RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
APH1B-208ENST00000560353 HOXB7P09629 217 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 PSMC4P43686 418 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 RIPK4P57078 832 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 TNFAIP1Q13829 316 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 VGLL4Q14135 290 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 LRIT3Q3SXY7 679 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 GDF15Q99988 308 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 CWC25Q9NXE8 425 aaPredicted RBP13.34□□□□□ -0.27
APH1B-208ENST00000560353 CSADQ9Y600 493 aa13.34□□□□□ -0.27
APH1B-208ENST00000560353 CHL1O00533 1208 aa13.33□□□□□ -0.28
APH1B-208ENST00000560353 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
APH1B-208ENST00000560353 SGPL1O95470 568 aa13.33□□□□□ -0.28
APH1B-208ENST00000560353 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.28
APH1B-208ENST00000560353 CERS5Q8N5B7 392 aa13.33□□□□□ -0.28
APH1B-208ENST00000560353 JARID2Q92833 1246 aaPredicted RBP13.33□□□□□ -0.28
APH1B-208ENST00000560353 ANKRD2Q9GZV1 360 aa13.33□□□□□ -0.28
APH1B-208ENST00000560353 PRDM6Q9NQX0 595 aa13.33□□□□□ -0.28
APH1B-208ENST00000560353 PCDHAC2Q9Y5I4 1007 aa13.33□□□□□ -0.28
APH1B-208ENST00000560353 VCANP13611 3396 aa13.32□□□□□ -0.28
APH1B-208ENST00000560353 BTBD19C9JJ37 291 aa13.32□□□□□ -0.28
APH1B-208ENST00000560353 OSBPP22059 807 aa13.32□□□□□ -0.28
APH1B-208ENST00000560353 CTSWP56202 376 aa13.32□□□□□ -0.28
APH1B-208ENST00000560353 C17orf99Q6UX52 265 aa13.32□□□□□ -0.28
APH1B-208ENST00000560353 MYD88Q99836 296 aa13.32□□□□□ -0.28
APH1B-208ENST00000560353 CD209Q9NNX6 404 aa13.32□□□□□ -0.28
APH1B-208ENST00000560353 SPDYE5A6NIY4 337 aa13.31□□□□□ -0.28
APH1B-208ENST00000560353 F8W031 263 aaPredicted RBP13.31□□□□□ -0.28
APH1B-208ENST00000560353 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
APH1B-208ENST00000560353 CTGFP29279 349 aa13.31□□□□□ -0.28
APH1B-208ENST00000560353 RBM5P52756 815 aaKnown RBP eCLIP13.31□□□□□ -0.28
APH1B-208ENST00000560353 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
APH1B-208ENST00000560353 TTLL11Q8NHH1 800 aa13.31□□□□□ -0.28
APH1B-208ENST00000560353 MYPNQ86TC9 1320 aa13.31□□□□□ -0.28
APH1B-208ENST00000560353 GABBR2O75899 941 aa13.3□□□□□ -0.28
APH1B-208ENST00000560353 ECM2O94769 699 aaPredicted RBP13.3□□□□□ -0.28
APH1B-208ENST00000560353 KLRK1P26718 216 aa13.3□□□□□ -0.28
APH1B-208ENST00000560353 IGHMBP2P38935 993 aaKnown RBP13.3□□□□□ -0.28
APH1B-208ENST00000560353 KCNJ4P48050 445 aa13.3□□□□□ -0.28
APH1B-208ENST00000560353 FKBP1AP62942 108 aaKnown RBP13.3□□□□□ -0.28
APH1B-208ENST00000560353 ERO1BQ86YB8 467 aa13.3□□□□□ -0.28
APH1B-208ENST00000560353 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
APH1B-208ENST00000560353 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.3□□□□□ -0.28
APH1B-208ENST00000560353 UNC93B1Q9H1C4 597 aa13.3□□□□□ -0.28
APH1B-208ENST00000560353 GREM2Q9H772 168 aa13.3□□□□□ -0.28
APH1B-208ENST00000560353 CPA4Q9UI42 421 aa13.3□□□□□ -0.28
APH1B-208ENST00000560353 SPTBN5Q9NRC6 3674 aaKnown RBP13.3□□□□□ -0.28
APH1B-208ENST00000560353 BCAMP50895 628 aa13.29□□□□□ -0.28
APH1B-208ENST00000560353 TEPSINQ96N21 525 aa13.29□□□□□ -0.28
APH1B-208ENST00000560353 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
APH1B-208ENST00000560353 ZNF70Q9UC06 446 aaPredicted RBP13.29□□□□□ -0.28
APH1B-208ENST00000560353 AOX1Q06278 1338 aa13.29□□□□□ -0.28
APH1B-208ENST00000560353 ZSWIM8A7E2V4 1837 aa13.28□□□□□ -0.28
APH1B-208ENST00000560353 NECAB2Q7Z6G3 386 aa13.28□□□□□ -0.28
APH1B-208ENST00000560353 TDHQ8IZJ6 230 aa13.28□□□□□ -0.28
APH1B-208ENST00000560353 LAS1LQ9Y4W2 734 aaKnown RBP13.28□□□□□ -0.28
APH1B-208ENST00000560353 RPTORQ8N122 1335 aa13.28□□□□□ -0.28
APH1B-208ENST00000560353 IRF6O14896 467 aa13.27□□□□□ -0.29
APH1B-208ENST00000560353 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
APH1B-208ENST00000560353 TNNI2P48788 182 aa13.27□□□□□ -0.29
APH1B-208ENST00000560353 FCGRTP55899 365 aa13.27□□□□□ -0.29
APH1B-208ENST00000560353 PRKCZQ05513 592 aa13.27□□□□□ -0.29
APH1B-208ENST00000560353 PPIL2Q13356 520 aa13.27□□□□□ -0.29
APH1B-208ENST00000560353 GSE1Q14687 1217 aa13.27□□□□□ -0.29
APH1B-208ENST00000560353 SPOCK2Q92563 424 aa13.27□□□□□ -0.29
APH1B-208ENST00000560353 PAWRQ96IZ0 340 aaKnown RBP13.27□□□□□ -0.29
APH1B-208ENST00000560353 DEFB118Q96PH6 123 aa13.27□□□□□ -0.29
APH1B-208ENST00000560353 METTL22Q9BUU2 404 aaPredicted RBP13.27□□□□□ -0.29
APH1B-208ENST00000560353 ECM29Q5VYK3 1845 aa13.27□□□□□ -0.29
APH1B-208ENST00000560353 ADCY3O60266 1144 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 IL1R1P14778 569 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 TRIM26Q12899 539 aaPredicted RBP13.26□□□□□ -0.29
APH1B-208ENST00000560353 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 C15orf52Q6ZUT6 534 aaKnown RBP13.26□□□□□ -0.29
APH1B-208ENST00000560353 ZNF804AQ7Z570 1209 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 ANKRD23Q86SG2 305 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 C7orf61Q8IZ16 206 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 MPHOSPH8Q99549 860 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 TMEM39BQ9GZU3 492 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 TDRD3Q9H7E2 651 aaKnown RBP13.26□□□□□ -0.29
APH1B-208ENST00000560353 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
APH1B-208ENST00000560353 OTOFQ9HC10 1997 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 SERPINA10Q9UK55 444 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 SNCAIPQ9Y6H5 919 aa13.26□□□□□ -0.29
APH1B-208ENST00000560353 LAMA2P24043 3122 aaKnown RBP13.26□□□□□ -0.29
APH1B-208ENST00000560353 ADGRA2Q96PE1 1338 aa13.25□□□□□ -0.29
APH1B-208ENST00000560353 PDHXO00330 501 aa13.25□□□□□ -0.29
APH1B-208ENST00000560353 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
APH1B-208ENST00000560353 NUBP1P53384 320 aa13.25□□□□□ -0.29
APH1B-208ENST00000560353 FAM109BQ6ICB4 259 aaPredicted RBP13.25□□□□□ -0.29
APH1B-208ENST00000560353 UBE2OQ9C0C9 1292 aaKnown RBP13.25□□□□□ -0.29
APH1B-208ENST00000560353 CRISPLD2Q9H0B8 497 aa13.25□□□□□ -0.29
APH1B-208ENST00000560353 ZMYND8Q9ULU4 1186 aaPredicted RBP13.25□□□□□ -0.29
APH1B-208ENST00000560353 FAM205AQ6ZU69 1335 aa13.24□□□□□ -0.29
APH1B-208ENST00000560353 TCP10L2B9ZVM9 353 aa13.24□□□□□ -0.29
APH1B-208ENST00000560353 INHAP05111 366 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms