RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 CAVIN4Q5BKX8 364 aa22.41■■□□□ 1.18
RPL28-210ENST00000560583 ATG9AQ7Z3C6 839 aa22.41■■□□□ 1.18
RPL28-210ENST00000560583 CFHR5Q9BXR6 569 aa22.41■■□□□ 1.18
RPL28-210ENST00000560583 NOB1Q9ULX3 412 aaKnown RBP22.41■■□□□ 1.18
RPL28-210ENST00000560583 USP2O75604 605 aaPredicted RBP22.4■■□□□ 1.18
RPL28-210ENST00000560583 GJA5P36382 358 aa22.4■■□□□ 1.18
RPL28-210ENST00000560583 NOM1Q5C9Z4 860 aaKnown RBP22.4■■□□□ 1.18
RPL28-210ENST00000560583 GPR25O00155 361 aa22.39■■□□□ 1.17
RPL28-210ENST00000560583 ZBTB48P10074 688 aaPredicted RBP22.39■■□□□ 1.17
RPL28-210ENST00000560583 TNFAIP1Q13829 316 aa22.39■■□□□ 1.17
RPL28-210ENST00000560583 TBC1D22AQ8WUA7 517 aa22.39■■□□□ 1.17
RPL28-210ENST00000560583 SLC10A4Q96EP9 437 aa22.39■■□□□ 1.17
RPL28-210ENST00000560583 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.39■■□□□ 1.17
RPL28-210ENST00000560583 UNCXA6NJT0 531 aa22.38■■□□□ 1.17
RPL28-210ENST00000560583 TCP10L2B9ZVM9 353 aa22.38■■□□□ 1.17
RPL28-210ENST00000560583 UBTFL1P0CB47 393 aaPredicted RBP22.38■■□□□ 1.17
RPL28-210ENST00000560583 HDLBPQ00341 1268 aaKnown RBP22.38■■□□□ 1.17
RPL28-210ENST00000560583 TMEM39BQ9GZU3 492 aa22.38■■□□□ 1.17
RPL28-210ENST00000560583 TNRC18O15417 2968 aaPredicted RBP22.37■■□□□ 1.17
RPL28-210ENST00000560583 MANSC4A6NHS7 340 aaPredicted RBP22.37■■□□□ 1.17
RPL28-210ENST00000560583 IGF2BP3O00425 579 aaKnown RBP eCLIP22.37■■□□□ 1.17
RPL28-210ENST00000560583 FRAT2O75474 233 aaPredicted RBP22.37■■□□□ 1.17
RPL28-210ENST00000560583 IFIT1P09914 478 aaKnown RBP22.37■■□□□ 1.17
RPL28-210ENST00000560583 IREB2P48200 963 aaKnown RBP22.37■■□□□ 1.17
RPL28-210ENST00000560583 RARSP54136 660 aaKnown RBP22.37■■□□□ 1.17
RPL28-210ENST00000560583 MLLT1Q03111 559 aaPredicted RBP22.37■■□□□ 1.17
RPL28-210ENST00000560583 CACNB3P54284 484 aa22.36■■□□□ 1.17
RPL28-210ENST00000560583 DIEXFQ68CQ4 756 aaKnown RBP22.36■■□□□ 1.17
RPL28-210ENST00000560583 IFNL1Q8IU54 200 aa22.36■■□□□ 1.17
RPL28-210ENST00000560583 ANKRD13AQ8IZ07 590 aa22.36■■□□□ 1.17
RPL28-210ENST00000560583 LPIN2Q92539 896 aa22.36■■□□□ 1.17
RPL28-210ENST00000560583 TEKT1Q969V4 418 aa22.36■■□□□ 1.17
RPL28-210ENST00000560583 MEIS3Q99687 375 aa22.36■■□□□ 1.17
RPL28-210ENST00000560583 API5Q9BZZ5 524 aaKnown RBP22.36■■□□□ 1.17
RPL28-210ENST00000560583 SIL1Q9H173 461 aa22.36■■□□□ 1.17
RPL28-210ENST00000560583 LRRFIP2Q9Y608 721 aaKnown RBP22.36■■□□□ 1.17
RPL28-210ENST00000560583 CIAO1O76071 339 aa22.35■■□□□ 1.17
RPL28-210ENST00000560583 SLC5A1P13866 664 aa22.35■■□□□ 1.17
RPL28-210ENST00000560583 ZDHHC15Q96MV8 337 aa22.35■■□□□ 1.17
RPL28-210ENST00000560583 SOX10P56693 466 aa22.34■■□□□ 1.17
RPL28-210ENST00000560583 APOBEC3HQ6NTF7 200 aaKnown RBP22.34■■□□□ 1.17
RPL28-210ENST00000560583 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.34■■□□□ 1.17
RPL28-210ENST00000560583 ELP3Q9H9T3 547 aa22.34■■□□□ 1.17
RPL28-210ENST00000560583 HPS5Q9UPZ3 1129 aa22.34■■□□□ 1.17
RPL28-210ENST00000560583 ALDH1A1P00352 501 aa22.33■■□□□ 1.17
RPL28-210ENST00000560583 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.33■■□□□ 1.172e-9■□□□□ 9.3
RPL28-210ENST00000560583 CNKSR2Q8WXI2 1034 aa22.33■■□□□ 1.17
RPL28-210ENST00000560583 FBXO3Q9UK99 471 aa22.33■■□□□ 1.17
RPL28-210ENST00000560583 PA2G4Q9UQ80 394 aaKnown RBP22.33■■□□□ 1.17
RPL28-210ENST00000560583 SUGT1Q9Y2Z0 365 aa22.33■■□□□ 1.17
RPL28-210ENST00000560583 MAST3O60307 1309 aa22.32■■□□□ 1.16
RPL28-210ENST00000560583 HTTP42858 3142 aa22.32■■□□□ 1.16
RPL28-210ENST00000560583 FKTNO75072 461 aa22.32■■□□□ 1.16
RPL28-210ENST00000560583 TNNI2P48788 182 aa22.32■■□□□ 1.16
RPL28-210ENST00000560583 INHBEP58166 350 aa22.32■■□□□ 1.16
RPL28-210ENST00000560583 ATP2B3Q16720 1220 aa22.32■■□□□ 1.16
RPL28-210ENST00000560583 MRIQ9BWK5 157 aa22.32■■□□□ 1.16
RPL28-210ENST00000560583 RPAP1Q9BWH6 1393 aaPredicted RBP22.32■■□□□ 1.16
RPL28-210ENST00000560583 VGLL4Q14135 290 aa22.31■■□□□ 1.16
RPL28-210ENST00000560583 OPTNQ96CV9 577 aa22.31■■□□□ 1.16
RPL28-210ENST00000560583 PTPN18Q99952 460 aa22.31■■□□□ 1.16
RPL28-210ENST00000560583 TESPA1A2RU30 521 aaPredicted RBP22.3■■□□□ 1.16
RPL28-210ENST00000560583 PKN2Q16513 984 aaKnown RBP22.3■■□□□ 1.16
RPL28-210ENST00000560583 INTS3Q68E01 1043 aaKnown RBP22.3■■□□□ 1.16
RPL28-210ENST00000560583 HHIPL2Q6UWX4 724 aa22.3■■□□□ 1.16
RPL28-210ENST00000560583 WDR66Q8TBY9 1149 aa22.3■■□□□ 1.16
RPL28-210ENST00000560583 COPRSQ9NQ92 184 aa22.3■■□□□ 1.16
RPL28-210ENST00000560583 TNNQ9UQP3 1299 aa22.3■■□□□ 1.16
RPL28-210ENST00000560583 MYH2Q9UKX2 1941 aa22.29■■□□□ 1.16
RPL28-210ENST00000560583 DOCK2Q92608 1830 aa22.29■■□□□ 1.16
RPL28-210ENST00000560583 PRDX5P30044 214 aa22.29■■□□□ 1.16
RPL28-210ENST00000560583 IL15P40933 162 aaPredicted RBP22.29■■□□□ 1.16
RPL28-210ENST00000560583 FKBP1CQ5VVH2 108 aa22.29■■□□□ 1.16
RPL28-210ENST00000560583 FAM83AQ86UY5 434 aa22.29■■□□□ 1.16
RPL28-210ENST00000560583 ARHGAP45Q92619 1136 aa22.29■■□□□ 1.16
RPL28-210ENST00000560583 MS4A4AQ96JQ5 239 aa22.29■■□□□ 1.16
RPL28-210ENST00000560583 CEP126Q9P2H0 1117 aa22.29■■□□□ 1.16
RPL28-210ENST00000560583 DAGLAQ9Y4D2 1042 aa22.29■■□□□ 1.16
RPL28-210ENST00000560583 ADORA1P30542 326 aa22.28■■□□□ 1.16
RPL28-210ENST00000560583 PHKA1P46020 1223 aa22.28■■□□□ 1.16
RPL28-210ENST00000560583 CRHR2Q13324 411 aa22.28■■□□□ 1.16
RPL28-210ENST00000560583 DIXDC1Q155Q3 683 aa22.28■■□□□ 1.16
RPL28-210ENST00000560583 FBXO46Q6PJ61 603 aaPredicted RBP22.28■■□□□ 1.16
RPL28-210ENST00000560583 TMOD2Q9NZR1 351 aa22.28■■□□□ 1.16
RPL28-210ENST00000560583 MAP3K9P80192 1104 aa22.27■■□□□ 1.16
RPL28-210ENST00000560583 BRI3BPQ8WY22 251 aa22.27■■□□□ 1.16
RPL28-210ENST00000560583 SNCAIPQ9Y6H5 919 aa22.27■■□□□ 1.16
RPL28-210ENST00000560583 SALL1Q9NSC2 1324 aa22.27■■□□□ 1.16
RPL28-210ENST00000560583 TRIM27P14373 513 aa22.26■■□□□ 1.15
RPL28-210ENST00000560583 MTX1Q13505 466 aa22.26■■□□□ 1.15
RPL28-210ENST00000560583 ZSWIM8A7E2V4 1837 aa22.26■■□□□ 1.15
RPL28-210ENST00000560583 AK9Q5TCS8 1911 aa22.25■■□□□ 1.15
RPL28-210ENST00000560583 PDE4DIPQ5VU43 2346 aa22.25■■□□□ 1.15
RPL28-210ENST00000560583 CAP1Q01518 475 aa22.25■■□□□ 1.15
RPL28-210ENST00000560583 OTUD5Q96G74 571 aa22.25■■□□□ 1.15
RPL28-210ENST00000560583 HDAC5Q9UQL6 1122 aa22.25■■□□□ 1.15
RPL28-210ENST00000560583 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.25■■□□□ 1.15
RPL28-210ENST00000560583 RBBP6Q7Z6E9 1792 aaKnown RBP22.25■■□□□ 1.15
RPL28-210ENST00000560583 SPDYE5A6NIY4 337 aa22.24■■□□□ 1.15
RPL28-210ENST00000560583 ZBTB22O15209 634 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms