-202ENST00000563308 GJA5P36382 358 aa12.83□□□□□ -0.36
SNX29-202ENST00000563308 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
SNX29-202ENST00000563308 MDM2Q00987 491 aaPredicted RBP12.83□□□□□ -0.36
SNX29-202ENST00000563308 DACT2Q5SW24 774 aa12.83□□□□□ -0.36
SNX29-202ENST00000563308 ANKLE1Q8NAG6 615 aa12.83□□□□□ -0.36
SNX29-202ENST00000563308 BRI3BPQ8WY22 251 aa12.83□□□□□ -0.36
SNX29-202ENST00000563308 MYO3BQ8WXR4 1341 aa12.83□□□□□ -0.36
SNX29-202ENST00000563308 FAM43AQ8N2R8 423 aa12.82□□□□□ -0.36
SNX29-202ENST00000563308 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
SNX29-202ENST00000563308 ZCCHC17Q9NP64 241 aaKnown RBP12.82□□□□□ -0.36
SNX29-202ENST00000563308 LEMD3Q9Y2U8 911 aa12.82□□□□□ -0.36
SNX29-202ENST00000563308 PSME4Q14997 1843 aa12.82□□□□□ -0.36
SNX29-202ENST00000563308 ZNF804BA4D1E1 1349 aa12.82□□□□□ -0.36
SNX29-202ENST00000563308 ALPK3Q96L96 1907 aa12.82□□□□□ -0.36
SNX29-202ENST00000563308 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 SNAP23O00161 211 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 MYO1BO43795 1136 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 MRE11P49959 708 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 FCGRTP55899 365 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 CHRNDQ07001 517 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 ANKRD2Q9GZV1 360 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 C11orf49Q9H6J7 331 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 ZSWIM8A7E2V4 1837 aa12.81□□□□□ -0.36
SNX29-202ENST00000563308 ANKRD18BA2A2Z9 1011 aa12.8□□□□□ -0.36
SNX29-202ENST00000563308 GRM8O00222 908 aa12.8□□□□□ -0.36
SNX29-202ENST00000563308 ADCY3O60266 1144 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1276 ms