RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 WDR63Q8IWG1 891 aa9.66□□□□□ -0.86
SPG11-205ENST00000558080 VPS33BQ9H267 617 aa9.66□□□□□ -0.86
SPG11-205ENST00000558080 PKD2L1Q9P0L9 805 aa9.66□□□□□ -0.86
SPG11-205ENST00000558080 ZNRF3Q9ULT6 936 aa9.66□□□□□ -0.86
SPG11-205ENST00000558080 NSFL1CQ9UNZ2 370 aaKnown RBP9.66□□□□□ -0.86
SPG11-205ENST00000558080 C6orf229H3BNL8 230 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 PDE8AO60658 829 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 RAD17O75943 681 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 IGKV5-2P06315 115 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 HSP90B1P14625 803 aaKnown RBP9.65□□□□□ -0.86
SPG11-205ENST00000558080 FECHP22830 423 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 RPIAP49247 311 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 CXCL9Q07325 125 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 KIAA2012Q0VF49 1180 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 NEXNQ0ZGT2 675 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 CWF19L2Q2TBE0 894 aaKnown RBP9.65□□□□□ -0.86
SPG11-205ENST00000558080 MAP1SQ66K74 1059 aaPredicted RBP9.65□□□□□ -0.86
SPG11-205ENST00000558080 PNMA8AQ86V59 439 aaPredicted RBP9.65□□□□□ -0.86
SPG11-205ENST00000558080 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
SPG11-205ENST00000558080 VAMP4O75379 141 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 GMPSP49915 693 aaPredicted RBP9.64□□□□□ -0.87
SPG11-205ENST00000558080 SCNN1DP51172 638 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 FLIIQ13045 1269 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 WASHC4Q2M389 1173 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 CCDC152Q4G0S7 254 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 CIAPIN1Q6FI81 312 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 SMYD5Q6GMV2 418 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 CNTROBQ8N137 903 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 GPR101Q96P66 508 aaPredicted RBP9.64□□□□□ -0.87
SPG11-205ENST00000558080 POLLQ9UGP5 575 aa9.64□□□□□ -0.87
SPG11-205ENST00000558080 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
SPG11-205ENST00000558080 PASKQ96RG2 1323 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 YDJCA8MPS7 323 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 NEURL1BA8MQ27 555 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 FUT2Q10981 343 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 FKBP5Q13451 457 aaPredicted RBP9.63□□□□□ -0.87
SPG11-205ENST00000558080 TNIP1Q15025 636 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 RDH13Q8NBN7 331 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 BCL2L13Q9BXK5 485 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 DBNDD1Q9H9R9 158 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 AAASQ9NRG9 546 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 GPRC5DQ9NZD1 345 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 A0A1B0GUL6 1792 aa9.63□□□□□ -0.87
SPG11-205ENST00000558080 CDHR2Q9BYE9 1310 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 CTSWP56202 376 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 FMR1Q06787 632 aaKnown RBP eCLIP9.62□□□□□ -0.87
SPG11-205ENST00000558080 UBE3BQ7Z3V4 1068 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 ANKRD18AQ8IVF6 992 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 CRIPAKQ8N1N5 446 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 TBC1D16Q8TBP0 767 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 DNAAF4Q8WXU2 420 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 EYA3Q99504 573 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 KCNQ5Q9NR82 932 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 ANKIB1Q9P2G1 1089 aa9.62□□□□□ -0.87
SPG11-205ENST00000558080 PCNTO95613 3336 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 SHTN1A0MZ66 631 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 TMEM88BA6NKF7 163 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 H7C1W4 665 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 PSMD14O00487 310 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 ST8SIA5O15466 376 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 ECE2O60344 883 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 UFL1O94874 794 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 FOXC1Q12948 553 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 GCKRQ14397 625 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 USP50Q70EL3 339 aaPredicted RBP9.61□□□□□ -0.87
SPG11-205ENST00000558080 TTLL11Q8NHH1 800 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 YTHDC1Q96MU7 727 aaKnown RBP9.61□□□□□ -0.87
SPG11-205ENST00000558080 MYH16Q9H6N6 1097 aa9.61□□□□□ -0.87
SPG11-205ENST00000558080 ADARB2Q9NS39 739 aaKnown RBP9.61□□□□□ -0.87
SPG11-205ENST00000558080 CNOT7Q9UIV1 285 aaKnown RBP9.61□□□□□ -0.87
SPG11-205ENST00000558080 FCF1Q9Y324 198 aaKnown RBP9.61□□□□□ -0.87
SPG11-205ENST00000558080 DDX11L8A8MPP1 907 aa9.6□□□□□ -0.87
SPG11-205ENST00000558080 F6X3S4 739 aa9.6□□□□□ -0.87
SPG11-205ENST00000558080 FMNL1O95466 1100 aaPredicted RBP9.6□□□□□ -0.87
SPG11-205ENST00000558080 GCGRP47871 477 aa9.6□□□□□ -0.87
SPG11-205ENST00000558080 SULF1Q8IWU6 871 aa9.6□□□□□ -0.87
SPG11-205ENST00000558080 FAM160A2Q8N612 972 aaPredicted RBP9.6□□□□□ -0.87
SPG11-205ENST00000558080 LINS1Q8NG48 757 aa9.6□□□□□ -0.87
SPG11-205ENST00000558080 CDC5LQ99459 802 aaKnown RBP9.6□□□□□ -0.87
SPG11-205ENST00000558080 ZC3H12CQ9C0D7 883 aaKnown RBP9.6□□□□□ -0.87
SPG11-205ENST00000558080 GREM2Q9H772 168 aa9.6□□□□□ -0.87
SPG11-205ENST00000558080 PODXL2Q9NZ53 605 aa9.6□□□□□ -0.87
SPG11-205ENST00000558080 GGA1Q9UJY5 639 aa9.6□□□□□ -0.87
SPG11-205ENST00000558080 SLC27A5Q9Y2P5 690 aa9.6□□□□□ -0.87
SPG11-205ENST00000558080 ZNF646O15015 1829 aaPredicted RBP9.6□□□□□ -0.87
SPG11-205ENST00000558080 WTIPA6NIX2 430 aaPredicted RBP9.59□□□□□ -0.87
SPG11-205ENST00000558080 H7C1D1 291 aa9.59□□□□□ -0.87
SPG11-205ENST00000558080 TRAF5O00463 557 aa9.59□□□□□ -0.87
SPG11-205ENST00000558080 AVPP01185 164 aa9.59□□□□□ -0.87
SPG11-205ENST00000558080 HIRAP54198 1017 aaPredicted RBP9.59□□□□□ -0.87
SPG11-205ENST00000558080 TRPM4Q8TD43 1214 aa9.59□□□□□ -0.87
SPG11-205ENST00000558080 TOR4AQ9NXH8 423 aa9.59□□□□□ -0.87
SPG11-205ENST00000558080 CNTNAP1P78357 1384 aa9.59□□□□□ -0.87
SPG11-205ENST00000558080 XDHP47989 1333 aa9.58□□□□□ -0.88
SPG11-205ENST00000558080 CD2BP2O95400 341 aaKnown RBP9.58□□□□□ -0.88
SPG11-205ENST00000558080 HSPA1AP0DMV8 641 aaKnown RBP9.58□□□□□ -0.88
SPG11-205ENST00000558080 HSPA1BP0DMV9 641 aaKnown RBP9.58□□□□□ -0.88
SPG11-205ENST00000558080 ATP2B4P23634 1241 aa9.58□□□□□ -0.88
SPG11-205ENST00000558080 VEGFBP49765 207 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms