RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 DGKZQ13574 1117 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 PRKG1Q13976 671 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 RASA3Q14644 834 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 METTL24Q5JXM2 366 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 SPRYD7Q5W111 196 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
SMAD3-209ENST00000558894 MRIQ9BWK5 157 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 TDRD3Q9H7E2 651 aaKnown RBP6.97□□□□□ -1.29
SMAD3-209ENST00000558894 SMC4Q9NTJ3 1288 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 ZNF70Q9UC06 446 aaPredicted RBP6.97□□□□□ -1.29
SMAD3-209ENST00000558894 ANGEL1Q9UNK9 670 aaKnown RBP6.97□□□□□ -1.29
SMAD3-209ENST00000558894 TTF2Q9UNY4 1162 aaKnown RBP6.97□□□□□ -1.29
SMAD3-209ENST00000558894 TNNQ9UQP3 1299 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 PTPRFP10586 1907 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 FOCADQ5VW36 1801 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 TESPA1A2RU30 521 aaPredicted RBP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 UNCXA6NJT0 531 aa6.96□□□□□ -1.3
SMAD3-209ENST00000558894 IGF2BP3O00425 579 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 CIAO1O76071 339 aa6.96□□□□□ -1.3
SMAD3-209ENST00000558894 TBC1D8O95759 1140 aa6.96□□□□□ -1.3
SMAD3-209ENST00000558894 HDLBPQ00341 1268 aaKnown RBP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 CAP1Q01518 475 aa6.96□□□□□ -1.3
SMAD3-209ENST00000558894 MKRN3Q13064 507 aaKnown RBP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 PUM3Q15397 648 aaKnown RBP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 NOM1Q5C9Z4 860 aaKnown RBP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 INTS3Q68E01 1043 aaKnown RBP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 APOBEC3HQ6NTF7 200 aaKnown RBP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 ZNF296Q8WUU4 475 aaPredicted RBP6.96□□□□□ -1.3
SMAD3-209ENST00000558894 ARHGAP45Q92619 1136 aa6.96□□□□□ -1.3
SMAD3-209ENST00000558894 WNK4Q96J92 1243 aa6.96□□□□□ -1.3
SMAD3-209ENST00000558894 MEIS3Q99687 375 aa6.96□□□□□ -1.3
SMAD3-209ENST00000558894 PTPN18Q99952 460 aa6.96□□□□□ -1.3
SMAD3-209ENST00000558894 COPRSQ9NQ92 184 aa6.96□□□□□ -1.3
SMAD3-209ENST00000558894 AK9Q5TCS8 1911 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 CUL9Q8IWT3 2517 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 SIPA1L1O43166 1804 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 ATAD5Q96QE3 1844 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 CCDC85CA6NKD9 419 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 ZBTB48P10074 688 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-209ENST00000558894 NF2P35240 595 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 MTX1Q13505 466 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 TTLL12Q14166 644 aaPredicted RBP6.95□□□□□ -1.3
SMAD3-209ENST00000558894 ARMC9Q7Z3E5 817 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 LPIN2Q92539 896 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 ZDHHC15Q96MV8 337 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 TMEM39BQ9GZU3 492 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 VEZTQ9HBM0 779 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 FBXO3Q9UK99 471 aa6.95□□□□□ -1.3
SMAD3-209ENST00000558894 PA2G4Q9UQ80 394 aaKnown RBP6.95□□□□□ -1.3
SMAD3-209ENST00000558894 LRRFIP2Q9Y608 721 aaKnown RBP6.95□□□□□ -1.3
SMAD3-209ENST00000558894 MGAMO43451 1857 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 TCP10L2B9ZVM9 353 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 GPR25O00155 361 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 MYO1BO43795 1136 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 BCAR3O75815 825 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 UBTFL1P0CB47 393 aaPredicted RBP6.94□□□□□ -1.3
SMAD3-209ENST00000558894 TRIM27P14373 513 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 RBM5P52756 815 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMAD3-209ENST00000558894 CACNB3P54284 484 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 CHAF1AQ13111 956 aaPredicted RBP6.94□□□□□ -1.3
SMAD3-209ENST00000558894 SUPT20HL1Q3ZLR7 823 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 CAVIN4Q5BKX8 364 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 HHIPL2Q6UWX4 724 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 CTU1Q7Z7A3 348 aaKnown RBP6.94□□□□□ -1.3
SMAD3-209ENST00000558894 IFNL1Q8IU54 200 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.94□□□□□ -1.36e-6■□□□□ 9
SMAD3-209ENST00000558894 TBC1D22AQ8WUA7 517 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 CNKSR2Q8WXI2 1034 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 MS4A4AQ96JQ5 239 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 API5Q9BZZ5 524 aaKnown RBP6.94□□□□□ -1.3
SMAD3-209ENST00000558894 SIL1Q9H173 461 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 RTN4Q9NQC3 1192 aaKnown RBP6.94□□□□□ -1.3
SMAD3-209ENST00000558894 MAST2Q6P0Q8 1798 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 SALL1Q9NSC2 1324 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 DOCK1Q14185 1865 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 RFX7Q2KHR2 1363 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 ATRNL1Q5VV63 1379 aa6.94□□□□□ -1.3
SMAD3-209ENST00000558894 MANSC4A6NHS7 340 aaPredicted RBP6.93□□□□□ -1.3
SMAD3-209ENST00000558894 PPP1R12BO60237 982 aaPredicted RBP6.93□□□□□ -1.3
SMAD3-209ENST00000558894 IFIT1P09914 478 aaKnown RBP6.93□□□□□ -1.3
SMAD3-209ENST00000558894 ADORA1P30542 326 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 IL15P40933 162 aaPredicted RBP6.93□□□□□ -1.3
SMAD3-209ENST00000558894 INHBEP58166 350 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 SREBF2Q12772 1141 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 VGLL4Q14135 290 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 DIXDC1Q155Q3 683 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 ATP2B3Q16720 1220 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 FKBP1CQ5VVH2 108 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 FAM83AQ86UY5 434 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 ANKRD13AQ8IZ07 590 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 MIER1Q8N108 512 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 ZNF384Q8TF68 577 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 TEKT1Q969V4 418 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 SLC10A4Q96EP9 437 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 SUGT1Q9Y2Z0 365 aa6.93□□□□□ -1.3
SMAD3-209ENST00000558894 RPAP1Q9BWH6 1393 aaPredicted RBP6.93□□□□□ -1.3
SMAD3-209ENST00000558894 PNMA6EA0A0J9YXQ4 647 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 SLC5A1P13866 664 aa6.92□□□□□ -1.3
SMAD3-209ENST00000558894 PRDX5P30044 214 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms