RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-215ENST00000558787 PNMA8AQ86V59 439 aaPredicted RBP9.04□□□□□ -0.96
MARK3-215ENST00000558787 GRAPLQ8TC17 118 aaPredicted RBP9.04□□□□□ -0.96
MARK3-215ENST00000558787 TSR2Q969E8 191 aaKnown RBP9.04□□□□□ -0.96
MARK3-215ENST00000558787 RTFDC1Q9BY42 306 aaPredicted RBP9.04□□□□□ -0.96
MARK3-215ENST00000558787 ZNRF3Q9ULT6 936 aa9.04□□□□□ -0.96
MARK3-215ENST00000558787 LAMB2P55268 1798 aa9.04□□□□□ -0.96
MARK3-215ENST00000558787 ANKRD36CQ5JPF3 1778 aa9.04□□□□□ -0.96
MARK3-215ENST00000558787 COL4A1P02462 1669 aa9.04□□□□□ -0.96
MARK3-215ENST00000558787 LTBP1Q14766 1721 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 SHTN1A0MZ66 631 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 TMEM88BA6NKF7 163 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 TRAF5O00463 557 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 IRS4O14654 1257 aaPredicted RBP9.03□□□□□ -0.96
MARK3-215ENST00000558787 DXOO77932 396 aaKnown RBP9.03□□□□□ -0.96
MARK3-215ENST00000558787 VEGFBP49765 207 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 GMPSP49915 693 aaPredicted RBP9.03□□□□□ -0.96
MARK3-215ENST00000558787 GPSM2P81274 684 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 HLA-CQ95604 372 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 GPR101Q96P66 508 aaPredicted RBP9.03□□□□□ -0.96
MARK3-215ENST00000558787 CCDC85AQ96PX6 553 aaPredicted RBP9.03□□□□□ -0.96
MARK3-215ENST00000558787 MYD88Q99836 296 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 SEC31BQ9NQW1 1179 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 TOR4AQ9NXH8 423 aa9.03□□□□□ -0.96
MARK3-215ENST00000558787 YDJCA8MPS7 323 aa9.02□□□□□ -0.97
MARK3-215ENST00000558787 CALD1Q05682 793 aaKnown RBP9.02□□□□□ -0.97
MARK3-215ENST00000558787 KIAA2012Q0VF49 1180 aa9.02□□□□□ -0.97
MARK3-215ENST00000558787 TRIM28Q13263 835 aaKnown RBP9.02□□□□□ -0.97
MARK3-215ENST00000558787 SF3B3Q15393 1217 aaKnown RBP9.02□□□□□ -0.97
MARK3-215ENST00000558787 SUPT20HQ8NEM7 779 aa9.02□□□□□ -0.97
MARK3-215ENST00000558787 KCNQ5Q9NR82 932 aa9.02□□□□□ -0.97
MARK3-215ENST00000558787 GPRC5DQ9NZD1 345 aa9.02□□□□□ -0.97
MARK3-215ENST00000558787 NSFL1CQ9UNZ2 370 aaKnown RBP9.02□□□□□ -0.97
MARK3-215ENST00000558787 ADAMTSL1Q8N6G6 1762 aa9.01□□□□□ -0.97
MARK3-215ENST00000558787 CNTNAP1P78357 1384 aa9.01□□□□□ -0.97
MARK3-215ENST00000558787 TTC24A2A3L6 582 aaPredicted RBP9.01□□□□□ -0.97
MARK3-215ENST00000558787 C6orf229H3BNL8 230 aa9.01□□□□□ -0.97
MARK3-215ENST00000558787 TRIM32Q13049 653 aa9.01□□□□□ -0.97
MARK3-215ENST00000558787 CIAPIN1Q6FI81 312 aa9.01□□□□□ -0.97
MARK3-215ENST00000558787 G2E3Q7L622 706 aa9.01□□□□□ -0.97
MARK3-215ENST00000558787 DDX60Q8IY21 1712 aaKnown RBP9.01□□□□□ -0.97
MARK3-215ENST00000558787 VPS33BQ9H267 617 aa9.01□□□□□ -0.97
MARK3-215ENST00000558787 DBNDD1Q9H9R9 158 aa9.01□□□□□ -0.97
MARK3-215ENST00000558787 POLLQ9UGP5 575 aa9.01□□□□□ -0.97
MARK3-215ENST00000558787 ABT1Q9ULW3 272 aaKnown RBP9.01□□□□□ -0.97
MARK3-215ENST00000558787 WTIPA6NIX2 430 aaPredicted RBP9□□□□□ -0.97
MARK3-215ENST00000558787 WNT7AO00755 349 aa9□□□□□ -0.97
MARK3-215ENST00000558787 FOXN1O15353 648 aa9□□□□□ -0.97
MARK3-215ENST00000558787 SSTR3P32745 418 aaPredicted RBP9□□□□□ -0.97
MARK3-215ENST00000558787 HIRAP54198 1017 aaPredicted RBP9□□□□□ -0.97
MARK3-215ENST00000558787 RPS8P62241 208 aaKnown RBP9□□□□□ -0.97
MARK3-215ENST00000558787 GUCA2AQ02747 115 aa9□□□□□ -0.97
MARK3-215ENST00000558787 WASHC4Q2M389 1173 aa9□□□□□ -0.97
MARK3-215ENST00000558787 DEFB115Q30KQ5 88 aa9□□□□□ -0.97
MARK3-215ENST00000558787 CCDC30Q5VVM6 783 aa9□□□□□ -0.97
MARK3-215ENST00000558787 CST9Q5W186 159 aa9□□□□□ -0.97
MARK3-215ENST00000558787 DLK2Q6UY11 383 aa9□□□□□ -0.97
MARK3-215ENST00000558787 USP50Q70EL3 339 aaPredicted RBP9□□□□□ -0.97
MARK3-215ENST00000558787 WWC1Q8IX03 1113 aa9□□□□□ -0.97
MARK3-215ENST00000558787 TNS4Q8IZW8 715 aa9□□□□□ -0.97
MARK3-215ENST00000558787 ZBTB38Q8NAP3 1195 aaPredicted RBP9□□□□□ -0.97
MARK3-215ENST00000558787 TRPM4Q8TD43 1214 aa9□□□□□ -0.97
MARK3-215ENST00000558787 METTL22Q9BUU2 404 aaPredicted RBP9□□□□□ -0.97
MARK3-215ENST00000558787 BCL2L13Q9BXK5 485 aa9□□□□□ -0.97
MARK3-215ENST00000558787 GLIS2Q9BZE0 524 aaPredicted RBP9□□□□□ -0.97
MARK3-215ENST00000558787 AAASQ9NRG9 546 aa9□□□□□ -0.97
MARK3-215ENST00000558787 ADARB2Q9NS39 739 aaKnown RBP9□□□□□ -0.97
MARK3-215ENST00000558787 CNOT7Q9UIV1 285 aaKnown RBP9□□□□□ -0.97
MARK3-215ENST00000558787 MAP3K2Q9Y2U5 619 aa9□□□□□ -0.97
MARK3-215ENST00000558787 DUOX1Q9NRD9 1551 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 PI4KAP2A4QPH2 592 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 PSMD14O00487 310 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 ST8SIA5O15466 376 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 PCCAP05165 728 aaPredicted RBP8.99□□□□□ -0.97
MARK3-215ENST00000558787 IGKV5-2P06315 115 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 GRM1Q13255 1194 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 TNIP1Q15025 636 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 TMC4Q7Z404 712 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 PI4KAP1Q8N8J0 262 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 CCDC191Q8NCU4 936 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 TBC1D16Q8TBP0 767 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
MARK3-215ENST00000558787 MRS2Q9HD23 443 aa8.99□□□□□ -0.97
MARK3-215ENST00000558787 CWC25Q9NXE8 425 aaPredicted RBP8.99□□□□□ -0.97
MARK3-215ENST00000558787 RASSF10A6NK89 507 aa8.98□□□□□ -0.97
MARK3-215ENST00000558787 PDE8AO60658 829 aa8.98□□□□□ -0.97
MARK3-215ENST00000558787 ZMYND10O75800 440 aa8.98□□□□□ -0.97
MARK3-215ENST00000558787 EGFRP00533 1210 aa8.98□□□□□ -0.97
MARK3-215ENST00000558787 AVPP01185 164 aa8.98□□□□□ -0.97
MARK3-215ENST00000558787 TTLL12Q14166 644 aaPredicted RBP8.98□□□□□ -0.97
MARK3-215ENST00000558787 CWF19L2Q2TBE0 894 aaKnown RBP8.98□□□□□ -0.97
MARK3-215ENST00000558787 TWISTNBQ3B726 338 aaPredicted RBP8.98□□□□□ -0.97
MARK3-215ENST00000558787 TBC1D10BQ4KMP7 808 aaPredicted RBP8.98□□□□□ -0.97
MARK3-215ENST00000558787 KSR2Q6VAB6 950 aa8.98□□□□□ -0.97
MARK3-215ENST00000558787 ANKIB1Q9P2G1 1089 aa8.98□□□□□ -0.97
MARK3-215ENST00000558787 AXIN1O15169 862 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 ECE2O60344 883 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 UFL1O94874 794 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 DDX58O95786 925 aaKnown RBP8.97□□□□□ -0.97
MARK3-215ENST00000558787 FDX1P10109 184 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 JUNDP17535 347 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms