RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PPP2R3BQ9Y5P8 575 aa16.36■□□□□ 0.21
SMAD3-213ENST00000560175 FAM155AB1AL88 458 aaPredicted RBP16.35■□□□□ 0.21
SMAD3-213ENST00000560175 MYO1BO43795 1136 aa16.35■□□□□ 0.21
SMAD3-213ENST00000560175 HSPA1AP0DMV8 641 aaKnown RBP16.35■□□□□ 0.21
SMAD3-213ENST00000560175 HSPA1BP0DMV9 641 aaKnown RBP16.35■□□□□ 0.21
SMAD3-213ENST00000560175 CHAF1AQ13111 956 aaPredicted RBP16.35■□□□□ 0.21
SMAD3-213ENST00000560175 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
SMAD3-213ENST00000560175 HHIPL2Q6UWX4 724 aa16.35■□□□□ 0.21
SMAD3-213ENST00000560175 ZDHHC15Q96MV8 337 aa16.35■□□□□ 0.21
SMAD3-213ENST00000560175 DEFB129Q9H1M3 183 aa16.35■□□□□ 0.21
SMAD3-213ENST00000560175 PRAMEF18Q5VWM3 479 aa16.34■□□□□ 0.21
SMAD3-213ENST00000560175 RGMBQ6NW40 437 aa16.34■□□□□ 0.21
SMAD3-213ENST00000560175 MAST3O60307 1309 aa16.34■□□□□ 0.21
SMAD3-213ENST00000560175 MAP2K1Q02750 393 aaPredicted RBP16.33■□□□□ 0.2
SMAD3-213ENST00000560175 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
SMAD3-213ENST00000560175 APOBEC3HQ6NTF7 200 aaKnown RBP16.33■□□□□ 0.2
SMAD3-213ENST00000560175 RPAP2Q8IXW5 612 aaPredicted RBP16.33■□□□□ 0.2
SMAD3-213ENST00000560175 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
SMAD3-213ENST00000560175 ZNF70Q9UC06 446 aaPredicted RBP16.33■□□□□ 0.2
SMAD3-213ENST00000560175 COG6Q9Y2V7 657 aa16.33■□□□□ 0.2
SMAD3-213ENST00000560175 SURF6O75683 361 aaKnown RBP16.32■□□□□ 0.2
SMAD3-213ENST00000560175 RBM5P52756 815 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMAD3-213ENST00000560175 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
SMAD3-213ENST00000560175 FKBP1CQ5VVH2 108 aa16.32■□□□□ 0.2
SMAD3-213ENST00000560175 CCDC102AQ96A19 550 aa16.32■□□□□ 0.2
SMAD3-213ENST00000560175 CHMP4BQ9H444 224 aaKnown RBP16.32■□□□□ 0.2
SMAD3-213ENST00000560175 TDRD3Q9H7E2 651 aaKnown RBP16.32■□□□□ 0.2
SMAD3-213ENST00000560175 AKAP11Q9UKA4 1901 aa16.32■□□□□ 0.2
SMAD3-213ENST00000560175 CLRN2A0PK11 232 aa16.31■□□□□ 0.2
SMAD3-213ENST00000560175 ARID4AP29374 1257 aaPredicted RBP16.31■□□□□ 0.2
SMAD3-213ENST00000560175 PRDX5P30044 214 aa16.31■□□□□ 0.2
SMAD3-213ENST00000560175 NOGQ13253 232 aa16.31■□□□□ 0.2
SMAD3-213ENST00000560175 TNNI3KQ59H18 835 aa16.31■□□□□ 0.2
SMAD3-213ENST00000560175 LDLRAD1Q5T700 205 aa16.31■□□□□ 0.2
SMAD3-213ENST00000560175 C20orf194Q5TEA3 1177 aa16.31■□□□□ 0.2
SMAD3-213ENST00000560175 SIRT2Q8IXJ6 389 aa16.31■□□□□ 0.2
SMAD3-213ENST00000560175 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
SMAD3-213ENST00000560175 TEPSINQ96N21 525 aa16.31■□□□□ 0.2
SMAD3-213ENST00000560175 FPGT-TNNI3KV9GXZ4 949 aa16.31■□□□□ 0.2
SMAD3-213ENST00000560175 MYH2Q9UKX2 1941 aa16.3■□□□□ 0.2
SMAD3-213ENST00000560175 UNCXA6NJT0 531 aa16.3■□□□□ 0.2
SMAD3-213ENST00000560175 AOC2O75106 756 aa16.3■□□□□ 0.2
SMAD3-213ENST00000560175 SLC10A3P09131 477 aa16.3■□□□□ 0.2
SMAD3-213ENST00000560175 NF2P35240 595 aa16.3■□□□□ 0.2
SMAD3-213ENST00000560175 TNFAIP1Q13829 316 aa16.3■□□□□ 0.2
SMAD3-213ENST00000560175 RASA3Q14644 834 aa16.3■□□□□ 0.2
SMAD3-213ENST00000560175 ZGPATQ8N5A5 531 aaKnown RBP16.3■□□□□ 0.2
SMAD3-213ENST00000560175 FAM163AQ96GL9 167 aaPredicted RBP16.3■□□□□ 0.2
SMAD3-213ENST00000560175 ZNF512BQ96KM6 892 aaPredicted RBP16.3■□□□□ 0.2
SMAD3-213ENST00000560175 NEUROD6Q96NK8 337 aa16.3■□□□□ 0.2
SMAD3-213ENST00000560175 SSC5DA1L4H1 1573 aa16.3■□□□□ 0.2
SMAD3-213ENST00000560175 FOXN1O15353 648 aa16.29■□□□□ 0.2
SMAD3-213ENST00000560175 LDHBP07195 334 aaKnown RBP16.29■□□□□ 0.2
SMAD3-213ENST00000560175 ZNF157P51786 506 aaPredicted RBP16.29■□□□□ 0.2
SMAD3-213ENST00000560175 SUPT20HL1Q3ZLR7 823 aa16.29■□□□□ 0.2
SMAD3-213ENST00000560175 MOB2Q70IA6 237 aa16.29■□□□□ 0.2
SMAD3-213ENST00000560175 ZIC5Q96T25 663 aa16.29■□□□□ 0.2
SMAD3-213ENST00000560175 HMG20BQ9P0W2 317 aa16.29■□□□□ 0.2
SMAD3-213ENST00000560175 UBE2Q2LH0YL09 131 aa16.28■□□□□ 0.2
SMAD3-213ENST00000560175 UQCRFS1P1P0C7P4 283 aa16.28■□□□□ 0.2
SMAD3-213ENST00000560175 NBPF12Q5TAG4 269 aaPredicted RBP16.28■□□□□ 0.2
SMAD3-213ENST00000560175 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
SMAD3-213ENST00000560175 FAM83AQ86UY5 434 aa16.28■□□□□ 0.2
SMAD3-213ENST00000560175 RASAL3Q86YV0 1011 aa16.28■□□□□ 0.2
SMAD3-213ENST00000560175 VEZTQ9HBM0 779 aa16.28■□□□□ 0.2
SMAD3-213ENST00000560175 DAGLAQ9Y4D2 1042 aa16.28■□□□□ 0.2
SMAD3-213ENST00000560175 GAKO14976 1311 aa16.27■□□□□ 0.2
SMAD3-213ENST00000560175 MCAMP43121 646 aa16.27■□□□□ 0.2
SMAD3-213ENST00000560175 ARMC9Q7Z3E5 817 aa16.27■□□□□ 0.2
SMAD3-213ENST00000560175 SPATA5Q8NB90 893 aa16.27■□□□□ 0.2
SMAD3-213ENST00000560175 ZNF384Q8TF68 577 aa16.27■□□□□ 0.2
SMAD3-213ENST00000560175 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
SMAD3-213ENST00000560175 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
SMAD3-213ENST00000560175 LAMB1P07942 1786 aa16.27■□□□□ 0.2
SMAD3-213ENST00000560175 IGSF3O75054 1194 aa16.26■□□□□ 0.19
SMAD3-213ENST00000560175 USP2O75604 605 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-213ENST00000560175 TNNI2P48788 182 aa16.26■□□□□ 0.19
SMAD3-213ENST00000560175 CTCFP49711 727 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-213ENST00000560175 OS9Q13438 667 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-213ENST00000560175 DIXDC1Q155Q3 683 aa16.26■□□□□ 0.19
SMAD3-213ENST00000560175 HSP90AB4PQ58FF6 505 aa16.26■□□□□ 0.19
SMAD3-213ENST00000560175 SPTY2D1Q68D10 685 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-213ENST00000560175 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
SMAD3-213ENST00000560175 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
SMAD3-213ENST00000560175 PRDM10Q9NQV6 1147 aa16.26■□□□□ 0.19
SMAD3-213ENST00000560175 TCP10L2B9ZVM9 353 aa16.25■□□□□ 0.19
SMAD3-213ENST00000560175 CA12O43570 354 aa16.25■□□□□ 0.19
SMAD3-213ENST00000560175 PPP1R12BO60237 982 aaPredicted RBP16.25■□□□□ 0.19
SMAD3-213ENST00000560175 HMMRO75330 724 aa16.25■□□□□ 0.19
SMAD3-213ENST00000560175 KIF23Q02241 960 aaPredicted RBP16.25■□□□□ 0.19
SMAD3-213ENST00000560175 GRM1Q13255 1194 aa16.25■□□□□ 0.19
SMAD3-213ENST00000560175 GORABQ5T7V8 394 aa16.25■□□□□ 0.19
SMAD3-213ENST00000560175 CDC42EP5Q6NZY7 148 aa16.25■□□□□ 0.19
SMAD3-213ENST00000560175 DBNLQ9UJU6 430 aaKnown RBP16.25■□□□□ 0.19
SMAD3-213ENST00000560175 EXOC6BQ9Y2D4 811 aa16.25■□□□□ 0.19
SMAD3-213ENST00000560175 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
SMAD3-213ENST00000560175 CCDC158Q5M9N0 1113 aa16.24■□□□□ 0.19
SMAD3-213ENST00000560175 COL13A1Q5TAT6 717 aaPredicted RBP16.24■□□□□ 0.19
SMAD3-213ENST00000560175 PI16Q6UXB8 463 aa16.24■□□□□ 0.19
SMAD3-213ENST00000560175 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms