RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 CAMTA1Q9Y6Y1 1673 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 SPHKAPQ2M3C7 1700 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 SIN3BO75182 1162 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 CTBSQ01459 385 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 MAP3K10Q02779 954 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 RASSF7Q02833 373 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 DNM1Q05193 864 aaKnown RBP8.44□□□□□ -1.06
UBR1-203ENST00000562173 GOLGA6L1Q8N7Z2 621 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 TTC16Q8NEE8 873 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 PRR12Q9ULL5 1215 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 KANK1Q14678 1352 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 C1orf167Q5SNV9 1468 aa8.44□□□□□ -1.06
UBR1-203ENST00000562173 PLCH1Q4KWH8 1693 aa8.43□□□□□ -1.06
UBR1-203ENST00000562173 ABCA3Q99758 1704 aa8.43□□□□□ -1.06
UBR1-203ENST00000562173 RNF225M0QZC1 329 aaPredicted RBP8.43□□□□□ -1.06
UBR1-203ENST00000562173 BCRP11274 1271 aa8.43□□□□□ -1.06
UBR1-203ENST00000562173 HOXD8P13378 290 aaPredicted RBP8.43□□□□□ -1.06
UBR1-203ENST00000562173 XKR5Q6UX68 686 aa8.43□□□□□ -1.06
UBR1-203ENST00000562173 CMTR1Q8N1G2 835 aaKnown RBP8.43□□□□□ -1.06
UBR1-203ENST00000562173 PNMA5Q96PV4 448 aa8.43□□□□□ -1.06
UBR1-203ENST00000562173 FAM129BQ96TA1 746 aa8.43□□□□□ -1.06
UBR1-203ENST00000562173 POLIQ9UNA4 740 aa8.43□□□□□ -1.06
UBR1-203ENST00000562173 ADGRL3Q9HAR2 1447 aa8.43□□□□□ -1.06
UBR1-203ENST00000562173 C2CD2LO14523 706 aa8.42□□□□□ -1.06
UBR1-203ENST00000562173 SOX18P35713 384 aa8.42□□□□□ -1.06
UBR1-203ENST00000562173 NLRP13Q86W25 1043 aa8.42□□□□□ -1.06
UBR1-203ENST00000562173 DMRTB1Q96MA1 342 aa8.42□□□□□ -1.06
UBR1-203ENST00000562173 SLC30A3Q99726 388 aa8.42□□□□□ -1.06
UBR1-203ENST00000562173 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
UBR1-203ENST00000562173 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.42□□□□□ -1.06
UBR1-203ENST00000562173 NEXMIFQ5QGS0 1516 aa8.42□□□□□ -1.06
UBR1-203ENST00000562173 IQGAP3Q86VI3 1631 aa8.42□□□□□ -1.06
UBR1-203ENST00000562173 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.41□□□□□ -1.06
UBR1-203ENST00000562173 MYOM2P54296 1465 aa8.41□□□□□ -1.06
UBR1-203ENST00000562173 RALGAPBQ86X10 1494 aa8.41□□□□□ -1.06
UBR1-203ENST00000562173 ROBO2Q9HCK4 1378 aa8.41□□□□□ -1.06
UBR1-203ENST00000562173 MARSP56192 900 aaKnown RBP8.41□□□□□ -1.06
UBR1-203ENST00000562173 PCSK7Q16549 785 aa8.41□□□□□ -1.06
UBR1-203ENST00000562173 TNFRSF25Q93038 417 aa8.41□□□□□ -1.06
UBR1-203ENST00000562173 GZF1Q9H116 711 aaPredicted RBP8.41□□□□□ -1.06
UBR1-203ENST00000562173 CCDC87Q9NVE4 849 aa8.41□□□□□ -1.06
UBR1-203ENST00000562173 TNS1Q9HBL0 1735 aaKnown RBP8.4□□□□□ -1.06
UBR1-203ENST00000562173 ADGRL2O95490 1459 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 GDF11O95390 407 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 NFKB1P19838 968 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 MAPK1P28482 360 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 IRS1P35568 1242 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 SYT9Q86SS6 491 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 ZSCAN29Q8IWY8 852 aaPredicted RBP8.4□□□□□ -1.06
UBR1-203ENST00000562173 TMEM151AQ8N4L1 468 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 SNX29Q8TEQ0 813 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 ALKBH8Q96BT7 664 aaKnown RBP8.4□□□□□ -1.06
UBR1-203ENST00000562173 ASB16Q96NS5 453 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 USP20Q9Y2K6 914 aa8.4□□□□□ -1.06
UBR1-203ENST00000562173 PXDNQ92626 1479 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 ANKRD50Q9ULJ7 1429 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 NCOA3Q9Y6Q9 1424 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 ANKRD30AQ9BXX3 1397 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 OIP5O43482 229 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 NEFLP07196 543 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 RARAP10276 462 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 TMCO4Q5TGY1 634 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 ZNF438Q7Z4V0 828 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 BHMTQ93088 406 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 LRRC59Q96AG4 307 aaKnown RBP8.39□□□□□ -1.07
UBR1-203ENST00000562173 MDFIQ99750 246 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 SLC52A1Q9NWF4 448 aa8.39□□□□□ -1.07
UBR1-203ENST00000562173 ABI2Q9NYB9 513 aaPredicted RBP8.39□□□□□ -1.07
UBR1-203ENST00000562173 NRAPQ86VF7 1730 aa8.38□□□□□ -1.07
UBR1-203ENST00000562173 ERCC3P19447 782 aa8.38□□□□□ -1.07
UBR1-203ENST00000562173 FAM50AQ14320 339 aaKnown RBP8.38□□□□□ -1.07
UBR1-203ENST00000562173 GRIN2CQ14957 1233 aa8.38□□□□□ -1.07
UBR1-203ENST00000562173 C1orf229Q6ZS94 237 aaPredicted RBP8.38□□□□□ -1.07
UBR1-203ENST00000562173 SCARF2Q96GP6 870 aaPredicted RBP8.38□□□□□ -1.07
UBR1-203ENST00000562173 ENAMQ9NRM1 1142 aa8.38□□□□□ -1.07
UBR1-203ENST00000562173 TRPC5Q9UL62 973 aaPredicted RBP8.38□□□□□ -1.07
UBR1-203ENST00000562173 RPRD2Q5VT52 1461 aaKnown RBP8.38□□□□□ -1.07
UBR1-203ENST00000562173 DCCP43146 1447 aa8.37□□□□□ -1.07
UBR1-203ENST00000562173 USP32Q8NFA0 1604 aa8.37□□□□□ -1.07
UBR1-203ENST00000562173 IGHA2P01877 340 aa8.37□□□□□ -1.07
UBR1-203ENST00000562173 NRLP54845 237 aa8.37□□□□□ -1.07
UBR1-203ENST00000562173 GPLD1P80108 840 aa8.37□□□□□ -1.07
UBR1-203ENST00000562173 C8orf34Q49A92 452 aa8.37□□□□□ -1.07
UBR1-203ENST00000562173 ELP3Q9H9T3 547 aa8.37□□□□□ -1.07
UBR1-203ENST00000562173 TLR7Q9NYK1 1049 aaKnown RBP8.37□□□□□ -1.07
UBR1-203ENST00000562173 GGA1Q9UJY5 639 aa8.37□□□□□ -1.07
UBR1-203ENST00000562173 KIF1BO60333 1816 aa8.37□□□□□ -1.07
UBR1-203ENST00000562173 PLEKHH1Q9ULM0 1364 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 CNTNAP5Q8WYK1 1306 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 PPLO60437 1756 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 SHISA8B8ZZ34 492 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 SASH3O75995 380 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 PSAPP07602 524 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 EPXP11678 715 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 PCBP4P57723 403 aaKnown RBP8.36□□□□□ -1.07
UBR1-203ENST00000562173 PLAURQ03405 335 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 TRIM26Q12899 539 aaPredicted RBP8.36□□□□□ -1.07
UBR1-203ENST00000562173 COL19A1Q14993 1142 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms