RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SALL3Q9BXA9 1300 aa11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 WNT10BO00744 389 aa11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 LDHBP07195 334 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 TBC1D10BQ4KMP7 808 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 ERICH6BQ5W0A0 696 aa11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 CHADLQ6NUI6 762 aa11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 SMC1BQ8NDV3 1235 aa11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 TTC41PQ6P2S7 1318 aa11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.53
RABGGTA-221ENST00000561055 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 PRDX5P30044 214 aa11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 ZAP70P43403 619 aa11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 NUCB1Q02818 461 aa11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 EAPPQ56P03 285 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 ANKRD45Q5TZF3 282 aa11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 TMED8Q6PL24 325 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 ZDHHC15Q96MV8 337 aa11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 ECHDC1Q9NTX5 307 aa11.76□□□□□ -0.53
RABGGTA-221ENST00000561055 SPDYE2BA6NHP3 402 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 F8W031 263 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 ITGBL1O95965 494 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 SPDYE6P0CI01 402 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 CRKP46108 304 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 NBPF9Q3BBW0 867 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 CFAP100Q494V2 611 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 ERICH6Q7L0X2 663 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 PRMT6Q96LA8 375 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 HAUS7Q99871 368 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 STAP2Q9UGK3 403 aa11.75□□□□□ -0.53
RABGGTA-221ENST00000561055 NEFLP07196 543 aa11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 RBM26Q5T8P6 1007 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 CHD1LQ86WJ1 897 aa11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 CNTROBQ8N137 903 aa11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 ZNF384Q8TF68 577 aa11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 NSUN4Q96CB9 384 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 GPATCH3Q96I76 525 aa11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 ABCF2Q9UG63 623 aa11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 GAKO14976 1311 aa11.74□□□□□ -0.53
RABGGTA-221ENST00000561055 MYH1P12882 1939 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 MECOMQ03112 1051 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 FKBP1CQ5VVH2 108 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 CDC37L1Q7L3B6 337 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 DCPSQ96C86 337 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 PASKQ96RG2 1323 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 OSBPL3Q9H4L5 887 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 ANTXR1Q9H6X2 564 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 PIH1D3Q9NQM4 214 aaKnown RBP11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 LRP2BPQ9P2M1 347 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
RABGGTA-221ENST00000561055 ASTN2O75129 1339 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 AOX1Q06278 1338 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 GPR75-ASB3A0A0A6YYF3 556 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 ERC2O15083 957 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 MYO1BO43795 1136 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 GLRX3O76003 335 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 MAP4K4O95819 1239 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 LDHCP07864 332 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 MX1P20591 662 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 PDE1AP54750 535 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 GSTO1P78417 241 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 SPDYE2Q495Y8 402 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 MAP1SQ66K74 1059 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 DZIP1Q86YF9 867 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 OTUD7AQ8TE49 926 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 LNPKQ9C0E8 428 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 BOLA2Q9H3K6 86 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 PAG1Q9NWQ8 432 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 GGA3Q9NZ52 723 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 DAGLAQ9Y4D2 1042 aa11.72□□□□□ -0.53
RABGGTA-221ENST00000561055 MROH7-TTC4A0A0A0MT08 1334 aa11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 RBM5P52756 815 aaKnown RBP eCLIP11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 MAP3K12Q12852 859 aa11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 ANGEL2Q5VTE6 544 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 TDRD3Q9H7E2 651 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 RAI14Q9P0K7 980 aa11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 ZNF70Q9UC06 446 aaPredicted RBP11.71□□□□□ -0.53
RABGGTA-221ENST00000561055 PPP4CP60510 307 aa11.7□□□□□ -0.54
RABGGTA-221ENST00000561055 CENPQQ7L2Z9 268 aaPredicted RBP11.7□□□□□ -0.54
RABGGTA-221ENST00000561055 KRT26Q7Z3Y9 468 aa11.7□□□□□ -0.54
RABGGTA-221ENST00000561055 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
RABGGTA-221ENST00000561055 SULF1Q8IWU6 871 aa11.7□□□□□ -0.54
RABGGTA-221ENST00000561055 GLIS2Q9BZE0 524 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms