RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 COL19A1Q14993 1142 aa5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 EXOSC6Q5RKV6 272 aaKnown RBP5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 INTS5Q6P9B9 1019 aaKnown RBP5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 GALNT12Q8IXK2 581 aa5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 C12orf50Q8NA57 414 aaPredicted RBP5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 USP26Q9BXU7 913 aa5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 CYP4F12Q9HCS2 524 aa5.7□□□□□ -1.5
SHCBP1-202ENST00000563219 A0A096LPE4 126 aa5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 A0A1W2PP55 124 aa5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 A0A1W2PPZ6 126 aa5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 METTL12A8MUP2 240 aa5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 TIAF1O95411 115 aa5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 MAP4P27816 1152 aaKnown RBP5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 GRIK1P39086 918 aa5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 GSTM4Q03013 218 aa5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 NPAS4Q8IUM7 802 aa5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 CCNJLQ8IV13 435 aa5.69□□□□□ -1.5
SHCBP1-202ENST00000563219 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
SHCBP1-202ENST00000563219 ANKRD33BA6NCL7 494 aa5.68□□□□□ -1.5
SHCBP1-202ENST00000563219 GAS2O43903 313 aaKnown RBP5.68□□□□□ -1.5
SHCBP1-202ENST00000563219 NEFLP07196 543 aa5.68□□□□□ -1.5
SHCBP1-202ENST00000563219 FMR1Q06787 632 aaKnown RBP eCLIP5.68□□□□□ -1.5
SHCBP1-202ENST00000563219 ZNF423Q2M1K9 1284 aa5.68□□□□□ -1.5
SHCBP1-202ENST00000563219 SHKBP1Q8TBC3 707 aa5.68□□□□□ -1.5
SHCBP1-202ENST00000563219 TMC1Q8TDI8 760 aa5.68□□□□□ -1.5
SHCBP1-202ENST00000563219 TCF12Q99081 682 aa5.68□□□□□ -1.5
SHCBP1-202ENST00000563219 DRD2P14416 443 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 SPINK2P20155 84 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 GRIA4P48058 902 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 PCDH1Q08174 1060 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 SPRED3Q2MJR0 410 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 SGO2Q562F6 1265 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 KIAA0319Q5VV43 1072 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 DTX1Q86Y01 620 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 RGS22Q8NE09 1264 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 MFSD14AQ96MC6 490 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 NRSN2Q9GZP1 204 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 CLEC4MQ9H2X3 399 aaPredicted RBP5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 LIN7BQ9HAP6 207 aa5.67□□□□□ -1.5
SHCBP1-202ENST00000563219 COL17A1Q9UMD9 1497 aaPredicted RBP5.66□□□□□ -1.5
SHCBP1-202ENST00000563219 WDR64B1ANS9 1081 aa5.66□□□□□ -1.5
SHCBP1-202ENST00000563219 ADAMTS4O75173 837 aa5.66□□□□□ -1.5
SHCBP1-202ENST00000563219 GP2P55259 537 aaKnown RBP5.66□□□□□ -1.5
SHCBP1-202ENST00000563219 PLCB3Q01970 1234 aa5.66□□□□□ -1.5
SHCBP1-202ENST00000563219 SOX4Q06945 474 aaPredicted RBP5.66□□□□□ -1.5
SHCBP1-202ENST00000563219 USPL1Q5W0Q7 1092 aa5.66□□□□□ -1.5
SHCBP1-202ENST00000563219 NIF3L1Q9GZT8 377 aa5.66□□□□□ -1.5
SHCBP1-202ENST00000563219 DNAJC25Q9H1X3 360 aa5.66□□□□□ -1.5
SHCBP1-202ENST00000563219 FAM95CA0A1B0GW59 222 aa5.65□□□□□ -1.5
SHCBP1-202ENST00000563219 CYP11A1P05108 521 aa5.65□□□□□ -1.5
SHCBP1-202ENST00000563219 RXRBP28702 533 aa5.65□□□□□ -1.5
SHCBP1-202ENST00000563219 USP11P51784 963 aa5.65□□□□□ -1.5
SHCBP1-202ENST00000563219 MCTP1Q6DN14 999 aa5.65□□□□□ -1.5
SHCBP1-202ENST00000563219 CDPF1Q6NVV7 123 aa5.65□□□□□ -1.5
SHCBP1-202ENST00000563219 C2CD4AQ8NCU7 369 aaPredicted RBP5.65□□□□□ -1.5
SHCBP1-202ENST00000563219 GIMAP7Q8NHV1 300 aa5.65□□□□□ -1.5
SHCBP1-202ENST00000563219 OAS3Q9Y6K5 1087 aaKnown RBP5.65□□□□□ -1.5
SHCBP1-202ENST00000563219 EIF1AYO14602 144 aaKnown RBP5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 P4HBP07237 508 aaKnown RBP5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 MAOBP27338 520 aa5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 ORC1Q13415 861 aa5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 NFKBIBQ15653 356 aa5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 ENOX2Q16206 610 aaKnown RBP5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 FBXO33Q7Z6M2 555 aa5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 FBLIM1Q8WUP2 373 aa5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 EZH1Q92800 747 aaPredicted RBP5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 CSRNP1Q96S65 589 aa5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 ZFYVE1Q9HBF4 777 aa5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 ATG3Q9NT62 314 aa5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 PIM2Q9P1W9 311 aa5.64□□□□□ -1.51
SHCBP1-202ENST00000563219 CPNE3O75131 537 aaKnown RBP5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 WNT11O96014 354 aa5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 F13BP05160 661 aa5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 ITPKAP23677 461 aa5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 HOXA10P31260 410 aaPredicted RBP5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 POU4F3Q15319 338 aa5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 PAOXQ6QHF9 649 aa5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 FBXL6Q8N531 539 aa5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 DDX54Q8TDD1 881 aaKnown RBP5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 EHD4Q9H223 541 aa5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 LEMD3Q9Y2U8 911 aa5.63□□□□□ -1.51
SHCBP1-202ENST00000563219 B3GALT4O96024 378 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 CTSBP07858 339 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 ADH5P11766 374 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 RANGAP1P46060 587 aaPredicted RBP5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 IRAK1P51617 712 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 PTPN12Q05209 780 aaKnown RBP5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 CPSF6Q16630 551 aaKnown RBP eCLIP5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 EAPPQ56P03 285 aaPredicted RBP5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 HP1BP3Q5SSJ5 553 aaPredicted RBP5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 SHISA5Q8N114 240 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 FBF1Q8TES7 1133 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 TRIM56Q9BRZ2 755 aaKnown RBP5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 YIPF2Q9BWQ6 316 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 OSBPL1AQ9BXW6 950 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 ZNF576Q9H609 170 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 NPHS2Q9NP85 383 aa5.62□□□□□ -1.51
SHCBP1-202ENST00000563219 PNMA6FA0A0J9YX94 578 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 FOSL1P15407 271 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 MAPK8P45983 427 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms