RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 PRAMEF18Q5VWM3 479 aa18.36■□□□□ 0.53
IDH3A-219ENST00000560414 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
IDH3A-219ENST00000560414 FBXO33Q7Z6M2 555 aa18.36■□□□□ 0.53
IDH3A-219ENST00000560414 PITPNM2Q9BZ72 1349 aa18.36■□□□□ 0.53
IDH3A-219ENST00000560414 BMP2KQ9NSY1 1161 aaPredicted RBP18.36■□□□□ 0.53
IDH3A-219ENST00000560414 IQSEC3Q9UPP2 1182 aaPredicted RBP18.36■□□□□ 0.53
IDH3A-219ENST00000560414 PCDHAC2Q9Y5I4 1007 aa18.36■□□□□ 0.53
IDH3A-219ENST00000560414 MMP14P50281 582 aa18.35■□□□□ 0.53
IDH3A-219ENST00000560414 ATG9AQ7Z3C6 839 aa18.35■□□□□ 0.53
IDH3A-219ENST00000560414 VPS37DQ86XT2 251 aa18.35■□□□□ 0.53
IDH3A-219ENST00000560414 C2orf69Q8N8R5 385 aa18.35■□□□□ 0.53
IDH3A-219ENST00000560414 ZBED3Q96IU2 234 aaPredicted RBP18.35■□□□□ 0.53
IDH3A-219ENST00000560414 WBP1LQ9NX94 342 aa18.35■□□□□ 0.53
IDH3A-219ENST00000560414 PA2G4Q9UQ80 394 aaKnown RBP18.35■□□□□ 0.53
IDH3A-219ENST00000560414 FAM205AQ6ZU69 1335 aa18.34■□□□□ 0.53
IDH3A-219ENST00000560414 GABBR2O75899 941 aa18.34■□□□□ 0.53
IDH3A-219ENST00000560414 FGFR2P21802 821 aa18.34■□□□□ 0.53
IDH3A-219ENST00000560414 BCAMP50895 628 aa18.34■□□□□ 0.53
IDH3A-219ENST00000560414 FKBP1AP62942 108 aaKnown RBP18.34■□□□□ 0.53
IDH3A-219ENST00000560414 HHIPL1Q96JK4 782 aa18.34■□□□□ 0.53
IDH3A-219ENST00000560414 MFRPQ9BY79 579 aa18.34■□□□□ 0.53
IDH3A-219ENST00000560414 HDAC5Q9UQL6 1122 aa18.34■□□□□ 0.53
IDH3A-219ENST00000560414 GNAI3P08754 354 aa18.33■□□□□ 0.52
IDH3A-219ENST00000560414 PUM3Q15397 648 aaKnown RBP18.33■□□□□ 0.52
IDH3A-219ENST00000560414 DLGAP5Q15398 846 aa18.33■□□□□ 0.52
IDH3A-219ENST00000560414 CAVIN4Q5BKX8 364 aa18.33■□□□□ 0.52
IDH3A-219ENST00000560414 MFSD14BQ5SR56 506 aa18.33■□□□□ 0.52
IDH3A-219ENST00000560414 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.52
IDH3A-219ENST00000560414 AIDAQ96BJ3 306 aa18.33■□□□□ 0.52
IDH3A-219ENST00000560414 IFIT1P09914 478 aaKnown RBP18.32■□□□□ 0.52
IDH3A-219ENST00000560414 MAP2K1Q02750 393 aaPredicted RBP18.32■□□□□ 0.52
IDH3A-219ENST00000560414 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
IDH3A-219ENST00000560414 CFAP100Q494V2 611 aa18.32■□□□□ 0.52
IDH3A-219ENST00000560414 TMEM57Q8N5G2 664 aa18.32■□□□□ 0.52
IDH3A-219ENST00000560414 TSHZ2Q9NRE2 1034 aa18.32■□□□□ 0.52
IDH3A-219ENST00000560414 AOX1Q06278 1338 aa18.31■□□□□ 0.52
IDH3A-219ENST00000560414 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
IDH3A-219ENST00000560414 CIAO1O76071 339 aa18.31■□□□□ 0.52
IDH3A-219ENST00000560414 GRIK5Q16478 980 aa18.31■□□□□ 0.52
IDH3A-219ENST00000560414 MOB2Q70IA6 237 aa18.31■□□□□ 0.52
IDH3A-219ENST00000560414 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
IDH3A-219ENST00000560414 ZIC5Q96T25 663 aa18.31■□□□□ 0.52
IDH3A-219ENST00000560414 SRGAP3O43295 1099 aa18.3■□□□□ 0.52
IDH3A-219ENST00000560414 SLC5A1P13866 664 aa18.3■□□□□ 0.52
IDH3A-219ENST00000560414 MAP2K2P36507 400 aa18.3■□□□□ 0.52
IDH3A-219ENST00000560414 RBM5P52756 815 aaKnown RBP eCLIP18.3■□□□□ 0.52
IDH3A-219ENST00000560414 RGMBQ6NW40 437 aa18.3■□□□□ 0.52
IDH3A-219ENST00000560414 MTMR14Q8NCE2 650 aa18.3■□□□□ 0.52
IDH3A-219ENST00000560414 LPIN2Q92539 896 aa18.3■□□□□ 0.52
IDH3A-219ENST00000560414 COPRSQ9NQ92 184 aa18.3■□□□□ 0.52
IDH3A-219ENST00000560414 CEP126Q9P2H0 1117 aa18.3■□□□□ 0.52
IDH3A-219ENST00000560414 TTF2Q9UNY4 1162 aaKnown RBP18.3■□□□□ 0.52
IDH3A-219ENST00000560414 CLRN2A0PK11 232 aa18.29■□□□□ 0.52
IDH3A-219ENST00000560414 IL15P40933 162 aaPredicted RBP18.29■□□□□ 0.52
IDH3A-219ENST00000560414 ZNF157P51786 506 aaPredicted RBP18.29■□□□□ 0.52
IDH3A-219ENST00000560414 MKRN3Q13064 507 aaKnown RBP18.29■□□□□ 0.52
IDH3A-219ENST00000560414 APOBEC3FQ8IUX4 373 aaKnown RBP18.29■□□□□ 0.52
IDH3A-219ENST00000560414 FAM155AB1AL88 458 aaPredicted RBP18.28■□□□□ 0.52
IDH3A-219ENST00000560414 GNAI2P04899 355 aa18.28■□□□□ 0.52
IDH3A-219ENST00000560414 CTCFP49711 727 aaPredicted RBP18.28■□□□□ 0.52
IDH3A-219ENST00000560414 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
IDH3A-219ENST00000560414 THSD7BQ9C0I4 1608 aa18.27■□□□□ 0.52
IDH3A-219ENST00000560414 UBE2Q2LH0YL09 131 aa18.27■□□□□ 0.52
IDH3A-219ENST00000560414 RLBP1P12271 317 aa18.27■□□□□ 0.52
IDH3A-219ENST00000560414 LBX1P52954 281 aa18.27■□□□□ 0.52
IDH3A-219ENST00000560414 MTX1Q13505 466 aa18.27■□□□□ 0.52
IDH3A-219ENST00000560414 ATP2B3Q16720 1220 aa18.27■□□□□ 0.52
IDH3A-219ENST00000560414 DEFB129Q9H1M3 183 aa18.27■□□□□ 0.52
IDH3A-219ENST00000560414 VEZTQ9HBM0 779 aa18.27■□□□□ 0.52
IDH3A-219ENST00000560414 MYO1BO43795 1136 aa18.26■□□□□ 0.51
IDH3A-219ENST00000560414 HSPA8P11142 646 aaKnown RBP18.26■□□□□ 0.51
IDH3A-219ENST00000560414 FKBP1BP68106 108 aa18.26■□□□□ 0.51
IDH3A-219ENST00000560414 NOGQ13253 232 aa18.26■□□□□ 0.51
IDH3A-219ENST00000560414 PRKG1Q13976 671 aa18.26■□□□□ 0.51
IDH3A-219ENST00000560414 TTLL12Q14166 644 aaPredicted RBP18.26■□□□□ 0.51
IDH3A-219ENST00000560414 FTSJ3Q8IY81 847 aaKnown RBP18.26■□□□□ 0.51
IDH3A-219ENST00000560414 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
IDH3A-219ENST00000560414 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
IDH3A-219ENST00000560414 BEGAINQ9BUH8 593 aa18.26■□□□□ 0.51
IDH3A-219ENST00000560414 TSKSQ9UJT2 592 aa18.26■□□□□ 0.51
IDH3A-219ENST00000560414 SERPINA10Q9UK55 444 aa18.26■□□□□ 0.51
IDH3A-219ENST00000560414 PNMA6EA0A0J9YXQ4 647 aa18.25■□□□□ 0.51
IDH3A-219ENST00000560414 NF2P35240 595 aa18.25■□□□□ 0.51
IDH3A-219ENST00000560414 CRKP46108 304 aa18.25■□□□□ 0.51
IDH3A-219ENST00000560414 TBC1D22AQ8WUA7 517 aa18.25■□□□□ 0.51
IDH3A-219ENST00000560414 TDRD3Q9H7E2 651 aaKnown RBP18.25■□□□□ 0.51
IDH3A-219ENST00000560414 FZD1Q9UP38 647 aa18.25■□□□□ 0.51
IDH3A-219ENST00000560414 SLC10A3P09131 477 aa18.24■□□□□ 0.51
IDH3A-219ENST00000560414 ADORA1P30542 326 aa18.24■□□□□ 0.51
IDH3A-219ENST00000560414 KIF23Q02241 960 aaPredicted RBP18.24■□□□□ 0.51
IDH3A-219ENST00000560414 TFCP2Q12800 502 aa18.24■□□□□ 0.51
IDH3A-219ENST00000560414 ITPRIPQ8IWB1 547 aa18.24■□□□□ 0.51
IDH3A-219ENST00000560414 TNS4Q8IZW8 715 aa18.24■□□□□ 0.51
IDH3A-219ENST00000560414 C1orf115Q9H7X2 142 aa18.24■□□□□ 0.51
IDH3A-219ENST00000560414 PRDM10Q9NQV6 1147 aa18.24■□□□□ 0.51
IDH3A-219ENST00000560414 ZNF70Q9UC06 446 aaPredicted RBP18.24■□□□□ 0.51
IDH3A-219ENST00000560414 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.24■□□□□ 0.51
IDH3A-219ENST00000560414 PAPPA2Q9BXP8 1791 aa18.24■□□□□ 0.51
IDH3A-219ENST00000560414 PHKA1P46020 1223 aa18.23■□□□□ 0.51
IDH3A-219ENST00000560414 TIMM10P62072 90 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms