RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 KAZALD1Q96I82 304 aa9.14□□□□□ -0.95
SCFD1-222ENST00000556768 MXD3Q9BW11 206 aa9.14□□□□□ -0.95
SCFD1-222ENST00000556768 RIPOR2Q9Y4F9 1068 aa9.14□□□□□ -0.95
SCFD1-222ENST00000556768 F8W031 263 aaPredicted RBP9.13□□□□□ -0.95
SCFD1-222ENST00000556768 GNAI3P08754 354 aa9.13□□□□□ -0.95
SCFD1-222ENST00000556768 IFIT1P09914 478 aaKnown RBP9.13□□□□□ -0.95
SCFD1-222ENST00000556768 PRKAR2AP13861 404 aaKnown RBP9.13□□□□□ -0.95
SCFD1-222ENST00000556768 FKBP1AP62942 108 aaKnown RBP9.13□□□□□ -0.95
SCFD1-222ENST00000556768 MKRN3Q13064 507 aaKnown RBP9.13□□□□□ -0.95
SCFD1-222ENST00000556768 TTLL12Q14166 644 aaPredicted RBP9.13□□□□□ -0.95
SCFD1-222ENST00000556768 RGMBQ6NW40 437 aa9.13□□□□□ -0.95
SCFD1-222ENST00000556768 APOBEC3FQ8IUX4 373 aaKnown RBP9.13□□□□□ -0.95
SCFD1-222ENST00000556768 FRAT1Q92837 279 aaPredicted RBP9.13□□□□□ -0.95
SCFD1-222ENST00000556768 CDCA5Q96FF9 252 aa9.13□□□□□ -0.95
SCFD1-222ENST00000556768 PUS3Q9BZE2 481 aaKnown RBP9.13□□□□□ -0.95
SCFD1-222ENST00000556768 PRDM10Q9NQV6 1147 aa9.13□□□□□ -0.95
SCFD1-222ENST00000556768 TAF1P21675 1872 aa9.13□□□□□ -0.95
SCFD1-222ENST00000556768 FOXN1O15353 648 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 MFSD14BQ5SR56 506 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 ANKRD44Q8N8A2 993 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 TBC1D22AQ8WUA7 517 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 FAM84BQ96KN1 310 aaPredicted RBP9.12□□□□□ -0.95
SCFD1-222ENST00000556768 C1orf115Q9H7X2 142 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 LTBP1Q14766 1721 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 GYG1P46976 350 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 PUM3Q15397 648 aaKnown RBP9.12□□□□□ -0.95
SCFD1-222ENST00000556768 LRRC24Q50LG9 513 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 PPP1R15BQ5SWA1 713 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 FAM117AQ9C073 453 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 CEP126Q9P2H0 1117 aa9.12□□□□□ -0.95
SCFD1-222ENST00000556768 ASTN2O75129 1339 aaPredicted RBP9.12□□□□□ -0.95
SCFD1-222ENST00000556768 COL4A1P02462 1669 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 ADAMTSL1Q8N6G6 1762 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 EYA2O00167 538 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 GPR37O15354 613 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 AOC2O75106 756 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 SLC5A1P13866 664 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 LBX1P52954 281 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 DLK2Q6UY11 383 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 ARMC9Q7Z3E5 817 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 MTMR14Q8NCE2 650 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 TDRD7Q8NHU6 1098 aaKnown RBP9.11□□□□□ -0.95
SCFD1-222ENST00000556768 KLHDC4Q8TBB5 520 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 LPIN2Q92539 896 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 GNL3LQ9NVN8 582 aaKnown RBP9.11□□□□□ -0.95
SCFD1-222ENST00000556768 JAG2Q9Y219 1238 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 CACNA1FO60840 1977 aa9.11□□□□□ -0.95
SCFD1-222ENST00000556768 PPP1R12BO60237 982 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-222ENST00000556768 TNFAIP1Q13829 316 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 SUPT20HL1Q3ZLR7 823 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 CFAP100Q494V2 611 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 INTS3Q68E01 1043 aaKnown RBP9.1□□□□□ -0.95
SCFD1-222ENST00000556768 ATF7IPQ6VMQ6 1270 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 FBXO33Q7Z6M2 555 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 DEFB129Q9H1M3 183 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 SERPINA10Q9UK55 444 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 TTF2Q9UNY4 1162 aaKnown RBP9.1□□□□□ -0.95
SCFD1-222ENST00000556768 LRRFIP2Q9Y608 721 aaKnown RBP9.1□□□□□ -0.95
SCFD1-222ENST00000556768 FAM205AQ6ZU69 1335 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 IL15P40933 162 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-222ENST00000556768 PTPN12Q05209 780 aaKnown RBP9.1□□□□□ -0.95
SCFD1-222ENST00000556768 CHAF1AQ13111 956 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-222ENST00000556768 FTSJ3Q8IY81 847 aaKnown RBP9.1□□□□□ -0.95
SCFD1-222ENST00000556768 CERS5Q8N5B7 392 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 SIL1Q9H173 461 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 VEZTQ9HBM0 779 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-222ENST00000556768 PPP2R3BQ9Y5P8 575 aa9.1□□□□□ -0.95
SCFD1-222ENST00000556768 SPDYE16A6NNV3 312 aaPredicted RBP9.09□□□□□ -0.95
SCFD1-222ENST00000556768 DPYSL4O14531 572 aa9.09□□□□□ -0.95
SCFD1-222ENST00000556768 SRGAP3O43295 1099 aa9.09□□□□□ -0.95
SCFD1-222ENST00000556768 CIAO1O76071 339 aa9.09□□□□□ -0.95
SCFD1-222ENST00000556768 GNAI2P04899 355 aa9.09□□□□□ -0.95
SCFD1-222ENST00000556768 BCAMP50895 628 aa9.09□□□□□ -0.95
SCFD1-222ENST00000556768 PRAMEF18Q5VWM3 479 aa9.09□□□□□ -0.95
SCFD1-222ENST00000556768 ZKSCAN2Q63HK3 967 aa9.09□□□□□ -0.95
SCFD1-222ENST00000556768 SCAF8Q9UPN6 1271 aaKnown RBP9.09□□□□□ -0.95
SCFD1-222ENST00000556768 IQSEC3Q9UPP2 1182 aaPredicted RBP9.09□□□□□ -0.95
SCFD1-222ENST00000556768 SUGT1Q9Y2Z0 365 aa9.09□□□□□ -0.95
SCFD1-222ENST00000556768 IRS2Q9Y4H2 1338 aa9.09□□□□□ -0.95
SCFD1-222ENST00000556768 UBE2Q2LH0YL09 131 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 BCAR3O75815 825 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 TRIM27P14373 513 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 TNNI2P48788 182 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 KIF23Q02241 960 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-222ENST00000556768 WDR66Q8TBY9 1149 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 CLUAP1Q96AJ1 413 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 PRMT6Q96LA8 375 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-222ENST00000556768 MEIS3Q99687 375 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 EMILIN3Q9NT22 766 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 AKAP2Q9Y2D5 859 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 MAST3O60307 1309 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 CLRN2A0PK11 232 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 HSPA8P11142 646 aaKnown RBP9.08□□□□□ -0.96
SCFD1-222ENST00000556768 HDLBPQ00341 1268 aaKnown RBP9.08□□□□□ -0.96
SCFD1-222ENST00000556768 PRKG1Q13976 671 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 ATP2B3Q16720 1220 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 DZIP1LQ8IYY4 767 aaKnown RBP9.08□□□□□ -0.96
SCFD1-222ENST00000556768 VGLL2Q8N8G2 317 aa9.08□□□□□ -0.96
SCFD1-222ENST00000556768 TEKT1Q969V4 418 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms