RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ZMYM1Q5SVZ6 1142 aa12.57□□□□□ -0.4
TPM1-221ENST00000559831 DACT2Q5SW24 774 aa12.57□□□□□ -0.4
TPM1-221ENST00000559831 STRIP1Q5VSL9 837 aa12.57□□□□□ -0.4
TPM1-221ENST00000559831 NAA16Q6N069 864 aaPredicted RBP12.57□□□□□ -0.4
TPM1-221ENST00000559831 APPBP2Q92624 585 aa12.57□□□□□ -0.4
TPM1-221ENST00000559831 SEC62Q99442 399 aaKnown RBP12.57□□□□□ -0.4
TPM1-221ENST00000559831 M0R2C6 588 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 PSMD14O00487 310 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 SEC24BO95487 1268 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 UBE3CQ15386 1083 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 CIAPIN1Q6FI81 312 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 CCDC129Q6ZRS4 1044 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 TICAM2Q86XR7 235 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 CERS5Q8N5B7 392 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 NSUN4Q96CB9 384 aaKnown RBP12.56□□□□□ -0.4
TPM1-221ENST00000559831 IL25Q9H293 177 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 TTF2Q9UNY4 1162 aaKnown RBP12.56□□□□□ -0.4
TPM1-221ENST00000559831 RAD50Q92878 1312 aa12.56□□□□□ -0.4
TPM1-221ENST00000559831 TCRBV5S4A2TA0A5A2 114 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 SGSM2O43147 1006 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 GRIN3BO60391 1043 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 EIF6P56537 245 aaKnown RBP12.55□□□□□ -0.4
TPM1-221ENST00000559831 FKBP1AP62942 108 aaKnown RBP12.55□□□□□ -0.4
TPM1-221ENST00000559831 GSTO1P78417 241 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 ZNF589Q86UQ0 364 aaPredicted RBP12.55□□□□□ -0.4
TPM1-221ENST00000559831 KIAA0825Q8IV33 1275 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 MIGA1Q8NAN2 632 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 OSBP2Q969R2 916 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 PUS7LQ9H0K6 701 aaKnown RBP12.55□□□□□ -0.4
TPM1-221ENST00000559831 ANO2Q9NQ90 1003 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 MAST3O60307 1309 aa12.55□□□□□ -0.4
TPM1-221ENST00000559831 ECM29Q5VYK3 1845 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
TPM1-221ENST00000559831 MBD4O95243 580 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 SCNN1DP51172 638 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 CXCL9Q07325 125 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
TPM1-221ENST00000559831 KIAA1211Q6ZU35 1233 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 ADGRA1Q86SQ6 560 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 ZNF384Q8TF68 577 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 SUGT1Q9Y2Z0 365 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 GJA3Q9Y6H8 435 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 CCDC171Q6TFL3 1326 aa12.54□□□□□ -0.4
TPM1-221ENST00000559831 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 GPAA1O43292 621 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 REC8O95072 547 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 LDHCP07864 332 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 VIL1P09327 827 aaKnown RBP12.53□□□□□ -0.4
TPM1-221ENST00000559831 TNIP1Q15025 636 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 C9orf131Q5VYM1 1079 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 SLF2Q8IX21 1173 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
TPM1-221ENST00000559831 ARMT1Q9H993 441 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 UPF2Q9HAU5 1272 aaKnown RBP12.53□□□□□ -0.4
TPM1-221ENST00000559831 ZBTB12Q9Y330 459 aaPredicted RBP12.53□□□□□ -0.4
TPM1-221ENST00000559831 MROH7-TTC4A0A0A0MT08 1334 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 MYO3BQ8WXR4 1341 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
TPM1-221ENST00000559831 FZD9O00144 591 aa12.52□□□□□ -0.41
TPM1-221ENST00000559831 IGSF3O75054 1194 aa12.52□□□□□ -0.41
TPM1-221ENST00000559831 RBM5P52756 815 aaKnown RBP eCLIP12.52□□□□□ -0.41
TPM1-221ENST00000559831 DYNLL1P63167 89 aaKnown RBP12.52□□□□□ -0.41
TPM1-221ENST00000559831 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
TPM1-221ENST00000559831 AATFQ9NY61 560 aaKnown RBP eCLIP12.52□□□□□ -0.41
TPM1-221ENST00000559831 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.41
TPM1-221ENST00000559831 NAV1Q8NEY1 1877 aa12.51□□□□□ -0.41
TPM1-221ENST00000559831 BTDP43251 543 aa12.51□□□□□ -0.41
TPM1-221ENST00000559831 PTH1RQ03431 593 aa12.51□□□□□ -0.41
TPM1-221ENST00000559831 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
TPM1-221ENST00000559831 TEKT1Q969V4 418 aa12.51□□□□□ -0.41
TPM1-221ENST00000559831 LSG1Q9H089 658 aaKnown RBP12.51□□□□□ -0.41
TPM1-221ENST00000559831 HDAC9Q9UKV0 1011 aa12.51□□□□□ -0.41
TPM1-221ENST00000559831 DAGLAQ9Y4D2 1042 aa12.51□□□□□ -0.41
TPM1-221ENST00000559831 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
TPM1-221ENST00000559831 FOCADQ5VW36 1801 aa12.51□□□□□ -0.41
TPM1-221ENST00000559831 DCAF8L1A6NGE4 600 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 BAG3O95817 575 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 APPP05067 770 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 CRKP46108 304 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 GMPSP49915 693 aaPredicted RBP12.5□□□□□ -0.41
TPM1-221ENST00000559831 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 AGBL3Q8NEM8 1001 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 STRBPQ96SI9 672 aaKnown RBP12.5□□□□□ -0.41
TPM1-221ENST00000559831 GMLQ99445 158 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 USP26Q9BXU7 913 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 GAKO14976 1311 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 MYH1P12882 1939 aa12.5□□□□□ -0.41
TPM1-221ENST00000559831 USP17L8P0C7I0 530 aa12.49□□□□□ -0.41
TPM1-221ENST00000559831 HSPD1P10809 573 aaKnown RBP12.49□□□□□ -0.41
TPM1-221ENST00000559831 CFAP100Q494V2 611 aa12.49□□□□□ -0.41
TPM1-221ENST00000559831 HHIPL2Q6UWX4 724 aa12.49□□□□□ -0.41
TPM1-221ENST00000559831 OGFOD1Q8N543 542 aa12.49□□□□□ -0.41
TPM1-221ENST00000559831 SH3RF3Q8TEJ3 882 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms