RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RRAGDQ9NQL2 400 aaPredicted RBP13.23□□□□□ -0.29
CLPX-204ENST00000559152 USP21Q9UK80 565 aa13.23□□□□□ -0.29
CLPX-204ENST00000559152 CARMIL3Q8ND23 1372 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 GOLGA8BA8MQT2 603 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 CDKL5O76039 1030 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 CCDC192P0DO97 292 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 BCAMP50895 628 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 CAVIN4Q5BKX8 364 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 CPLX2Q6PUV4 134 aaKnown RBP13.22□□□□□ -0.29
CLPX-204ENST00000559152 RNF214Q8ND24 703 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 NUP62CLQ9H1M0 184 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 LRP2BPQ9P2M1 347 aa13.22□□□□□ -0.29
CLPX-204ENST00000559152 TFIP11Q9UBB9 837 aaKnown RBP13.22□□□□□ -0.29
CLPX-204ENST00000559152 ZPR1O75312 459 aa13.21□□□□□ -0.29
CLPX-204ENST00000559152 ANTXR2P58335 489 aa13.21□□□□□ -0.29
CLPX-204ENST00000559152 IFNL3Q8IZI9 196 aa13.21□□□□□ -0.29
CLPX-204ENST00000559152 KRT23Q9C075 422 aa13.21□□□□□ -0.29
CLPX-204ENST00000559152 NCOA5Q9HCD5 579 aaKnown RBP13.21□□□□□ -0.29
CLPX-204ENST00000559152 ZNF804BA4D1E1 1349 aa13.21□□□□□ -0.29
CLPX-204ENST00000559152 MBD4O95243 580 aa13.21□□□□□ -0.29
CLPX-204ENST00000559152 MAP3K11Q16584 847 aa13.21□□□□□ -0.29
CLPX-204ENST00000559152 ZSCAN30Q86W11 494 aa13.21□□□□□ -0.29
CLPX-204ENST00000559152 NLRP3Q96P20 1036 aa13.21□□□□□ -0.29
CLPX-204ENST00000559152 AFF2P51816 1311 aa13.21□□□□□ -0.3
CLPX-204ENST00000559152 SEMA3EO15041 775 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 FBXO41Q8TF61 875 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 RCOR1Q9UKL0 485 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
CLPX-204ENST00000559152 SH2B2O14492 632 aaPredicted RBP13.2□□□□□ -0.3
CLPX-204ENST00000559152 TPRNQ4KMQ1 711 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
CLPX-204ENST00000559152 TBC1D10CQ8IV04 446 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 BICD2Q8TD16 824 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 C8orf76Q96K31 380 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 FUCA2Q9BTY2 467 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 TNMDQ9H2S6 317 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 DENND2AQ9ULE3 1009 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
CLPX-204ENST00000559152 MSNP26038 577 aaKnown RBP13.19□□□□□ -0.3
CLPX-204ENST00000559152 TBC1D9BQ66K14 1250 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 GIMAP6Q6P9H5 292 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 VPS37DQ86XT2 251 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 ANKRD2Q9GZV1 360 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 RNF41Q9H4P4 317 aaPredicted RBP13.19□□□□□ -0.3
CLPX-204ENST00000559152 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
CLPX-204ENST00000559152 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
CLPX-204ENST00000559152 DOCK2Q92608 1830 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 SNAP23O00161 211 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 FDPSP14324 419 aaKnown RBP13.19□□□□□ -0.3
CLPX-204ENST00000559152 LIFRP42702 1097 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 TDO2P48775 406 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 METAP2P50579 478 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLPX-204ENST00000559152 SART3Q15020 963 aaKnown RBP13.19□□□□□ -0.3
CLPX-204ENST00000559152 AKNAD1Q5T1N1 836 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 MFSD6Q6ZSS7 791 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 BRAPQ7Z569 592 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 NBPF5PQ86XG9 351 aaPredicted RBP13.19□□□□□ -0.3
CLPX-204ENST00000559152 ARMT1Q9H993 441 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 DACT1Q9NYF0 836 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
CLPX-204ENST00000559152 GSG1L2A8MUP6 293 aa13.18□□□□□ -0.3
CLPX-204ENST00000559152 GNPATO15228 680 aa13.18□□□□□ -0.3
CLPX-204ENST00000559152 LIG1P18858 919 aa13.18□□□□□ -0.3
CLPX-204ENST00000559152 ADD1P35611 737 aaKnown RBP13.18□□□□□ -0.3
CLPX-204ENST00000559152 RPS8P62241 208 aaKnown RBP13.18□□□□□ -0.3
CLPX-204ENST00000559152 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
CLPX-204ENST00000559152 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
CLPX-204ENST00000559152 CLSTN2Q9H4D0 955 aa13.18□□□□□ -0.3
CLPX-204ENST00000559152 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
CLPX-204ENST00000559152 GPHNQ9NQX3 736 aaPredicted RBP13.18□□□□□ -0.3
CLPX-204ENST00000559152 PDS5AQ29RF7 1337 aaKnown RBP13.18□□□□□ -0.3
CLPX-204ENST00000559152 B4E1Z4 1266 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 CTAGE5O15320 804 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 IGSF3O75054 1194 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 CAVIN2O95810 425 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 CYB5R4Q7L1T6 521 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 NHSQ6T4R5 1651 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 THSD7AQ9UPZ6 1657 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 ZBTB22O15209 634 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 ZBTB43O43298 467 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 CYP7A1P22680 504 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 TMEM67Q5HYA8 995 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
CLPX-204ENST00000559152 IGDCC4Q8TDY8 1250 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 PGBD1Q96JS3 809 aa13.17□□□□□ -0.3
CLPX-204ENST00000559152 EPB41L4AQ9HCS5 686 aaPredicted RBP13.17□□□□□ -0.3
CLPX-204ENST00000559152 RAI14Q9P0K7 980 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms