RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ZBTB22O15209 634 aa18.85■□□□□ 0.61
SNRPA1-210ENST00000560383 SLC5A1P13866 664 aa18.85■□□□□ 0.61
SNRPA1-210ENST00000560383 MAP3K11Q16584 847 aa18.85■□□□□ 0.61
SNRPA1-210ENST00000560383 MFSD14BQ5SR56 506 aa18.85■□□□□ 0.61
SNRPA1-210ENST00000560383 LDLRAD1Q5T700 205 aa18.85■□□□□ 0.61
SNRPA1-210ENST00000560383 VPS37DQ86XT2 251 aa18.85■□□□□ 0.61
SNRPA1-210ENST00000560383 SERPINA10Q9UK55 444 aa18.85■□□□□ 0.61
SNRPA1-210ENST00000560383 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
SNRPA1-210ENST00000560383 UNCXA6NJT0 531 aa18.84■□□□□ 0.61
SNRPA1-210ENST00000560383 MS4A1P11836 297 aa18.84■□□□□ 0.61
SNRPA1-210ENST00000560383 DGKZQ13574 1117 aa18.84■□□□□ 0.61
SNRPA1-210ENST00000560383 ITPRIPQ8IWB1 547 aa18.84■□□□□ 0.61
SNRPA1-210ENST00000560383 RCAN3Q9UKA8 241 aa18.84■□□□□ 0.61
SNRPA1-210ENST00000560383 JAG2Q9Y219 1238 aa18.84■□□□□ 0.61
SNRPA1-210ENST00000560383 MYH13Q9UKX3 1938 aa18.84■□□□□ 0.61
SNRPA1-210ENST00000560383 TM4SF4P48230 202 aa18.83■□□□□ 0.6
SNRPA1-210ENST00000560383 SREBF2Q12772 1141 aa18.83■□□□□ 0.6
SNRPA1-210ENST00000560383 POLA2Q14181 598 aa18.83■□□□□ 0.6
SNRPA1-210ENST00000560383 ATP2B3Q16720 1220 aa18.83■□□□□ 0.6
SNRPA1-210ENST00000560383 PRMT6Q96LA8 375 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-210ENST00000560383 PCDHAC2Q9Y5I4 1007 aa18.83■□□□□ 0.6
SNRPA1-210ENST00000560383 PPP1R12BO60237 982 aaPredicted RBP18.82■□□□□ 0.6
SNRPA1-210ENST00000560383 ATP8B2P98198 1209 aa18.82■□□□□ 0.6
SNRPA1-210ENST00000560383 TNFAIP1Q13829 316 aa18.82■□□□□ 0.6
SNRPA1-210ENST00000560383 NOM1Q5C9Z4 860 aaKnown RBP18.82■□□□□ 0.6
SNRPA1-210ENST00000560383 PANK1Q8TE04 598 aa18.82■□□□□ 0.6
SNRPA1-210ENST00000560383 SSH3Q8TE77 659 aa18.82■□□□□ 0.6
SNRPA1-210ENST00000560383 TBC1D22AQ8WUA7 517 aa18.82■□□□□ 0.6
SNRPA1-210ENST00000560383 ANGEL1Q9UNK9 670 aaKnown RBP18.82■□□□□ 0.6
SNRPA1-210ENST00000560383 IQSEC3Q9UPP2 1182 aaPredicted RBP18.82■□□□□ 0.6
SNRPA1-210ENST00000560383 OTOFQ9HC10 1997 aa18.81■□□□□ 0.6
SNRPA1-210ENST00000560383 CLRN2A0PK11 232 aa18.81■□□□□ 0.6
SNRPA1-210ENST00000560383 CCDC85CA6NKD9 419 aa18.81■□□□□ 0.6
SNRPA1-210ENST00000560383 SUPT20HL1Q3ZLR7 823 aa18.81■□□□□ 0.6
SNRPA1-210ENST00000560383 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
SNRPA1-210ENST00000560383 CNKSR2Q8WXI2 1034 aa18.81■□□□□ 0.6
SNRPA1-210ENST00000560383 CFHR5Q9BXR6 569 aa18.81■□□□□ 0.6
SNRPA1-210ENST00000560383 TTF2Q9UNY4 1162 aaKnown RBP18.81■□□□□ 0.6
SNRPA1-210ENST00000560383 ZBTB48P10074 688 aaPredicted RBP18.8■□□□□ 0.6
SNRPA1-210ENST00000560383 RGS19P49795 217 aa18.8■□□□□ 0.6
SNRPA1-210ENST00000560383 RBM5P52756 815 aaKnown RBP eCLIP18.8■□□□□ 0.6
SNRPA1-210ENST00000560383 HDLBPQ00341 1268 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-210ENST00000560383 PRKG1Q13976 671 aa18.8■□□□□ 0.6
SNRPA1-210ENST00000560383 SPRYD7Q5W111 196 aa18.8■□□□□ 0.6
SNRPA1-210ENST00000560383 VEZTQ9HBM0 779 aa18.8■□□□□ 0.6
SNRPA1-210ENST00000560383 SUGT1Q9Y2Z0 365 aa18.8■□□□□ 0.6
SNRPA1-210ENST00000560383 AOX1Q06278 1338 aa18.79■□□□□ 0.6
SNRPA1-210ENST00000560383 FRAT2O75474 233 aaPredicted RBP18.79■□□□□ 0.6
SNRPA1-210ENST00000560383 RASA3Q14644 834 aa18.79■□□□□ 0.6
SNRPA1-210ENST00000560383 AKAP2Q9Y2D5 859 aa18.79■□□□□ 0.6
SNRPA1-210ENST00000560383 CRKP46108 304 aa18.78■□□□□ 0.6
SNRPA1-210ENST00000560383 TFCP2Q12800 502 aa18.78■□□□□ 0.6
SNRPA1-210ENST00000560383 CHAF1AQ13111 956 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-210ENST00000560383 GRIK5Q16478 980 aa18.78■□□□□ 0.6
SNRPA1-210ENST00000560383 CTU1Q7Z7A3 348 aaKnown RBP18.78■□□□□ 0.6
SNRPA1-210ENST00000560383 MRIQ9BWK5 157 aa18.78■□□□□ 0.6
SNRPA1-210ENST00000560383 C1orf115Q9H7X2 142 aa18.78■□□□□ 0.6
SNRPA1-210ENST00000560383 ZNF70Q9UC06 446 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-210ENST00000560383 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-210ENST00000560383 A0A1B0GUL7 405 aa18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 MANSC4A6NHS7 340 aaPredicted RBP18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 SEMA3EO15041 775 aa18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 ALDH1A1P00352 501 aa18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 ADORA1P30542 326 aa18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 INHBEP58166 350 aa18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 TIMM10P62072 90 aa18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 G3BP1Q13283 466 aaKnown RBP eCLIP18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 MVPQ14764 893 aaKnown RBP18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 NBPF12Q5TAG4 269 aaPredicted RBP18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 WDR66Q8TBY9 1149 aa18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 GNL3LQ9NVN8 582 aaKnown RBP18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 NOP58Q9Y2X3 529 aaKnown RBP18.77■□□□□ 0.6
SNRPA1-210ENST00000560383 MAST3O60307 1309 aa18.76■□□□□ 0.59
SNRPA1-210ENST00000560383 PHKA1P46020 1223 aa18.76■□□□□ 0.59
SNRPA1-210ENST00000560383 IREB2P48200 963 aaKnown RBP18.76■□□□□ 0.59
SNRPA1-210ENST00000560383 CCDC102BQ68D86 513 aa18.76■□□□□ 0.59
SNRPA1-210ENST00000560383 CEP85Q6P2H3 762 aa18.76■□□□□ 0.59
SNRPA1-210ENST00000560383 SLC10A4Q96EP9 437 aa18.76■□□□□ 0.59
SNRPA1-210ENST00000560383 TDRD3Q9H7E2 651 aaKnown RBP18.76■□□□□ 0.59
SNRPA1-210ENST00000560383 FZD1Q9UP38 647 aa18.76■□□□□ 0.59
SNRPA1-210ENST00000560383 TNRC18O15417 2968 aaPredicted RBP18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 TNNI2P48788 182 aa18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 MKRN3Q13064 507 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 PDE3AQ14432 1141 aa18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 PKN2Q16513 984 aaKnown RBP18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 ANKRD13AQ8IZ07 590 aa18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 TEKT1Q969V4 418 aa18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 WNK4Q96J92 1243 aa18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 ZBTB40Q9NUA8 1239 aa18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 DENND2AQ9ULE3 1009 aa18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 DDX19BQ9UMR2 479 aa18.75■□□□□ 0.59
SNRPA1-210ENST00000560383 PDS5AQ29RF7 1337 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 SALL1Q9NSC2 1324 aa18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 HTTP42858 3142 aa18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 USP2O75604 605 aaPredicted RBP18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 TBC1D8O95759 1140 aa18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 ZNF296Q8WUU4 475 aaPredicted RBP18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 XAGE2Q96GT9 111 aa18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 CLMNQ96JQ2 1002 aa18.74■□□□□ 0.59
SNRPA1-210ENST00000560383 ZDHHC15Q96MV8 337 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms