RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 SEC24BO95487 1268 aa13.28□□□□□ -0.28
PSMC6-215ENST00000557517 SLC10A3P09131 477 aa13.28□□□□□ -0.28
PSMC6-215ENST00000557517 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
PSMC6-215ENST00000557517 DLGAP5Q15398 846 aa13.28□□□□□ -0.28
PSMC6-215ENST00000557517 PRMT6Q96LA8 375 aaPredicted RBP13.28□□□□□ -0.28
PSMC6-215ENST00000557517 CSRNP1Q96S65 589 aa13.28□□□□□ -0.28
PSMC6-215ENST00000557517 API5Q9BZZ5 524 aaKnown RBP13.28□□□□□ -0.28
PSMC6-215ENST00000557517 SAGE1Q9NXZ1 904 aa13.28□□□□□ -0.28
PSMC6-215ENST00000557517 AKAP11Q9UKA4 1901 aa13.28□□□□□ -0.28
PSMC6-215ENST00000557517 POLR2AP24928 1970 aaKnown RBP13.27□□□□□ -0.28
PSMC6-215ENST00000557517 POTEFA5A3E0 1075 aa13.27□□□□□ -0.29
PSMC6-215ENST00000557517 PTPN12Q05209 780 aaKnown RBP13.27□□□□□ -0.29
PSMC6-215ENST00000557517 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.29
PSMC6-215ENST00000557517 APOBEC3FQ8IUX4 373 aaKnown RBP13.27□□□□□ -0.29
PSMC6-215ENST00000557517 KLHDC4Q8TBB5 520 aa13.27□□□□□ -0.29
PSMC6-215ENST00000557517 DEFB129Q9H1M3 183 aa13.27□□□□□ -0.29
PSMC6-215ENST00000557517 CACNA1FO60840 1977 aa13.27□□□□□ -0.29
PSMC6-215ENST00000557517 UBE2Q2LH0YL09 131 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 EYA2O00167 538 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 FGFR2P21802 821 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 CFAP100Q494V2 611 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 LDLRAD1Q5T700 205 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 MOB2Q70IA6 237 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 PCDHAC2Q9Y5I4 1007 aa13.26□□□□□ -0.29
PSMC6-215ENST00000557517 KIF16BQ96L93 1317 aa13.25□□□□□ -0.29
PSMC6-215ENST00000557517 F8W031 263 aaPredicted RBP13.25□□□□□ -0.29
PSMC6-215ENST00000557517 SOX10P56693 466 aa13.25□□□□□ -0.29
PSMC6-215ENST00000557517 CAVIN4Q5BKX8 364 aa13.25□□□□□ -0.29
PSMC6-215ENST00000557517 MFSD14BQ5SR56 506 aa13.25□□□□□ -0.29
PSMC6-215ENST00000557517 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
PSMC6-215ENST00000557517 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
PSMC6-215ENST00000557517 RNF186Q9NXI6 227 aa13.25□□□□□ -0.29
PSMC6-215ENST00000557517 SERPINA10Q9UK55 444 aa13.25□□□□□ -0.29
PSMC6-215ENST00000557517 JAG2Q9Y219 1238 aa13.25□□□□□ -0.29
PSMC6-215ENST00000557517 PPP2R3BQ9Y5P8 575 aa13.25□□□□□ -0.29
PSMC6-215ENST00000557517 MYO1BO43795 1136 aa13.24□□□□□ -0.29
PSMC6-215ENST00000557517 UBTFL1P0CB47 393 aaPredicted RBP13.24□□□□□ -0.29
PSMC6-215ENST00000557517 NF2P35240 595 aa13.24□□□□□ -0.29
PSMC6-215ENST00000557517 BCAMP50895 628 aa13.24□□□□□ -0.29
PSMC6-215ENST00000557517 HDLBPQ00341 1268 aaKnown RBP13.24□□□□□ -0.29
PSMC6-215ENST00000557517 MAP3K11Q16584 847 aa13.24□□□□□ -0.29
PSMC6-215ENST00000557517 RASAL3Q86YV0 1011 aa13.24□□□□□ -0.29
PSMC6-215ENST00000557517 UNCXA6NJT0 531 aa13.23□□□□□ -0.29
PSMC6-215ENST00000557517 CIAO1O76071 339 aa13.23□□□□□ -0.29
PSMC6-215ENST00000557517 TM4SF4P48230 202 aa13.23□□□□□ -0.29
PSMC6-215ENST00000557517 PUM3Q15397 648 aaKnown RBP13.23□□□□□ -0.29
PSMC6-215ENST00000557517 VPS37DQ86XT2 251 aa13.23□□□□□ -0.29
PSMC6-215ENST00000557517 TBC1D22AQ8WUA7 517 aa13.23□□□□□ -0.29
PSMC6-215ENST00000557517 LPIN2Q92539 896 aa13.23□□□□□ -0.29
PSMC6-215ENST00000557517 TTF2Q9UNY4 1162 aaKnown RBP13.23□□□□□ -0.29
PSMC6-215ENST00000557517 AOX1Q06278 1338 aa13.22□□□□□ -0.29
PSMC6-215ENST00000557517 MYH3P11055 1940 aa13.22□□□□□ -0.29
PSMC6-215ENST00000557517 IPO8O15397 1037 aaKnown RBP13.22□□□□□ -0.29
PSMC6-215ENST00000557517 IFIT1P09914 478 aaKnown RBP13.22□□□□□ -0.29
PSMC6-215ENST00000557517 GRIK5Q16478 980 aa13.22□□□□□ -0.29
PSMC6-215ENST00000557517 SUPT20HL1Q3ZLR7 823 aa13.22□□□□□ -0.29
PSMC6-215ENST00000557517 ARMC9Q7Z3E5 817 aa13.22□□□□□ -0.29
PSMC6-215ENST00000557517 DZIP1LQ8IYY4 767 aaKnown RBP13.22□□□□□ -0.29
PSMC6-215ENST00000557517 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
PSMC6-215ENST00000557517 SUGT1Q9Y2Z0 365 aa13.22□□□□□ -0.29
PSMC6-215ENST00000557517 CLRN2A0PK11 232 aa13.21□□□□□ -0.29
PSMC6-215ENST00000557517 TRPA1O75762 1119 aa13.21□□□□□ -0.29
PSMC6-215ENST00000557517 RBM5P52756 815 aaKnown RBP eCLIP13.21□□□□□ -0.29
PSMC6-215ENST00000557517 TTLL12Q14166 644 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-215ENST00000557517 RASA3Q14644 834 aa13.21□□□□□ -0.29
PSMC6-215ENST00000557517 IER5LQ5T953 404 aa13.21□□□□□ -0.29
PSMC6-215ENST00000557517 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.29
PSMC6-215ENST00000557517 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.29
PSMC6-215ENST00000557517 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-215ENST00000557517 MEIS3Q99687 375 aa13.21□□□□□ -0.29
PSMC6-215ENST00000557517 ZNF70Q9UC06 446 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-215ENST00000557517 COLQQ9Y215 455 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-215ENST00000557517 LRRFIP2Q9Y608 721 aaKnown RBP13.21□□□□□ -0.29
PSMC6-215ENST00000557517 PPP1R12BO60237 982 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-215ENST00000557517 FRAT2O75474 233 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-215ENST00000557517 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-215ENST00000557517 BCAR3O75815 825 aa13.2□□□□□ -0.3
PSMC6-215ENST00000557517 GNAI3P08754 354 aa13.2□□□□□ -0.3
PSMC6-215ENST00000557517 TRIM27P14373 513 aa13.2□□□□□ -0.3
PSMC6-215ENST00000557517 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-215ENST00000557517 CRKP46108 304 aa13.2□□□□□ -0.3
PSMC6-215ENST00000557517 MTX1Q13505 466 aa13.2□□□□□ -0.3
PSMC6-215ENST00000557517 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-215ENST00000557517 IFNL1Q8IU54 200 aa13.2□□□□□ -0.3
PSMC6-215ENST00000557517 TDRD3Q9H7E2 651 aaKnown RBP13.2□□□□□ -0.3
PSMC6-215ENST00000557517 CEP126Q9P2H0 1117 aa13.2□□□□□ -0.3
PSMC6-215ENST00000557517 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
PSMC6-215ENST00000557517 IQSEC3Q9UPP2 1182 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-215ENST00000557517 COL1A1P02452 1464 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-215ENST00000557517 PSME4Q14997 1843 aa13.2□□□□□ -0.3
PSMC6-215ENST00000557517 SLC5A1P13866 664 aa13.19□□□□□ -0.3
PSMC6-215ENST00000557517 INHBEP58166 350 aa13.19□□□□□ -0.3
PSMC6-215ENST00000557517 TNFAIP1Q13829 316 aa13.19□□□□□ -0.3
PSMC6-215ENST00000557517 PRKG1Q13976 671 aa13.19□□□□□ -0.3
PSMC6-215ENST00000557517 SPRYD7Q5W111 196 aa13.19□□□□□ -0.3
PSMC6-215ENST00000557517 ATF7IPQ6VMQ6 1270 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms