RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 NBPF10Q6P3W6 841 aaKnown RBP7.73□□□□□ -1.17
TRPM1-204ENST00000557948 POTEHQ6S545 545 aa7.73□□□□□ -1.17
TRPM1-204ENST00000557948 PPP1R42Q7Z4L9 355 aa7.73□□□□□ -1.17
TRPM1-204ENST00000557948 NECAB2Q7Z6G3 386 aa7.73□□□□□ -1.17
TRPM1-204ENST00000557948 MYLIPQ8WY64 445 aa7.73□□□□□ -1.17
TRPM1-204ENST00000557948 PAWRQ96IZ0 340 aaKnown RBP7.73□□□□□ -1.17
TRPM1-204ENST00000557948 KDM4CQ9H3R0 1056 aa7.73□□□□□ -1.17
TRPM1-204ENST00000557948 FAM205AQ6ZU69 1335 aa7.73□□□□□ -1.17
TRPM1-204ENST00000557948 BTBD11A6QL63 1104 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 KCNQ3O43525 872 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 SNRPA1P09661 255 aaKnown RBP7.72□□□□□ -1.17
TRPM1-204ENST00000557948 GRAPQ13588 217 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 MAP3K11Q16584 847 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 KIF6Q6ZMV9 814 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 APOBEC3FQ8IUX4 373 aaKnown RBP7.72□□□□□ -1.17
TRPM1-204ENST00000557948 NGEFQ8N5V2 710 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 IL27Q8NEV9 243 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 GRAPLQ8TC17 118 aaPredicted RBP7.72□□□□□ -1.17
TRPM1-204ENST00000557948 ADAMTS19Q8TE59 1207 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 SIN3AQ96ST3 1273 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 ZC3H12CQ9C0D7 883 aaKnown RBP7.72□□□□□ -1.17
TRPM1-204ENST00000557948 UNC93B1Q9H1C4 597 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 SEMA6BQ9H3T3 888 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 POLLQ9UGP5 575 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 SRRDQ9UH36 339 aa7.72□□□□□ -1.17
TRPM1-204ENST00000557948 COL2A1P02458 1487 aaPredicted RBP7.71□□□□□ -1.18
TRPM1-204ENST00000557948 UNCXA6NJT0 531 aa7.71□□□□□ -1.18
TRPM1-204ENST00000557948 GJA5P36382 358 aa7.71□□□□□ -1.18
TRPM1-204ENST00000557948 SLC10A5Q5PT55 438 aa7.71□□□□□ -1.18
TRPM1-204ENST00000557948 OGFOD1Q8N543 542 aa7.71□□□□□ -1.18
TRPM1-204ENST00000557948 PTCD2Q8WV60 388 aaKnown RBP7.71□□□□□ -1.18
TRPM1-204ENST00000557948 UHRF1Q96T88 793 aaPredicted RBP7.71□□□□□ -1.18
TRPM1-204ENST00000557948 MAP3K15Q6ZN16 1313 aa7.71□□□□□ -1.18
TRPM1-204ENST00000557948 CCL15-CCL14A0A0B4J2E2 113 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 WNT10BO00744 389 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 TLR2O60603 784 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 FMNL1O95466 1100 aaPredicted RBP7.7□□□□□ -1.18
TRPM1-204ENST00000557948 HMOX1P09601 288 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 IL13P35225 146 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 PSMC4P43686 418 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 IREB2P48200 963 aaKnown RBP7.7□□□□□ -1.18
TRPM1-204ENST00000557948 CCL15Q16663 113 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 ZNF34Q8IZ26 560 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 IL17REQ8NFR9 667 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 DEFB118Q96PH6 123 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 GMLQ99445 158 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 UTP14AQ9BVJ6 771 aaKnown RBP7.7□□□□□ -1.18
TRPM1-204ENST00000557948 MYPNQ86TC9 1320 aa7.7□□□□□ -1.18
TRPM1-204ENST00000557948 COL1A1P02452 1464 aaPredicted RBP7.69□□□□□ -1.18
TRPM1-204ENST00000557948 GNAT3A8MTJ3 354 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 IRF6O14896 467 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 MRE11P49959 708 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 GPSM2P81274 684 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 MAP2K5Q13163 448 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 PARP10Q53GL7 1025 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 ANKRD13AQ8IZ07 590 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 FAM43AQ8N2R8 423 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 SLAIN1Q8ND83 568 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 HELBQ8NG08 1087 aaPredicted RBP7.69□□□□□ -1.18
TRPM1-204ENST00000557948 DIS3LQ8TF46 1054 aaKnown RBP7.69□□□□□ -1.18
TRPM1-204ENST00000557948 ATXN2LQ8WWM7 1075 aaKnown RBP7.69□□□□□ -1.18
TRPM1-204ENST00000557948 BRI3BPQ8WY22 251 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 OPTNQ96CV9 577 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 LRFN3Q9BTN0 628 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 ZBTB3Q9H5J0 574 aa7.69□□□□□ -1.18
TRPM1-204ENST00000557948 OTOFQ9HC10 1997 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 USP17L3A6NCW0 530 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 USP17L4A6NCW7 530 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 SASH1O94885 1247 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 NEFLP07196 543 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 GTF2A2P52657 109 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 MDM2Q00987 491 aaPredicted RBP7.68□□□□□ -1.18
TRPM1-204ENST00000557948 USP17L1Q7RTZ2 530 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 TBC1D16Q8TBP0 767 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 ASB2Q96Q27 587 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 CDH23Q9H251 3354 aa7.68□□□□□ -1.18
TRPM1-204ENST00000557948 MGAMO43451 1857 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 HCLS1P14317 486 aaPredicted RBP7.67□□□□□ -1.18
TRPM1-204ENST00000557948 PTGDRQ13258 359 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 HIC1Q14526 733 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 SUPT20HL1Q3ZLR7 823 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 TTLL7Q6ZT98 887 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 USP38Q8NB14 1042 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 NBPF3Q9H094 633 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 DEFB129Q9H1M3 183 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 ELP3Q9H9T3 547 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 CDHR5Q9HBB8 845 aa7.67□□□□□ -1.18
TRPM1-204ENST00000557948 TCF20Q9UGU0 1960 aaKnown RBP7.67□□□□□ -1.18
TRPM1-204ENST00000557948 DDX60LQ5H9U9 1706 aaKnown RBP7.66□□□□□ -1.18
TRPM1-204ENST00000557948 INHAP05111 366 aa7.66□□□□□ -1.18
TRPM1-204ENST00000557948 CTGFP29279 349 aa7.66□□□□□ -1.18
TRPM1-204ENST00000557948 PRKCZQ05513 592 aa7.66□□□□□ -1.18
TRPM1-204ENST00000557948 TMEM31Q5JXX7 168 aa7.66□□□□□ -1.18
TRPM1-204ENST00000557948 GIGYF2Q6Y7W6 1299 aaKnown RBP7.66□□□□□ -1.18
TRPM1-204ENST00000557948 ANKLE1Q8NAG6 615 aa7.66□□□□□ -1.18
TRPM1-204ENST00000557948 FAM117AQ9C073 453 aa7.66□□□□□ -1.18
TRPM1-204ENST00000557948 TTYH1Q9H313 450 aaPredicted RBP7.66□□□□□ -1.18
TRPM1-204ENST00000557948 THEGQ9P2T0 379 aa7.66□□□□□ -1.18
TRPM1-204ENST00000557948 ADGRA2Q96PE1 1338 aa7.66□□□□□ -1.18
TRPM1-204ENST00000557948 ADCY3O60266 1144 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms