RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	VEGFB	P49765	207 aa		11.99	□□□□□ -0.49
RPS29-208	ENST00000557519	TTLL12	Q14166	644 aa	Predicted RBP	11.99	□□□□□ -0.49
RPS29-208	ENST00000557519	SUPT20HL1	Q3ZLR7	823 aa		11.99	□□□□□ -0.49
RPS29-208	ENST00000557519	CCDC102B	Q68D86	513 aa		11.99	□□□□□ -0.49
RPS29-208	ENST00000557519	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.99	□□□□□ -0.49
RPS29-208	ENST00000557519	ZBED3	Q96IU2	234 aa	Predicted RBP	11.99	□□□□□ -0.49
RPS29-208	ENST00000557519	CAPNS2	Q96L46	248 aa		11.99	□□□□□ -0.49
RPS29-208	ENST00000557519	MRI	Q9BWK5	157 aa		11.99	□□□□□ -0.49
RPS29-208	ENST00000557519	WDR33	Q9C0J8	1336 aa	Known RBP	11.99	□□□□□ -0.49
RPS29-208	ENST00000557519	SALL1	Q9NSC2	1324 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	UQCRFS1P1	P0C7P4	283 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	CRK	P46108	304 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	GRM1	Q13255	1194 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	CCDC158	Q5M9N0	1113 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	CEP85	Q6P2H3	762 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	ARMC9	Q7Z3E5	817 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	CCDC102A	Q96A19	550 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	HOOK2	Q96ED9	719 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	XAGE2	Q96GT9	111 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	COG6	Q9Y2V7	657 aa		11.98	□□□□□ -0.49
RPS29-208	ENST00000557519	ASTN2	O75129	1339 aa	Predicted RBP	11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	PPP1R12B	O60237	982 aa	Predicted RBP	11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	MAP2K2	P36507	400 aa		11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	FMR1	Q06787	632 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	NOG	Q13253	232 aa		11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	RGMB	Q6NW40	437 aa		11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	HHIPL2	Q6UWX4	724 aa		11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	DZIP1	Q86YF9	867 aa	Known RBP	11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	DEFB129	Q9H1M3	183 aa		11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	NOP58	Q9Y2X3	529 aa	Known RBP	11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	THSD7B	Q9C0I4	1608 aa		11.97	□□□□□ -0.49
RPS29-208	ENST00000557519	CLRN2	A0PK11	232 aa		11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	IGSF3	O75054	1194 aa		11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	PHKA1	P46020	1223 aa		11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	ZNF157	P51786	506 aa	Predicted RBP	11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	TIMM10	P62072	90 aa		11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	SPDYE2	Q495Y8	402 aa		11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	TTC39A	Q5SRH9	613 aa		11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	CYP4F22	Q6NT55	531 aa		11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	REM2	Q8IYK8	340 aa	Predicted RBP	11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	ZDHHC15	Q96MV8	337 aa		11.96	□□□□□ -0.49
RPS29-208	ENST00000557519	UNCX	A6NJT0	531 aa		11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	CA12	O43570	354 aa		11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	HSPA1A	P0DMV8	641 aa	Known RBP	11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	HSPA1B	P0DMV9	641 aa	Known RBP	11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	ADORA1	P30542	326 aa		11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	GSTO1	P78417	241 aa		11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	TNNI3K	Q59H18	835 aa		11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	ERICH6	Q7L0X2	663 aa		11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	PRMT6	Q96LA8	375 aa	Predicted RBP	11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	ZBTB40	Q9NUA8	1239 aa		11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	ZNF70	Q9UC06	446 aa	Predicted RBP	11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	ABCF2	Q9UG63	623 aa		11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	FPGT-TNNI3K	V9GXZ4	949 aa		11.95	□□□□□ -0.5
RPS29-208	ENST00000557519	RAB11FIP3	O75154	756 aa		11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	LDHC	P07864	332 aa		11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	ARID4A	P29374	1257 aa	Predicted RBP	11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	IREB2	P48200	963 aa	Known RBP	11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	RASGRF1	Q13972	1273 aa		11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	FKBP1C	Q5VVH2	108 aa		11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	CLASRP	Q8N2M8	674 aa	Known RBP	11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	SPATA5	Q8NB90	893 aa		11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	KIF1BP	Q96EK5	621 aa		11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	NOL10	Q9BSC4	688 aa	Known RBP	11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	TDRD3	Q9H7E2	651 aa	Known RBP	11.94	□□□□□ -0.5
RPS29-208	ENST00000557519	CTCF	P49711	727 aa	Predicted RBP	11.93	□□□□□ -0.5
RPS29-208	ENST00000557519	RASA3	Q14644	834 aa		11.93	□□□□□ -0.5
RPS29-208	ENST00000557519	FAM83A	Q86UY5	434 aa		11.93	□□□□□ -0.5
RPS29-208	ENST00000557519	EXOC6B	Q9Y2D4	811 aa		11.93	□□□□□ -0.5
RPS29-208	ENST00000557519	MYH2	Q9UKX2	1941 aa		11.93	□□□□□ -0.5
RPS29-208	ENST00000557519	TCP10L2	B9ZVM9	353 aa		11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	MAP4K4	O95819	1239 aa	Predicted RBP	11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	SLC10A3	P09131	477 aa		11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	PRDX5	P30044	214 aa		11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	RRP1	P56182	461 aa	Known RBP	11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	DCAF15	Q66K64	600 aa		11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	TMED8	Q6PL24	325 aa	Predicted RBP	11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	LRP2BP	Q9P2M1	347 aa		11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	ANGEL1	Q9UNK9	670 aa	Known RBP	11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	MAST2	Q6P0Q8	1798 aa		11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.92	□□□□□ -0.5
RPS29-208	ENST00000557519	IFIT2	P09913	472 aa	Known RBP	11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	PRAMEF18	Q5VWM3	479 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	DLK2	Q6UY11	383 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	AACS	Q86V21	672 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	RHPN1	Q8TCX5	695 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	WBP1L	Q9NX94	342 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	RAI14	Q9P0K7	980 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	HMG20B	Q9P0W2	317 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	SCAF8	Q9UPN6	1271 aa	Known RBP	11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	DAGLA	Q9Y4D2	1042 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	AK9	Q5TCS8	1911 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	PCNT	O95613	3336 aa		11.91	□□□□□ -0.5
RPS29-208	ENST00000557519	AKAP11	Q9UKA4	1901 aa		11.9	□□□□□ -0.5
RPS29-208	ENST00000557519	UBE2Q2L	H0YL09	131 aa		11.9	□□□□□ -0.5
RPS29-208	ENST00000557519	AOC2	O75106	756 aa		11.9	□□□□□ -0.5
RPS29-208	ENST00000557519	PLCG2	P16885	1265 aa		11.9	□□□□□ -0.5
RPS29-208	ENST00000557519	SREBF2	Q12772	1141 aa		11.9	□□□□□ -0.5
RPS29-208	ENST00000557519	AAMP	Q13685	434 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms