RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 WNK4Q96J92 1243 aa17■□□□□ 0.31
VPS18-203ENST00000558855 TMEM39BQ9GZU3 492 aa17■□□□□ 0.31
VPS18-203ENST00000558855 SIL1Q9H173 461 aa17■□□□□ 0.31
VPS18-203ENST00000558855 SERPINA10Q9UK55 444 aa17■□□□□ 0.31
VPS18-203ENST00000558855 PPP2R3BQ9Y5P8 575 aa17■□□□□ 0.31
VPS18-203ENST00000558855 LRRFIP2Q9Y608 721 aaKnown RBP17■□□□□ 0.31
VPS18-203ENST00000558855 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17■□□□□ 0.31
VPS18-203ENST00000558855 IGF2BP3O00425 579 aaKnown RBP eCLIP16.99■□□□□ 0.31
VPS18-203ENST00000558855 CNKSR2Q8WXI2 1034 aa16.99■□□□□ 0.31
VPS18-203ENST00000558855 MYH2Q9UKX2 1941 aa16.99■□□□□ 0.31
VPS18-203ENST00000558855 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
VPS18-203ENST00000558855 PUM3Q15397 648 aaKnown RBP16.98■□□□□ 0.31
VPS18-203ENST00000558855 MYO1BO43795 1136 aa16.97■□□□□ 0.31
VPS18-203ENST00000558855 RGS19P49795 217 aa16.97■□□□□ 0.31
VPS18-203ENST00000558855 CAP1Q01518 475 aa16.97■□□□□ 0.31
VPS18-203ENST00000558855 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
VPS18-203ENST00000558855 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
VPS18-203ENST00000558855 DOCK2Q92608 1830 aa16.96■□□□□ 0.31
VPS18-203ENST00000558855 GPR25O00155 361 aa16.96■□□□□ 0.31
VPS18-203ENST00000558855 ADORA1P30542 326 aa16.96■□□□□ 0.31
VPS18-203ENST00000558855 SOX10P56693 466 aa16.96■□□□□ 0.31
VPS18-203ENST00000558855 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
VPS18-203ENST00000558855 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
VPS18-203ENST00000558855 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.96■□□□□ 0.31
VPS18-203ENST00000558855 CTU1Q7Z7A3 348 aaKnown RBP16.96■□□□□ 0.31
VPS18-203ENST00000558855 VPS37DQ86XT2 251 aa16.96■□□□□ 0.31
VPS18-203ENST00000558855 SLC10A4Q96EP9 437 aa16.96■□□□□ 0.31
VPS18-203ENST00000558855 AK9Q5TCS8 1911 aa16.96■□□□□ 0.3
VPS18-203ENST00000558855 BCAR3O75815 825 aa16.95■□□□□ 0.3
VPS18-203ENST00000558855 CT47B1P0C2W7 299 aaPredicted RBP16.95■□□□□ 0.3
VPS18-203ENST00000558855 PHKA1P46020 1223 aa16.95■□□□□ 0.3
VPS18-203ENST00000558855 PTPN18Q99952 460 aa16.95■□□□□ 0.3
VPS18-203ENST00000558855 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
VPS18-203ENST00000558855 ELP3Q9H9T3 547 aa16.95■□□□□ 0.3
VPS18-203ENST00000558855 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
VPS18-203ENST00000558855 PPP1R12BO60237 982 aaPredicted RBP16.94■□□□□ 0.3
VPS18-203ENST00000558855 FRAT2O75474 233 aaPredicted RBP16.94■□□□□ 0.3
VPS18-203ENST00000558855 IFIT1P09914 478 aaKnown RBP16.94■□□□□ 0.3
VPS18-203ENST00000558855 SLC5A1P13866 664 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 PRDX5P30044 214 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 SREBF2Q12772 1141 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 DIXDC1Q155Q3 683 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 ATP2B3Q16720 1220 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 SUPT20HL1Q3ZLR7 823 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 IFNL1Q8IU54 200 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 LPIN2Q92539 896 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 ZDHHC15Q96MV8 337 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 CFHR5Q9BXR6 569 aa16.94■□□□□ 0.3
VPS18-203ENST00000558855 CIAO1O76071 339 aa16.93■□□□□ 0.3
VPS18-203ENST00000558855 ZBTB48P10074 688 aaPredicted RBP16.93■□□□□ 0.3
VPS18-203ENST00000558855 TRIM27P14373 513 aa16.93■□□□□ 0.3
VPS18-203ENST00000558855 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
VPS18-203ENST00000558855 TBC1D22AQ8WUA7 517 aa16.93■□□□□ 0.3
VPS18-203ENST00000558855 TEKT1Q969V4 418 aa16.93■□□□□ 0.3
VPS18-203ENST00000558855 HPS5Q9UPZ3 1129 aa16.93■□□□□ 0.3
VPS18-203ENST00000558855 MANSC4A6NHS7 340 aaPredicted RBP16.92■□□□□ 0.3
VPS18-203ENST00000558855 IREB2P48200 963 aaKnown RBP16.92■□□□□ 0.3
VPS18-203ENST00000558855 HDLBPQ00341 1268 aaKnown RBP16.92■□□□□ 0.3
VPS18-203ENST00000558855 VGLL4Q14135 290 aa16.92■□□□□ 0.3
VPS18-203ENST00000558855 ANKRD13AQ8IZ07 590 aa16.92■□□□□ 0.3
VPS18-203ENST00000558855 MIER1Q8N108 512 aa16.92■□□□□ 0.3
VPS18-203ENST00000558855 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.92■□□□□ 0.3
VPS18-203ENST00000558855 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
VPS18-203ENST00000558855 DAGLAQ9Y4D2 1042 aa16.92■□□□□ 0.3
VPS18-203ENST00000558855 CENPFP49454 3210 aa16.91■□□□□ 0.3
VPS18-203ENST00000558855 TNFAIP1Q13829 316 aa16.91■□□□□ 0.3
VPS18-203ENST00000558855 MS4A4AQ96JQ5 239 aa16.91■□□□□ 0.3
VPS18-203ENST00000558855 COPRSQ9NQ92 184 aa16.91■□□□□ 0.3
VPS18-203ENST00000558855 SNCAIPQ9Y6H5 919 aa16.91■□□□□ 0.3
VPS18-203ENST00000558855 MLLT1Q03111 559 aaPredicted RBP16.9■□□□□ 0.3
VPS18-203ENST00000558855 NFIAQ12857 509 aa16.9■□□□□ 0.3
VPS18-203ENST00000558855 NOM1Q5C9Z4 860 aaKnown RBP16.9■□□□□ 0.3
VPS18-203ENST00000558855 BRI3BPQ8WY22 251 aa16.9■□□□□ 0.3
VPS18-203ENST00000558855 CEP126Q9P2H0 1117 aa16.9■□□□□ 0.3
VPS18-203ENST00000558855 PHIPQ8WWQ0 1821 aa16.9■□□□□ 0.3
VPS18-203ENST00000558855 CDK5RAP2Q96SN8 1893 aa16.9■□□□□ 0.3
VPS18-203ENST00000558855 PNMA6EA0A0J9YXQ4 647 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 TESPA1A2RU30 521 aaPredicted RBP16.89■□□□□ 0.29
VPS18-203ENST00000558855 FKTNO75072 461 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 SLURP2P0DP57 97 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 TIMM10P62072 90 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 CRHR2Q13324 411 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 HHIPL2Q6UWX4 724 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 ARHGAP45Q92619 1136 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 ZKSCAN4Q969J2 545 aaPredicted RBP16.89■□□□□ 0.29
VPS18-203ENST00000558855 CLUAP1Q96AJ1 413 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 PTPRFP10586 1907 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 RBBP6Q7Z6E9 1792 aaKnown RBP16.89■□□□□ 0.29
VPS18-203ENST00000558855 RFX7Q2KHR2 1363 aa16.89■□□□□ 0.29
VPS18-203ENST00000558855 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.29
VPS18-203ENST00000558855 UNCXA6NJT0 531 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 IL15P40933 162 aaPredicted RBP16.88■□□□□ 0.29
VPS18-203ENST00000558855 TFCP2Q12800 502 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 MTX1Q13505 466 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 RASGRF1Q13972 1273 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 CCDC102BQ68D86 513 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 CDC42EP5Q6NZY7 148 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 ZFPM1Q8IX07 1006 aa16.88■□□□□ 0.29
VPS18-203ENST00000558855 WDR66Q8TBY9 1149 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms